RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 C5orf64Q2M2E5 130 aa12.06□□□□□ -0.48
RAB4B-202ENST00000378307 C8orf86Q6ZUL3 223 aa12.06□□□□□ -0.48
RAB4B-202ENST00000378307 OR5AN1Q8NGI8 311 aa12.06□□□□□ -0.48
RAB4B-202ENST00000378307 EDARADDQ8WWZ3 215 aa12.06□□□□□ -0.48
RAB4B-202ENST00000378307 PHF21AQ96BD5 680 aa12.06□□□□□ -0.48
RAB4B-202ENST00000378307 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.06□□□□□ -0.48
RAB4B-202ENST00000378307 IGHV7-81A0A0B4J1V7 117 aa12.05□□□□□ -0.48
RAB4B-202ENST00000378307 G3V318 75 aa12.05□□□□□ -0.48
RAB4B-202ENST00000378307 FCN1O00602 326 aa12.05□□□□□ -0.48
RAB4B-202ENST00000378307 HLA-DRB1P01911 266 aa12.05□□□□□ -0.48
RAB4B-202ENST00000378307 OR8U9P0C7N5 309 aa12.05□□□□□ -0.48
RAB4B-202ENST00000378307 NDPQ00604 133 aa12.05□□□□□ -0.48
RAB4B-202ENST00000378307 ARFRP1Q13795 201 aa12.05□□□□□ -0.48
RAB4B-202ENST00000378307 ZNF260Q3ZCT1 412 aa12.05□□□□□ -0.48
RAB4B-202ENST00000378307 OR8U1Q8NH10 309 aa12.05□□□□□ -0.48
RAB4B-202ENST00000378307 FBXL15Q9H469 300 aa12.05□□□□□ -0.48
RAB4B-202ENST00000378307 FBXO7Q9Y3I1 522 aa12.05□□□□□ -0.48
RAB4B-202ENST00000378307 WSB1Q9Y6I7 421 aa12.05□□□□□ -0.48
RAB4B-202ENST00000378307 TMEM235A6NFC5 223 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 OR5H14A6NHG9 310 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 SSX5O60225 188 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 PF4P02776 101 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 IGKV1-16P04430 117 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 CD33P20138 364 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 PPIFP30405 207 aaKnown RBP12.04□□□□□ -0.48
RAB4B-202ENST00000378307 KIR2DS1Q14954 304 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 IDNKQ5T6J7 187 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 HACD4Q5VWC8 232 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 TEX38Q6PEX7 206 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 MRPL41Q8IXM3 137 aaKnown RBP12.04□□□□□ -0.48
RAB4B-202ENST00000378307 COMMD1Q8N668 190 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 LINC00482Q8N8I6 264 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 TSPAN14Q8NG11 270 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 OR10J5Q8NHC4 309 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 NUDCD2Q8WVJ2 157 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 SLC25A38Q96DW6 304 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 YIPF6Q96EC8 236 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 DUX3Q96PT4 197 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 OR51J1Q9H342 316 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 GHITMQ9H3K2 345 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 ZFP57Q9NU63 452 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 SDHAF2Q9NX18 166 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 ZNF221Q9UK13 617 aa12.04□□□□□ -0.48
RAB4B-202ENST00000378307 A0A087WXM4 84 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 H7C2Y5 167 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 RRHO14718 337 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 ATP6V0E1O15342 81 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 IGHG4P01861 327 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 MC5RP33032 325 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 TALDO1P37837 337 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 SERPINB10P48595 397 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 THBS3P49746 956 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 KIAA0141Q14154 515 aaPredicted RBP12.03□□□□□ -0.48
RAB4B-202ENST00000378307 SRSF7Q16629 238 aaKnown RBP eCLIP12.03□□□□□ -0.48
RAB4B-202ENST00000378307 LIN54Q6MZP7 749 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 Q6ZS49 121 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 RNF152Q8N8N0 203 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 KLHL30-AS1Q8NEE0 82 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 ST6GALNAC5Q9BVH7 336 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 OR2D2Q9H210 308 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 KLK15Q9H2R5 256 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 RHBDL2Q9NX52 303 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 GAB2Q9UQC2 676 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 WASHC3Q9Y3C0 194 aa12.03□□□□□ -0.48
RAB4B-202ENST00000378307 M0R1X1 148 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 TNFAIP8O95379 198 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 TFAP2AP05549 437 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 GSTP1P09211 210 aaKnown RBP12.02□□□□□ -0.49
RAB4B-202ENST00000378307 EGR2P11161 476 aaPredicted RBP12.02□□□□□ -0.49
RAB4B-202ENST00000378307 VDAC1P21796 283 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 DTYMKP23919 212 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 PSMB8P28062 276 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 LSM3P62310 102 aaKnown RBP12.02□□□□□ -0.49
RAB4B-202ENST00000378307 FOXE3Q13461 319 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 PSG5Q15238 335 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 DEFB136Q30KP8 78 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 FOXB2Q5VYV0 432 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 ZNF695Q8IW36 515 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 H1FOOQ8IZA3 346 aaPredicted RBP12.02□□□□□ -0.49
RAB4B-202ENST00000378307 RAX2Q96IS3 184 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 CLCC1Q96S66 551 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 P2RX4Q99571 388 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 PARP11Q9NR21 331 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 KIAA1456Q9P272 454 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 ZNF580Q9UK33 172 aa12.02□□□□□ -0.49
RAB4B-202ENST00000378307 TRIM64CA6NLI5 447 aa12.01□□□□□ -0.49
RAB4B-202ENST00000378307 NUDT19A8MXV4 375 aa12.01□□□□□ -0.49
RAB4B-202ENST00000378307 J3QRK9 145 aa12.01□□□□□ -0.49
RAB4B-202ENST00000378307 RRP9O43818 475 aaKnown RBP12.01□□□□□ -0.49
RAB4B-202ENST00000378307 DIRAS3O95661 229 aa12.01□□□□□ -0.49
RAB4B-202ENST00000378307 ELANEP08246 267 aa12.01□□□□□ -0.49
RAB4B-202ENST00000378307 PTHLHP12272 177 aa12.01□□□□□ -0.49
RAB4B-202ENST00000378307 RPS19P39019 145 aaKnown RBP12.01□□□□□ -0.49
RAB4B-202ENST00000378307 CX3CL1P78423 397 aa12.01□□□□□ -0.49
RAB4B-202ENST00000378307 C19orf54Q5BKX5 351 aa12.01□□□□□ -0.49
RAB4B-202ENST00000378307 CXorf66Q5JRM2 361 aaPredicted RBP12.01□□□□□ -0.49
RAB4B-202ENST00000378307 GON7Q9BXV9 100 aa12.01□□□□□ -0.49
RAB4B-202ENST00000378307 TPSG1Q9NRR2 321 aa12.01□□□□□ -0.49
RAB4B-202ENST00000378307 DNAH9Q9NYC9 4486 aa12□□□□□ -0.49
RAB4B-202ENST00000378307 TRAV18A0A075B6X5 111 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms