RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 ABHD14AQ9BUJ0 271 aa17.73■□□□□ 0.43
GMDS-202ENST00000380815 GAL3ST2Q9H3Q3 398 aa17.73■□□□□ 0.43
GMDS-202ENST00000380815 C11orf1Q9H5F2 150 aa17.73■□□□□ 0.43
GMDS-202ENST00000380815 C19orf12Q9NSK7 152 aa17.73■□□□□ 0.43
GMDS-202ENST00000380815 LINC00862A6NCI5 91 aa17.72■□□□□ 0.43
GMDS-202ENST00000380815 PROP1O75360 226 aa17.72■□□□□ 0.43
GMDS-202ENST00000380815 PVALBP20472 110 aaPredicted RBP17.72■□□□□ 0.43
GMDS-202ENST00000380815 S100A1P23297 94 aa17.72■□□□□ 0.43
GMDS-202ENST00000380815 COL8A2P25067 703 aa17.72■□□□□ 0.43
GMDS-202ENST00000380815 BRWD1-AS2P59051 145 aa17.72■□□□□ 0.43
GMDS-202ENST00000380815 SPAG16Q8N0X2 631 aa17.72■□□□□ 0.43
GMDS-202ENST00000380815 CTSZQ9UBR2 303 aa17.72■□□□□ 0.43
GMDS-202ENST00000380815 LINC00473A8K010 186 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 C17orf98A8MV24 154 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 DVL1O14640 695 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 ATG12O94817 140 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 TPT1P13693 172 aaKnown RBP17.71■□□□□ 0.43
GMDS-202ENST00000380815 EPHA1P21709 976 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 DUTP33316 252 aaKnown RBP17.71■□□□□ 0.43
GMDS-202ENST00000380815 POLR2GP62487 172 aaKnown RBP eCLIP17.71■□□□□ 0.43
GMDS-202ENST00000380815 CD300LFQ8TDQ1 290 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 RPUSD1Q9UJJ7 312 aaKnown RBP17.71■□□□□ 0.43
GMDS-202ENST00000380815 USF3Q68DE3 2245 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 GPR137BO60478 399 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 MMP9P14780 707 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 ZNF273Q14593 569 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 CT45A1Q5HYN5 189 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 UTF1Q5T230 341 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 TMEM200BQ69YZ2 307 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 Q6ZRM9 215 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.71■□□□□ 0.43
GMDS-202ENST00000380815 ZNF439Q8NDP4 499 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 CT45A3Q8NHU0 189 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 CACNG5Q9UF02 275 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 LAMP3Q9UQV4 416 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 MMP24Q9Y5R2 645 aa17.71■□□□□ 0.43
GMDS-202ENST00000380815 CFAP46Q8IYW2 2715 aa17.71■□□□□ 0.42
GMDS-202ENST00000380815 USP24Q9UPU5 2620 aa17.7■□□□□ 0.42
GMDS-202ENST00000380815 SLC31A2O15432 143 aa17.7■□□□□ 0.42
GMDS-202ENST00000380815 IGHV3-7P01780 117 aa17.7■□□□□ 0.42
GMDS-202ENST00000380815 SOD3P08294 240 aa17.7■□□□□ 0.42
GMDS-202ENST00000380815 DANCRP0C864 163 aa17.7■□□□□ 0.42
GMDS-202ENST00000380815 NFYBP25208 207 aa17.7■□□□□ 0.42
GMDS-202ENST00000380815 TMEM33P57088 247 aa17.7■□□□□ 0.42
GMDS-202ENST00000380815 OR2B11Q5JQS5 317 aa17.7■□□□□ 0.42
GMDS-202ENST00000380815 DTX2Q86UW9 622 aa17.7■□□□□ 0.42
GMDS-202ENST00000380815 BAP18Q8IXM2 172 aa17.7■□□□□ 0.42
GMDS-202ENST00000380815 ZNF714Q96N38 554 aa17.7■□□□□ 0.42
GMDS-202ENST00000380815 COA4Q9NYJ1 87 aa17.7■□□□□ 0.42
GMDS-202ENST00000380815 KIAA1324LA8MWY0 1029 aaPredicted RBP17.69■□□□□ 0.42
GMDS-202ENST00000380815 LYNX1G3V0Z9 82 aa17.69■□□□□ 0.42
GMDS-202ENST00000380815 MMP23AO75900 390 aa17.69■□□□□ 0.42
GMDS-202ENST00000380815 LYNX1P0DP58 116 aa17.69■□□□□ 0.42
GMDS-202ENST00000380815 IGFBP2P18065 325 aa17.69■□□□□ 0.42
GMDS-202ENST00000380815 MRPS11P82912 194 aaKnown RBP17.69■□□□□ 0.42
GMDS-202ENST00000380815 PRAMEF5Q5TYX0 476 aa17.69■□□□□ 0.42
GMDS-202ENST00000380815 PCNPQ8WW12 178 aaKnown RBP17.69■□□□□ 0.42
GMDS-202ENST00000380815 LEAP2Q969E1 77 aa17.69■□□□□ 0.42
GMDS-202ENST00000380815 MAGT1Q9H0U3 335 aa17.69■□□□□ 0.42
GMDS-202ENST00000380815 SSSCA1O60232 199 aa17.68■□□□□ 0.42
GMDS-202ENST00000380815 NMBP08949 121 aa17.68■□□□□ 0.42
GMDS-202ENST00000380815 ZNF816Q0VGE8 651 aaPredicted RBP17.68■□□□□ 0.42
GMDS-202ENST00000380815 IZUMO4Q1ZYL8 232 aa17.68■□□□□ 0.42
GMDS-202ENST00000380815 HEPN1Q6WQI6 88 aa17.68■□□□□ 0.42
GMDS-202ENST00000380815 NEU4Q8WWR8 484 aaPredicted RBP17.68■□□□□ 0.42
GMDS-202ENST00000380815 H1FXQ92522 213 aaKnown RBP17.68■□□□□ 0.42
GMDS-202ENST00000380815 SLC25A32Q9H2D1 315 aa17.68■□□□□ 0.42
GMDS-202ENST00000380815 FBXL17Q9UF56 701 aa17.68■□□□□ 0.42
GMDS-202ENST00000380815 AUP1Q9Y679 476 aa17.68■□□□□ 0.42
GMDS-202ENST00000380815 C19orf84I3L1E1 186 aa17.68■□□□□ 0.42
GMDS-202ENST00000380815 M0R1X1 148 aa17.68■□□□□ 0.42
GMDS-202ENST00000380815 RAB29O14966 203 aa17.68■□□□□ 0.42
GMDS-202ENST00000380815 S1PR2O95136 353 aa17.68■□□□□ 0.42
GMDS-202ENST00000380815 IGHV2-70P01814 119 aa17.68■□□□□ 0.42
GMDS-202ENST00000380815 P0C879 139 aa17.68■□□□□ 0.42
GMDS-202ENST00000380815 EIF5AP63241 154 aaKnown RBP17.68■□□□□ 0.42
GMDS-202ENST00000380815 RPL39P5Q59GN2 51 aa17.68■□□□□ 0.42
GMDS-202ENST00000380815 NCR3LG1Q68D85 454 aa17.68■□□□□ 0.42
GMDS-202ENST00000380815 OR2C3Q8N628 320 aa17.68■□□□□ 0.42
GMDS-202ENST00000380815 LYRM2Q9NU23 88 aaPredicted RBP17.68■□□□□ 0.42
GMDS-202ENST00000380815 WRBO00258 174 aa17.67■□□□□ 0.42
GMDS-202ENST00000380815 KRASP01116 189 aa17.67■□□□□ 0.42
GMDS-202ENST00000380815 GAPDHP04406 335 aaKnown RBP17.67■□□□□ 0.42
GMDS-202ENST00000380815 DAOP14920 347 aa17.67■□□□□ 0.42
GMDS-202ENST00000380815 LINC00205P59089 165 aa17.67■□□□□ 0.42
GMDS-202ENST00000380815 VAMP2P63027 116 aa17.67■□□□□ 0.42
GMDS-202ENST00000380815 SLC25A48Q6ZT89 311 aaKnown RBP17.67■□□□□ 0.42
GMDS-202ENST00000380815 A0A1W2PPR1 153 aa17.66■□□□□ 0.42
GMDS-202ENST00000380815 RBFOX2O43251 390 aaKnown RBP eCLIP17.66■□□□□ 0.429e-7■■■■■ 35.2
GMDS-202ENST00000380815 CHST1O43916 411 aa17.66■□□□□ 0.42
GMDS-202ENST00000380815 ODF3L1Q8IXM7 274 aa17.66■□□□□ 0.42
GMDS-202ENST00000380815 CACNA1BQ00975 2339 aa17.66■□□□□ 0.42
GMDS-202ENST00000380815 SAA2-SAA4A0A096LPE2 208 aa17.66■□□□□ 0.42
GMDS-202ENST00000380815 TRBV23-1A0A0A0MS06 115 aa17.66■□□□□ 0.42
GMDS-202ENST00000380815 A0A1W2PPE3 182 aa17.66■□□□□ 0.42
GMDS-202ENST00000380815 B8ZZF3 427 aa17.66■□□□□ 0.42
GMDS-202ENST00000380815 JTBO76095 146 aa17.66■□□□□ 0.42
GMDS-202ENST00000380815 SAA2P0DJI9 122 aaPredicted RBP17.66■□□□□ 0.42
GMDS-202ENST00000380815 CCL3L1P16619 93 aa17.66■□□□□ 0.42
GMDS-202ENST00000380815 G6PCP35575 357 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms