RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 TMEM178AQ8NBL3 297 aa9.16□□□□□ -0.94
BEST1-201ENST00000378043 SDF2L1Q9HCN8 221 aa9.16□□□□□ -0.94
BEST1-201ENST00000378043 KCNIP1Q9NZI2 227 aa9.16□□□□□ -0.94
BEST1-201ENST00000378043 CLN8Q9UBY8 286 aa9.16□□□□□ -0.94
BEST1-201ENST00000378043 METRNQ9UJH8 293 aa9.16□□□□□ -0.94
BEST1-201ENST00000378043 DMXL1Q9Y485 3027 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 MAP1LC3B2A6NCE7 125 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 LRRC30A6NM36 301 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 RNF212BA8MTL3 300 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 B4DEV8 164 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 CYB5BO43169 146 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 HIST1H2BKO60814 126 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 IGKV3-15P01624 115 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 HIST1H2BJP06899 126 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 HIST1H2BOP23527 126 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 HIST1H2BBP33778 126 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 HIST1H2BDP58876 126 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 HIST1H2BCP62807 126 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 HIST2H2BEQ16778 126 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.15□□□□□ -0.94
BEST1-201ENST00000378043 SLC35E4Q6ICL7 350 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 ACSM6Q6P461 480 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 TPRX1Q8N7U7 411 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 WDR31Q8NA23 367 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 ZBTB34Q8NCN2 500 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 HIST1H2BHQ93079 126 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 HIST1H2BNQ99877 126 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 HIST1H2BMQ99879 126 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 SSX3Q99909 188 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 MAP1LC3BQ9GZQ8 125 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 TOLLIPQ9H0E2 274 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 TMPRSS5Q9H3S3 457 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 VAX2Q9UIW0 290 aa9.15□□□□□ -0.94
BEST1-201ENST00000378043 PTBP3O95758 552 aaKnown RBP9.15□□□□□ -0.95
BEST1-201ENST00000378043 TRGC2P03986 189 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 IL2RGP31785 369 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 RND2P52198 227 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 SOX8P57073 446 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 SRSF6Q13247 344 aaKnown RBP9.15□□□□□ -0.95
BEST1-201ENST00000378043 PRAMEF6Q5VXH4 476 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 WDR25Q64LD2 544 aaPredicted RBP9.15□□□□□ -0.95
BEST1-201ENST00000378043 BTNL3Q6UXE8 466 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 WDR82Q6UXN9 313 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 SPNS3Q6ZMD2 512 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 ACP7Q6ZNF0 438 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 MRGPRGQ86SM5 289 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 ZNF610Q8N9Z0 462 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 MRGPRDQ8TDS7 321 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 EDARADDQ8WWZ3 215 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 PINX1Q96BK5 328 aaKnown RBP9.15□□□□□ -0.95
BEST1-201ENST00000378043 LOXL4Q96JB6 756 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 TRIB1Q96RU8 372 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 P2RX4Q99571 388 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 MIOXQ9UGB7 285 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 EP300Q09472 2414 aaPredicted RBP9.15□□□□□ -0.95
BEST1-201ENST00000378043 CADP27708 2225 aa9.15□□□□□ -0.95
BEST1-201ENST00000378043 OOEPA6NGQ2 149 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 CEBPZOSA8MTT3 80 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 M0R296 226 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 IGHG3P01860 377 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 SSTR5P35346 364 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 KIR2DL2P43627 348 aaPredicted RBP9.14□□□□□ -0.95
BEST1-201ENST00000378043 CDX1P47902 265 aaPredicted RBP9.14□□□□□ -0.95
BEST1-201ENST00000378043 NDUFA6P56556 154 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 CD81P60033 236 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 PNRC1Q12796 327 aaPredicted RBP9.14□□□□□ -0.95
BEST1-201ENST00000378043 VWA1Q6PCB0 445 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 ZDHHC16Q969W1 377 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 OR51M1Q9H341 326 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 UFSP2Q9NUQ7 469 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 TMEM242Q9NWH2 141 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 FZR1Q9UM11 496 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 LINC00473A8K010 186 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 HMGB3O15347 200 aaKnown RBP9.14□□□□□ -0.95
BEST1-201ENST00000378043 ZG16O60844 167 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 GABRA2P47869 451 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 TLE1Q04724 770 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 PMS2P11Q13670 270 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 FAM180AQ6UWF9 173 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 CNEP1R1Q8N9A8 125 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 ABHD5Q8WTS1 349 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 MSL2Q9HCI7 577 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 TIMM9Q9Y5J7 89 aa9.14□□□□□ -0.95
BEST1-201ENST00000378043 PHOX2AO14813 284 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 ZNF737O75373 536 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 CYB5R3P00387 301 aaPredicted RBP9.13□□□□□ -0.95
BEST1-201ENST00000378043 COX5AP20674 150 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 RPS16P62249 146 aaKnown RBP9.13□□□□□ -0.95
BEST1-201ENST00000378043 FIP1L1Q6UN15 594 aaKnown RBP9.13□□□□□ -0.95
BEST1-201ENST00000378043 OR13A1Q8NGR1 328 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 PRR7Q8TB68 274 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 LHX4Q969G2 390 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 AGMATQ9BSE5 352 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 GGACTQ9BVM4 153 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.13□□□□□ -0.95
BEST1-201ENST00000378043 CACNA1HO95180 2353 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 RP1L1Q8IWN7 2480 aaPredicted RBP9.13□□□□□ -0.95
BEST1-201ENST00000378043 IGHV3-43A0A0B4J1X8 118 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 OR5H1A6NKK0 313 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 NKX2-8O15522 239 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms