RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 ABHD12Q8N2K0 398 aa20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 OR10X1Q8NGY0 326 aa20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 TCTEX1D2Q8WW35 142 aa20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 RBPMSQ93062 196 aaKnown RBP20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 C5orf30Q96GV9 206 aa20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 C18orf12Q96KH6 178 aa20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 CHIAQ9BZP6 476 aa20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 PRR13Q9NZ81 148 aa20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 IGHV4-30-2A0A087WSY4 118 aa20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 SAA2-SAA4A0A096LPE2 208 aa20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 IGHV2-70DA0A0C4DH43 119 aa20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 FAM25EA8MYX2 175 aa20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 SAA2P0DJI9 122 aaPredicted RBP20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 ZNF16P17020 682 aaPredicted RBP20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 KIR2DS2P43631 304 aa20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 TMEM268Q5VZI3 342 aa20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 OR13D1Q8NGV5 346 aa20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 GPHA2Q96T91 129 aa20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 CLEC7AQ9BXN2 247 aa20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 RANBP3Q9H6Z4 567 aaPredicted RBP20.09■□□□□ 0.81
ECHDC3-201ENST00000379215 IGHV4-61A0A0C4DH41 118 aa20.08■□□□□ 0.8
ECHDC3-201ENST00000379215 A0A1W2PPE3 182 aa20.08■□□□□ 0.8
ECHDC3-201ENST00000379215 M0R1X1 148 aa20.08■□□□□ 0.8
ECHDC3-201ENST00000379215 ATG12O94817 140 aa20.08■□□□□ 0.8
ECHDC3-201ENST00000379215 SIX6O95475 246 aa20.08■□□□□ 0.8
ECHDC3-201ENST00000379215 C1QBP02746 253 aa20.08■□□□□ 0.8
ECHDC3-201ENST00000379215 HOXB5P09067 269 aa20.08■□□□□ 0.8
ECHDC3-201ENST00000379215 ZFP36P26651 326 aaKnown RBP20.08■□□□□ 0.8
ECHDC3-201ENST00000379215 DUTP33316 252 aaKnown RBP20.08■□□□□ 0.8
ECHDC3-201ENST00000379215 BTNL3Q6UXE8 466 aa20.08■□□□□ 0.8
ECHDC3-201ENST00000379215 OR2T35Q8NGX2 323 aa20.08■□□□□ 0.8
ECHDC3-201ENST00000379215 TMEM186Q96B77 213 aa20.08■□□□□ 0.8
ECHDC3-201ENST00000379215 PRELID3BQ9Y3B1 194 aa20.08■□□□□ 0.8
ECHDC3-201ENST00000379215 HELZ2Q9BYK8 2649 aaKnown RBP20.08■□□□□ 0.8
ECHDC3-201ENST00000379215 IGHV2-26A0A0B4J1V2 119 aa20.07■□□□□ 0.8
ECHDC3-201ENST00000379215 BOLA2-SMG1P6H3BVE0 249 aa20.07■□□□□ 0.8
ECHDC3-201ENST00000379215 CCSO14618 274 aa20.07■□□□□ 0.8
ECHDC3-201ENST00000379215 ADAP1O75689 374 aa20.07■□□□□ 0.8
ECHDC3-201ENST00000379215 THBS3P49746 956 aa20.07■□□□□ 0.8
ECHDC3-201ENST00000379215 LCN2P80188 198 aa20.07■□□□□ 0.8
ECHDC3-201ENST00000379215 UTF1Q5T230 341 aa20.07■□□□□ 0.8
ECHDC3-201ENST00000379215 DCAF12L2Q5VW00 463 aa20.07■□□□□ 0.8
ECHDC3-201ENST00000379215 ODF3L1Q8IXM7 274 aa20.07■□□□□ 0.8
ECHDC3-201ENST00000379215 BEND2Q8NDZ0 799 aa20.07■□□□□ 0.8
ECHDC3-201ENST00000379215 NMES1Q9C002 83 aa20.07■□□□□ 0.8
ECHDC3-201ENST00000379215 AMMECR1Q9Y4X0 333 aaPredicted RBP20.07■□□□□ 0.8
ECHDC3-201ENST00000379215 C13orf42A0A1B0GVH6 325 aa20.06■□□□□ 0.8
ECHDC3-201ENST00000379215 PRTN3P24158 256 aa20.06■□□□□ 0.8
ECHDC3-201ENST00000379215 ZNF137PP52743 207 aa20.06■□□□□ 0.8
ECHDC3-201ENST00000379215 ARF6P62330 175 aa20.06■□□□□ 0.8
ECHDC3-201ENST00000379215 FGL1Q08830 312 aa20.06■□□□□ 0.8
ECHDC3-201ENST00000379215 RPL39P5Q59GN2 51 aa20.06■□□□□ 0.8
ECHDC3-201ENST00000379215 SELENOHQ8IZQ5 122 aaKnown RBP20.06■□□□□ 0.8
ECHDC3-201ENST00000379215 SLC35G3Q8N808 338 aa20.06■□□□□ 0.8
ECHDC3-201ENST00000379215 SPIN2AQ99865 258 aa20.06■□□□□ 0.8
ECHDC3-201ENST00000379215 SPIN2BQ9BPZ2 258 aa20.06■□□□□ 0.8
ECHDC3-201ENST00000379215 HEXA-AS1Q9H8Q6 139 aa20.06■□□□□ 0.8
ECHDC3-201ENST00000379215 UNKLQ9H9P5 680 aaKnown RBP20.06■□□□□ 0.8
ECHDC3-201ENST00000379215 DOCK11Q5JSL3 2073 aa20.06■□□□□ 0.8
ECHDC3-201ENST00000379215 RBFOX2O43251 390 aaKnown RBP eCLIP20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 VDAC1P21796 283 aa20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 PAX2Q02962 417 aa20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 GGNBP1Q5YKI7 109 aa20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 ZNF833PQ6ZTB9 187 aa20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 LHFPL5Q8TAF8 219 aa20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 C2orf50Q96LR7 162 aa20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 ZNF251Q9BRH9 671 aa20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 COMMD9Q9P000 198 aa20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 DOPEY2Q9Y3R5 2298 aa20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 USF1P22415 310 aaPredicted RBP20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 EIF2B2P49770 351 aaKnown RBP20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 RPL30P62888 115 aaKnown RBP20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 TAGLNQ01995 201 aaKnown RBP20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 LYZL2Q7Z4W2 148 aa20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 SPAG16Q8N0X2 631 aa20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 Q8N7P7 452 aa20.05■□□□□ 0.8
ECHDC3-201ENST00000379215 PROP1O75360 226 aa20.04■□□□□ 0.8
ECHDC3-201ENST00000379215 HYLS1Q96M11 299 aa20.04■□□□□ 0.8
ECHDC3-201ENST00000379215 LINC00473A8K010 186 aa20.03■□□□□ 0.8
ECHDC3-201ENST00000379215 HLA-DRB5Q30154 266 aa20.03■□□□□ 0.8
ECHDC3-201ENST00000379215 NCR3LG1Q68D85 454 aa20.03■□□□□ 0.8
ECHDC3-201ENST00000379215 PRSS57Q6UWY2 283 aa20.03■□□□□ 0.8
ECHDC3-201ENST00000379215 NOXA1Q86UR1 476 aa20.03■□□□□ 0.8
ECHDC3-201ENST00000379215 IGLV1-47P01700 117 aa20.02■□□□□ 0.8
ECHDC3-201ENST00000379215 IAH1Q2TAA2 248 aaPredicted RBP20.02■□□□□ 0.8
ECHDC3-201ENST00000379215 ZNF585BQ52M93 769 aa20.02■□□□□ 0.8
ECHDC3-201ENST00000379215 OR11H6Q8NGC7 330 aa20.02■□□□□ 0.8
ECHDC3-201ENST00000379215 LSM10Q969L4 123 aaKnown RBP20.02■□□□□ 0.8
ECHDC3-201ENST00000379215 YLPM1P49750 1951 aaKnown RBP20.02■□□□□ 0.8
ECHDC3-201ENST00000379215 ARID1AO14497 2285 aa20.02■□□□□ 0.79
ECHDC3-201ENST00000379215 LPAR6P43657 344 aa20.02■□□□□ 0.79
ECHDC3-201ENST00000379215 GZMKP49863 264 aa20.02■□□□□ 0.79
ECHDC3-201ENST00000379215 DVL1P1P54792 670 aaPredicted RBP20.02■□□□□ 0.79
ECHDC3-201ENST00000379215 THOC7Q6I9Y2 204 aaKnown RBP20.02■□□□□ 0.79
ECHDC3-201ENST00000379215 OR4S2Q8NH73 311 aa20.02■□□□□ 0.79
ECHDC3-201ENST00000379215 RNASE11Q8TAA1 199 aaKnown RBP20.02■□□□□ 0.79
ECHDC3-201ENST00000379215 SEC22AQ96IW7 307 aa20.02■□□□□ 0.79
ECHDC3-201ENST00000379215 ZFP57Q9NU63 452 aa20.02■□□□□ 0.79
ECHDC3-201ENST00000379215 FAM157AC9JC47 383 aa20.01■□□□□ 0.79
ECHDC3-201ENST00000379215 TXNL1O43396 289 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms