RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 TRAV40A0A0B4J280 105 aa12.82□□□□□ -0.36
CCDC107-204ENST00000378409 CENPVL3A0A0U1RRI6 287 aa12.82□□□□□ -0.36
CCDC107-204ENST00000378409 BUB1B-PAK6H3BSN5 160 aa12.82□□□□□ -0.36
CCDC107-204ENST00000378409 M0R1X1 148 aa12.82□□□□□ -0.36
CCDC107-204ENST00000378409 VSIG10L2P0DP72 767 aa12.82□□□□□ -0.36
CCDC107-204ENST00000378409 RAG2P55895 527 aa12.82□□□□□ -0.36
CCDC107-204ENST00000378409 RND3P61587 244 aa12.82□□□□□ -0.36
CCDC107-204ENST00000378409 C1orf229Q6ZS94 237 aaPredicted RBP12.82□□□□□ -0.36
CCDC107-204ENST00000378409 TBC1D26Q86UD7 250 aa12.82□□□□□ -0.36
CCDC107-204ENST00000378409 RTN4IP1Q8WWV3 396 aaPredicted RBP12.82□□□□□ -0.36
CCDC107-204ENST00000378409 GAB2Q9UQC2 676 aa12.82□□□□□ -0.36
CCDC107-204ENST00000378409 AKAP9Q99996 3911 aa12.81□□□□□ -0.36
CCDC107-204ENST00000378409 TEX13DA0A0J9YY54 714 aaPredicted RBP12.81□□□□□ -0.36
CCDC107-204ENST00000378409 MPPED1O15442 326 aa12.81□□□□□ -0.36
CCDC107-204ENST00000378409 PGLYRP1O75594 196 aaPredicted RBP12.81□□□□□ -0.36
CCDC107-204ENST00000378409 AVPP01185 164 aa12.81□□□□□ -0.36
CCDC107-204ENST00000378409 OR4E1P0C645 316 aa12.81□□□□□ -0.36
CCDC107-204ENST00000378409 HTR1DP28221 377 aa12.81□□□□□ -0.36
CCDC107-204ENST00000378409 MECP2P51608 486 aaKnown RBP12.81□□□□□ -0.36
CCDC107-204ENST00000378409 LGALS4P56470 323 aa12.81□□□□□ -0.36
CCDC107-204ENST00000378409 C4orf46Q504U0 113 aa12.81□□□□□ -0.36
CCDC107-204ENST00000378409 TMEM128Q5BJH2 165 aa12.81□□□□□ -0.36
CCDC107-204ENST00000378409 GPR157Q5UAW9 335 aa12.81□□□□□ -0.36
CCDC107-204ENST00000378409 Q6ZNX1 250 aa12.81□□□□□ -0.36
CCDC107-204ENST00000378409 ZNF833PQ6ZTB9 187 aa12.81□□□□□ -0.36
CCDC107-204ENST00000378409 SGPP2Q8IWX5 399 aa12.81□□□□□ -0.36
CCDC107-204ENST00000378409 OR51H1Q8NH63 302 aa12.81□□□□□ -0.36
CCDC107-204ENST00000378409 ZNF251Q9BRH9 671 aa12.81□□□□□ -0.36
CCDC107-204ENST00000378409 SEC22CQ9BRL7 303 aa12.81□□□□□ -0.36
CCDC107-204ENST00000378409 NAA60Q9H7X0 242 aa12.81□□□□□ -0.36
CCDC107-204ENST00000378409 ACANP16112 2415 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 IGHV1-69DA0A0B4J2H0 117 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 CRYM-AS1A6NIL9 109 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 LEUTXA8MZ59 168 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 NPFFO15130 113 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 PROP1O75360 226 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 IGHV1-69P01742 117 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 IGHV4-38-2P0DP08 117 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 VAMP1P23763 118 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 REG1BP48304 166 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 ZNF137PP52743 207 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 UBE2MP61081 183 aaKnown RBP12.8□□□□□ -0.36
CCDC107-204ENST00000378409 PPP1R1AQ13522 171 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 EIF4EBP1Q13541 118 aaPredicted RBP12.8□□□□□ -0.36
CCDC107-204ENST00000378409 DIAPH2-AS1Q14236 149 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 TATDN3Q17R31 274 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 LHFPL4Q7Z7J7 247 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 DRAXINQ8NBI3 349 aaPredicted RBP12.8□□□□□ -0.36
CCDC107-204ENST00000378409 TCTEX1D2Q8WW35 142 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 ST6GALNAC6Q969X2 333 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 C18orf12Q96KH6 178 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 ALX4Q9H161 411 aaPredicted RBP12.8□□□□□ -0.36
CCDC107-204ENST00000378409 CSPG4Q6UVK1 2322 aa12.8□□□□□ -0.36
CCDC107-204ENST00000378409 A0A0B4J293 547 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 RNF212BA8MTL3 300 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 CD5LO43866 347 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 PRAF2O60831 178 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 HLA-AP01891 365 aaKnown RBP12.79□□□□□ -0.36
CCDC107-204ENST00000378409 IL5P05113 134 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 SAA4P35542 130 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 CEACAM3P40198 252 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 RPL30P62888 115 aaKnown RBP12.79□□□□□ -0.36
CCDC107-204ENST00000378409 SUPT4H1P63272 117 aaKnown RBP12.79□□□□□ -0.36
CCDC107-204ENST00000378409 DHODHQ02127 395 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 KRTAP1-1Q07627 177 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 CATR1Q13166 79 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 DHRS2Q13268 280 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 SLC9A3R2Q15599 337 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 LDLRAD2Q5SZI1 272 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 TPTE2P1Q5T6R2 138 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 RUSC1-AS1Q66K80 236 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 FAM71F2Q6NXP2 309 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 C11orf88Q6PI97 169 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 GLDNQ6ZMI3 551 aaPredicted RBP12.79□□□□□ -0.36
CCDC107-204ENST00000378409 ZNF66Q6ZN08 573 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 KCTD9Q7L273 389 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 TGIF2LXQ8IUE1 241 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 OR52B4Q8NGK2 314 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 RPEQ96AT9 228 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 HSD17B10Q99714 261 aaKnown RBP12.79□□□□□ -0.36
CCDC107-204ENST00000378409 MRPL20Q9BYC9 149 aaKnown RBP12.79□□□□□ -0.36
CCDC107-204ENST00000378409 LIN7CQ9NUP9 197 aaKnown RBP12.79□□□□□ -0.36
CCDC107-204ENST00000378409 DPM3Q9P2X0 92 aa12.79□□□□□ -0.36
CCDC107-204ENST00000378409 TBL2Q9Y4P3 447 aaKnown RBP12.79□□□□□ -0.36
CCDC107-204ENST00000378409 TLN2Q9Y4G6 2542 aa12.78□□□□□ -0.36
CCDC107-204ENST00000378409 C3orf85A0A1B0GTC6 90 aa12.78□□□□□ -0.36
CCDC107-204ENST00000378409 C9orf170A2RU37 121 aa12.78□□□□□ -0.36
CCDC107-204ENST00000378409 LINC00473A8K010 186 aa12.78□□□□□ -0.36
CCDC107-204ENST00000378409 LY6LH3BQJ8 138 aa12.78□□□□□ -0.36
CCDC107-204ENST00000378409 IFNA2P01563 188 aa12.78□□□□□ -0.36
CCDC107-204ENST00000378409 GAPDHP04406 335 aaKnown RBP12.78□□□□□ -0.36
CCDC107-204ENST00000378409 OR5AC1P0C628 307 aa12.78□□□□□ -0.36
CCDC107-204ENST00000378409 F2RP25116 425 aa12.78□□□□□ -0.36
CCDC107-204ENST00000378409 DUTP33316 252 aaKnown RBP12.78□□□□□ -0.36
CCDC107-204ENST00000378409 THBS3P49746 956 aa12.78□□□□□ -0.36
CCDC107-204ENST00000378409 LINC00205P59089 165 aa12.78□□□□□ -0.36
CCDC107-204ENST00000378409 CBX3Q13185 183 aa12.78□□□□□ -0.36
CCDC107-204ENST00000378409 MIDNQ504T8 468 aa12.78□□□□□ -0.36
CCDC107-204ENST00000378409 OR2B11Q5JQS5 317 aa12.78□□□□□ -0.36
CCDC107-204ENST00000378409 KLF17Q5JT82 389 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms