RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 KITLGP21583 273 aa16.77■□□□□ 0.28
EBF1-202ENST00000380654 RPS16P62249 146 aaKnown RBP16.77■□□□□ 0.28
EBF1-202ENST00000380654 SLC38A11Q08AI6 406 aa16.77■□□□□ 0.28
EBF1-202ENST00000380654 KHDC3LQ587J8 217 aa16.77■□□□□ 0.28
EBF1-202ENST00000380654 ZNF787Q6DD87 383 aa16.77■□□□□ 0.28
EBF1-202ENST00000380654 ZNF343Q6P1L6 599 aa16.77■□□□□ 0.28
EBF1-202ENST00000380654 RBMS3Q6XE24 437 aaKnown RBP16.77■□□□□ 0.28
EBF1-202ENST00000380654 TCTEX1D2Q8WW35 142 aa16.77■□□□□ 0.28
EBF1-202ENST00000380654 NINJ1Q92982 152 aa16.77■□□□□ 0.28
EBF1-202ENST00000380654 RCC1LQ96I51 464 aaKnown RBP16.77■□□□□ 0.28
EBF1-202ENST00000380654 TRAV1-1A0A0B4J248 108 aa16.76■□□□□ 0.27
EBF1-202ENST00000380654 P0C879 139 aa16.76■□□□□ 0.27
EBF1-202ENST00000380654 MEOX2P50222 304 aa16.76■□□□□ 0.27
EBF1-202ENST00000380654 LTC4SQ16873 150 aa16.76■□□□□ 0.27
EBF1-202ENST00000380654 CD177Q8N6Q3 437 aa16.76■□□□□ 0.27
EBF1-202ENST00000380654 C1orf162Q8NEQ5 155 aaPredicted RBP16.76■□□□□ 0.27
EBF1-202ENST00000380654 PLPPR2Q96GM1 343 aa16.76■□□□□ 0.27
EBF1-202ENST00000380654 PLSCR4Q9NRQ2 329 aa16.76■□□□□ 0.27
EBF1-202ENST00000380654 PTPRBP23467 1997 aa16.76■□□□□ 0.27
EBF1-202ENST00000380654 GCH1P30793 250 aa16.76■□□□□ 0.27
EBF1-202ENST00000380654 MSMPQ1L6U9 139 aa16.76■□□□□ 0.27
EBF1-202ENST00000380654 ZNF718Q3SXZ3 478 aa16.76■□□□□ 0.27
EBF1-202ENST00000380654 ZDHHC16Q969W1 377 aa16.76■□□□□ 0.27
EBF1-202ENST00000380654 STARD4Q96DR4 205 aa16.76■□□□□ 0.27
EBF1-202ENST00000380654 NIPSNAP3BQ9BS92 247 aa16.76■□□□□ 0.27
EBF1-202ENST00000380654 PSMG3Q9BT73 122 aaPredicted RBP16.76■□□□□ 0.27
EBF1-202ENST00000380654 HSPB7Q9UBY9 170 aa16.76■□□□□ 0.27
EBF1-202ENST00000380654 LINC00473A8K010 186 aa16.75■□□□□ 0.27
EBF1-202ENST00000380654 ST8SIA5O15466 376 aa16.75■□□□□ 0.27
EBF1-202ENST00000380654 IGLV1-44P01699 117 aa16.75■□□□□ 0.27
EBF1-202ENST00000380654 RAB11AP62491 216 aa16.75■□□□□ 0.27
EBF1-202ENST00000380654 EDDM3AQ14507 147 aa16.75■□□□□ 0.27
EBF1-202ENST00000380654 SPINK9Q5DT21 86 aa16.75■□□□□ 0.27
EBF1-202ENST00000380654 TMEM14EPQ6UXP3 125 aa16.75■□□□□ 0.27
EBF1-202ENST00000380654 PRR7Q8TB68 274 aa16.75■□□□□ 0.27
EBF1-202ENST00000380654 LRRC29Q8WV35 223 aa16.75■□□□□ 0.27
EBF1-202ENST00000380654 ZNF71Q9NQZ8 489 aaPredicted RBP16.75■□□□□ 0.27
EBF1-202ENST00000380654 URGCP-MRPS24S4R325 110 aa16.75■□□□□ 0.27
EBF1-202ENST00000380654 FAM90A26D6RGX4 464 aa16.75■□□□□ 0.27
EBF1-202ENST00000380654 HEPN1Q6WQI6 88 aa16.75■□□□□ 0.27
EBF1-202ENST00000380654 LRP11Q86VZ4 500 aa16.75■□□□□ 0.27
EBF1-202ENST00000380654 ZBTB34Q8NCN2 500 aa16.75■□□□□ 0.27
EBF1-202ENST00000380654 TAF15Q92804 592 aaKnown RBP eCLIP16.75■□□□□ 0.27
EBF1-202ENST00000380654 TVP23CQ96ET8 276 aa16.75■□□□□ 0.27
EBF1-202ENST00000380654 LRRC30A6NM36 301 aa16.74■□□□□ 0.27
EBF1-202ENST00000380654 UBE2CO00762 179 aa16.74■□□□□ 0.27
EBF1-202ENST00000380654 IGKV1D-33P01593 117 aa16.74■□□□□ 0.27
EBF1-202ENST00000380654 IGKV1-33P01594 117 aa16.74■□□□□ 0.27
EBF1-202ENST00000380654 EGR1P18146 543 aa16.74■□□□□ 0.27
EBF1-202ENST00000380654 FABP9Q0Z7S8 132 aa16.74■□□□□ 0.27
EBF1-202ENST00000380654 SMIM21Q3B7S5 101 aa16.74■□□□□ 0.27
EBF1-202ENST00000380654 BEND4Q6ZU67 534 aa16.74■□□□□ 0.27
EBF1-202ENST00000380654 SEM1Q6ZVN7 128 aa16.74■□□□□ 0.27
EBF1-202ENST00000380654 OR2Z1Q8NG97 314 aa16.74■□□□□ 0.27
EBF1-202ENST00000380654 PSG11Q9UQ72 335 aa16.74■□□□□ 0.27
EBF1-202ENST00000380654 ZG16O60844 167 aa16.74■□□□□ 0.27
EBF1-202ENST00000380654 BCL2P10415 239 aa16.74■□□□□ 0.27
EBF1-202ENST00000380654 Q3ZCU0 254 aa16.74■□□□□ 0.27
EBF1-202ENST00000380654 FAM90A2PQ658T7 463 aa16.74■□□□□ 0.27
EBF1-202ENST00000380654 MBD3L1Q8WWY6 194 aa16.74■□□□□ 0.27
EBF1-202ENST00000380654 CGAP01215 116 aa16.73■□□□□ 0.27
EBF1-202ENST00000380654 MAS1LP35410 378 aa16.73■□□□□ 0.27
EBF1-202ENST00000380654 CATR1Q13166 79 aa16.73■□□□□ 0.27
EBF1-202ENST00000380654 SPRNQ5BIV9 151 aa16.73■□□□□ 0.27
EBF1-202ENST00000380654 MALSU1Q96EH3 234 aa16.73■□□□□ 0.27
EBF1-202ENST00000380654 PROCRQ9UNN8 238 aa16.73■□□□□ 0.27
EBF1-202ENST00000380654 ICE1Q9Y2F5 2266 aa16.73■□□□□ 0.27
EBF1-202ENST00000380654 HMGB3O15347 200 aaKnown RBP16.73■□□□□ 0.27
EBF1-202ENST00000380654 CXCL1P09341 107 aa16.73■□□□□ 0.27
EBF1-202ENST00000380654 OR8U8P0C7N1 319 aa16.73■□□□□ 0.27
EBF1-202ENST00000380654 NQO2P16083 231 aa16.73■□□□□ 0.27
EBF1-202ENST00000380654 SERF2P84101 59 aa16.73■□□□□ 0.27
EBF1-202ENST00000380654 TLE1Q04724 770 aa16.73■□□□□ 0.27
EBF1-202ENST00000380654 TMEM41BQ5BJD5 291 aa16.73■□□□□ 0.27
EBF1-202ENST00000380654 MBNL2Q5VZF2 373 aaKnown RBP16.73■□□□□ 0.27
EBF1-202ENST00000380654 BHLHA15Q7RTS1 189 aaPredicted RBP16.73■□□□□ 0.27
EBF1-202ENST00000380654 Q8WTZ3 238 aa16.73■□□□□ 0.27
EBF1-202ENST00000380654 TOLLIPQ9H0E2 274 aa16.73■□□□□ 0.27
EBF1-202ENST00000380654 DUSP13Q9UII6 198 aa16.73■□□□□ 0.27
EBF1-202ENST00000380654 RPS10P46783 165 aaKnown RBP16.72■□□□□ 0.27
EBF1-202ENST00000380654 ERVFRD-1P60508 538 aa16.72■□□□□ 0.27
EBF1-202ENST00000380654 MSMO1Q15800 293 aa16.72■□□□□ 0.27
EBF1-202ENST00000380654 RPP25LQ8N5L8 163 aaKnown RBP16.72■□□□□ 0.27
EBF1-202ENST00000380654 AGMATQ9BSE5 352 aa16.72■□□□□ 0.27
EBF1-202ENST00000380654 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.72■□□□□ 0.27
EBF1-202ENST00000380654 CISD1Q9NZ45 108 aaKnown RBP16.72■□□□□ 0.27
EBF1-202ENST00000380654 C15orf65H3BRN8 121 aa16.71■□□□□ 0.27
EBF1-202ENST00000380654 IGHV2-5P01817 119 aa16.71■□□□□ 0.27
EBF1-202ENST00000380654 PRDX2P32119 198 aa16.71■□□□□ 0.27
EBF1-202ENST00000380654 ELOBQ15370 118 aa16.71■□□□□ 0.27
EBF1-202ENST00000380654 HCFC1P51610 2035 aa16.71■□□□□ 0.27
EBF1-202ENST00000380654 IGHV3OR15-7A0A075B7D8 119 aa16.71■□□□□ 0.27
EBF1-202ENST00000380654 MAP1LC3B2A6NCE7 125 aa16.71■□□□□ 0.27
EBF1-202ENST00000380654 IFNL4K9M1U5 179 aa16.71■□□□□ 0.27
EBF1-202ENST00000380654 RBMXL2O75526 392 aaKnown RBP16.71■□□□□ 0.27
EBF1-202ENST00000380654 IGHV3-13P01766 116 aa16.71■□□□□ 0.27
EBF1-202ENST00000380654 IGHV3-7P01780 117 aa16.71■□□□□ 0.27
EBF1-202ENST00000380654 ACSM6Q6P461 480 aa16.71■□□□□ 0.27
EBF1-202ENST00000380654 RPRMLQ8N4K4 120 aa16.71■□□□□ 0.27
EBF1-202ENST00000380654 CA5BP1Q8WTZ4 195 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms