RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 FBLN7Q53RD9 439 aa15.56■□□□□ 0.08
GTF3A-201ENST00000381140 LIAT1Q6ZQX7 453 aa15.56■□□□□ 0.08
GTF3A-201ENST00000381140 Q6ZSV7 163 aa15.56■□□□□ 0.08
GTF3A-201ENST00000381140 HOGA1Q86XE5 327 aa15.56■□□□□ 0.08
GTF3A-201ENST00000381140 OR8H3Q8N146 312 aa15.56■□□□□ 0.08
GTF3A-201ENST00000381140 C3orf56Q8N813 242 aa15.56■□□□□ 0.08
GTF3A-201ENST00000381140 IGHV1-3A0A0C4DH29 117 aa15.55■□□□□ 0.08
GTF3A-201ENST00000381140 IGKV1-6A0A0C4DH72 117 aa15.55■□□□□ 0.08
GTF3A-201ENST00000381140 NAP1L6A6NFF2 107 aa15.55■□□□□ 0.08
GTF3A-201ENST00000381140 CENPXA8MT69 81 aa15.55■□□□□ 0.08
GTF3A-201ENST00000381140 CD74P04233 296 aa15.55■□□□□ 0.08
GTF3A-201ENST00000381140 SNRNP70P08621 437 aaKnown RBP15.55■□□□□ 0.08
GTF3A-201ENST00000381140 TBPP20226 339 aa15.55■□□□□ 0.08
GTF3A-201ENST00000381140 RFX2P48378 723 aa15.55■□□□□ 0.08
GTF3A-201ENST00000381140 TRIM16LQ309B1 348 aa15.55■□□□□ 0.08
GTF3A-201ENST00000381140 IGSF11Q5DX21 431 aa15.55■□□□□ 0.08
GTF3A-201ENST00000381140 TGIF2LXQ8IUE1 241 aa15.55■□□□□ 0.08
GTF3A-201ENST00000381140 CENPSQ8N2Z9 138 aa15.55■□□□□ 0.08
GTF3A-201ENST00000381140 OR4A4PQ8NGN8 299 aa15.55■□□□□ 0.08
GTF3A-201ENST00000381140 OR4C13Q8NGP0 309 aa15.55■□□□□ 0.08
GTF3A-201ENST00000381140 RTN4IP1Q8WWV3 396 aaPredicted RBP15.55■□□□□ 0.08
GTF3A-201ENST00000381140 BEX1Q9HBH7 125 aa15.55■□□□□ 0.08
GTF3A-201ENST00000381140 HRASLSQ9HDD0 168 aa15.55■□□□□ 0.08
GTF3A-201ENST00000381140 IGKV1D-8A0A087WSZ0 117 aa15.54■□□□□ 0.08
GTF3A-201ENST00000381140 AKAIN1P0CW23 69 aa15.54■□□□□ 0.08
GTF3A-201ENST00000381140 FAUP35544 74 aaKnown RBP15.54■□□□□ 0.08
GTF3A-201ENST00000381140 OR3A3P47888 321 aa15.54■□□□□ 0.08
GTF3A-201ENST00000381140 COMPP49747 757 aaPredicted RBP15.54■□□□□ 0.08
GTF3A-201ENST00000381140 ZNF816Q0VGE8 651 aaPredicted RBP15.54■□□□□ 0.08
GTF3A-201ENST00000381140 HNF4GQ14541 408 aa15.54■□□□□ 0.08
GTF3A-201ENST00000381140 HERPUD1Q15011 391 aa15.54■□□□□ 0.08
GTF3A-201ENST00000381140 GVQW1Q8N7I0 195 aa15.54■□□□□ 0.08
GTF3A-201ENST00000381140 ST6GALNAC6Q969X2 333 aa15.54■□□□□ 0.08
GTF3A-201ENST00000381140 NPFFR1Q9GZQ6 430 aa15.54■□□□□ 0.08
GTF3A-201ENST00000381140 ZNF736B4DX44 427 aaPredicted RBP15.53■□□□□ 0.08
GTF3A-201ENST00000381140 FCER2P06734 321 aa15.53■□□□□ 0.08
GTF3A-201ENST00000381140 FAM106CPP0CH98 169 aa15.53■□□□□ 0.08
GTF3A-201ENST00000381140 BTCP35070 178 aa15.53■□□□□ 0.08
GTF3A-201ENST00000381140 SRSF7Q16629 238 aaKnown RBP eCLIP15.53■□□□□ 0.08
GTF3A-201ENST00000381140 ACTBL2Q562R1 376 aa15.53■□□□□ 0.08
GTF3A-201ENST00000381140 LY6G6FQ5SQ64 297 aa15.53■□□□□ 0.08
GTF3A-201ENST00000381140 STEAP1BQ6NZ63 245 aa15.53■□□□□ 0.08
GTF3A-201ENST00000381140 OR10J5Q8NHC4 309 aa15.53■□□□□ 0.08
GTF3A-201ENST00000381140 CFHR4Q92496 578 aa15.53■□□□□ 0.08
GTF3A-201ENST00000381140 SNAPC3Q92966 411 aa15.53■□□□□ 0.08
GTF3A-201ENST00000381140 GINS4Q9BRT9 223 aa15.53■□□□□ 0.08
GTF3A-201ENST00000381140 SLC25A33Q9BSK2 321 aa15.53■□□□□ 0.08
GTF3A-201ENST00000381140 RDH8Q9NYR8 311 aa15.53■□□□□ 0.08
GTF3A-201ENST00000381140 RNF150Q9ULK6 438 aa15.53■□□□□ 0.08
GTF3A-201ENST00000381140 SIGLEC9Q9Y336 463 aa15.53■□□□□ 0.08
GTF3A-201ENST00000381140 HAX1O00165 279 aa15.52■□□□□ 0.08
GTF3A-201ENST00000381140 IGKV1D-33P01593 117 aa15.52■□□□□ 0.08
GTF3A-201ENST00000381140 IGKV1-33P01594 117 aa15.52■□□□□ 0.08
GTF3A-201ENST00000381140 CD3DP04234 171 aa15.52■□□□□ 0.08
GTF3A-201ENST00000381140 SLC6A1P30531 599 aa15.52■□□□□ 0.08
GTF3A-201ENST00000381140 Q6ZS49 121 aa15.52■□□□□ 0.08
GTF3A-201ENST00000381140 NRARPQ7Z6K4 114 aa15.52■□□□□ 0.08
GTF3A-201ENST00000381140 OR4C16Q8NGL9 310 aa15.52■□□□□ 0.08
GTF3A-201ENST00000381140 EDARADDQ8WWZ3 215 aa15.52■□□□□ 0.08
GTF3A-201ENST00000381140 RBMXL1Q96E39 390 aaKnown RBP15.52■□□□□ 0.08
GTF3A-201ENST00000381140 ABHD14BQ96IU4 210 aa15.52■□□□□ 0.08
GTF3A-201ENST00000381140 IFI27L2Q9H2X8 130 aa15.52■□□□□ 0.08
GTF3A-201ENST00000381140 TENM1Q9UKZ4 2725 aa15.51■□□□□ 0.07
GTF3A-201ENST00000381140 SAA2-SAA4A0A096LPE2 208 aa15.51■□□□□ 0.07
GTF3A-201ENST00000381140 CLPSL1A2RUU4 121 aa15.51■□□□□ 0.07
GTF3A-201ENST00000381140 SAA2P0DJI9 122 aaPredicted RBP15.51■□□□□ 0.07
GTF3A-201ENST00000381140 TMEM11P17152 192 aa15.51■□□□□ 0.07
GTF3A-201ENST00000381140 ZNF137PP52743 207 aa15.51■□□□□ 0.07
GTF3A-201ENST00000381140 MEF2DQ14814 521 aa15.51■□□□□ 0.07
GTF3A-201ENST00000381140 ARSJQ5FYB0 599 aaPredicted RBP15.51■□□□□ 0.07
GTF3A-201ENST00000381140 ODF3L1Q8IXM7 274 aa15.51■□□□□ 0.07
GTF3A-201ENST00000381140 DUSP18Q8NEJ0 188 aa15.51■□□□□ 0.07
GTF3A-201ENST00000381140 BEST4Q8NFU0 473 aa15.51■□□□□ 0.07
GTF3A-201ENST00000381140 LINC01006Q8NI28 216 aa15.51■□□□□ 0.07
GTF3A-201ENST00000381140 ENKURQ8TC29 256 aa15.51■□□□□ 0.07
GTF3A-201ENST00000381140 CABLES2Q9BTV7 478 aa15.51■□□□□ 0.07
GTF3A-201ENST00000381140 MRPL20Q9BYC9 149 aaKnown RBP15.51■□□□□ 0.07
GTF3A-201ENST00000381140 RNF114Q9Y508 228 aa15.51■□□□□ 0.07
GTF3A-201ENST00000381140 FAM240BA0A1B0GVZ2 78 aa15.5■□□□□ 0.07
GTF3A-201ENST00000381140 TXNL1O43396 289 aa15.5■□□□□ 0.07
GTF3A-201ENST00000381140 TSPAN9O75954 239 aa15.5■□□□□ 0.07
GTF3A-201ENST00000381140 RAB3DO95716 219 aa15.5■□□□□ 0.07
GTF3A-201ENST00000381140 HLA-DMAP28067 261 aa15.5■□□□□ 0.07
GTF3A-201ENST00000381140 TAS2R46P59540 309 aa15.5■□□□□ 0.07
GTF3A-201ENST00000381140 RPL39P5Q59GN2 51 aa15.5■□□□□ 0.07
GTF3A-201ENST00000381140 Q6ZNX1 250 aa15.5■□□□□ 0.07
GTF3A-201ENST00000381140 AKR1E2Q96JD6 320 aa15.5■□□□□ 0.07
GTF3A-201ENST00000381140 RBM14Q96PK6 669 aaKnown RBP15.5■□□□□ 0.07
GTF3A-201ENST00000381140 TRBV6-7A0A0A0MS04 114 aa15.49■□□□□ 0.07
GTF3A-201ENST00000381140 A0A1B0GUS0 222 aa15.49■□□□□ 0.07
GTF3A-201ENST00000381140 SH2D7A6NKC9 451 aaPredicted RBP15.49■□□□□ 0.07
GTF3A-201ENST00000381140 FAM90A9PA6NNJ1 464 aa15.49■□□□□ 0.07
GTF3A-201ENST00000381140 RAB29O14966 203 aa15.49■□□□□ 0.07
GTF3A-201ENST00000381140 OR2F2O95006 317 aa15.49■□□□□ 0.07
GTF3A-201ENST00000381140 SPNP16150 400 aa15.49■□□□□ 0.07
GTF3A-201ENST00000381140 HABP2Q14520 560 aaPredicted RBP15.49■□□□□ 0.07
GTF3A-201ENST00000381140 RNASE10Q5GAN6 216 aaKnown RBP15.49■□□□□ 0.07
GTF3A-201ENST00000381140 VAX1Q5SQQ9 334 aa15.49■□□□□ 0.07
GTF3A-201ENST00000381140 THNSL2Q86YJ6 484 aa15.49■□□□□ 0.07
GTF3A-201ENST00000381140 OR2T6Q8NHC8 308 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms