RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 SDF2L1Q9HCN8 221 aa9.83□□□□□ -0.84
TNFRSF9-201ENST00000377507 MAP1LC3B2A6NCE7 125 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 PRR33A8MZF0 331 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 C15orf65H3BRN8 121 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 AGFG2O95081 481 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 IGKV1D-33P01593 117 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 IGKV1-33P01594 117 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 CECR9P0C854 216 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 MDKP21741 143 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 HTD2P86397 168 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 AARDQ4LEZ3 155 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 PIP4P1Q86T03 277 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 FAM169BQ8N8A8 192 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 CNEP1R1Q8N9A8 125 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 OR13D1Q8NGV5 346 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 NANPQ8TBE9 248 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 MRGPRDQ8TDS7 321 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 NINJ1Q92982 152 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 MAP1LC3BQ9GZQ8 125 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 LAMP3Q9UQV4 416 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 CELSR3Q9NYQ7 3312 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 UBE2L5PA0A1B0GUS4 154 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 ATXN7O15265 892 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 CLN5O75503 358 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 S1PR2O95136 353 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 HOXC12P31275 282 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 GABRA2P47869 451 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 CCL11P51671 97 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 FGF8P55075 233 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 COL10A1Q03692 680 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 SMIM21Q3B7S5 101 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 ZNF718Q3SXZ3 478 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 PRAMEF6Q5VXH4 476 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 WDR25Q64LD2 544 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 SLC16A13Q7RTY0 426 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 FAM216AQ8WUB2 273 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 SARAFQ96BY9 339 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 HSD17B10Q99714 261 aaKnown RBP9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 TMEM147Q9BVK8 224 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 TMPRSS5Q9H3S3 457 aa9.82□□□□□ -0.84
TNFRSF9-201ENST00000377507 FAM186AA6NE01 2351 aa9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 TRAV17A0A0B4J275 112 aa9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 TIMM8AO60220 97 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 CYB5R3P00387 301 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 CGAP01215 116 aa9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 IFNA1P01562 189 aa9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 ADH4P08319 380 aa9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 GNB2P62879 340 aa9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 HOXA4Q00056 320 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 ZNF816Q0VGE8 651 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 FOXF2Q12947 444 aa9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 KIAA0141Q14154 515 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 CR1LQ2VPA4 569 aa9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 ACSM6Q6P461 480 aa9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 TRAT1Q6PIZ9 186 aa9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 ZNF808Q8N4W9 903 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 OR13A1Q8NGR1 328 aa9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 CIB3Q96Q77 187 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 TAAR6Q96RI8 345 aa9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 SLC39A9Q9NUM3 307 aa9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 METRNQ9UJH8 293 aa9.81□□□□□ -0.84
TNFRSF9-201ENST00000377507 PCNX2A6NKB5 2137 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 TGIF2-C20orf24A0A0A6YYL0 155 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 IGHV2OR16-5A0A0B4J2B6 119 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 LINC00473A8K010 186 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 AHRRA9YTQ3 701 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 ZNF737O75373 536 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 TNFSF13O75888 250 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 MBP02144 154 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 CD55P08174 381 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 SSTR5P35346 364 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 CDX1P47902 265 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 CD81P60033 236 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 MZT1Q08AG7 82 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 OR8G2PQ6IF36 304 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 ZNF610Q8N9Z0 462 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 DTD1Q8TEA8 209 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 LHX4Q969G2 390 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 CTDSP1Q9GZU7 261 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 MSL2Q9HCI7 577 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 ASCL3Q9NQ33 180 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 ZNF71Q9NQZ8 489 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 CLN8Q9UBY8 286 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 IGHV1-18A0A0C4DH31 117 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 CTXND1A0A1B0GTU2 59 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 OR5H1A6NKK0 313 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 CLDN34H7C241 214 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 ZG16O60844 167 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 TFF1P04155 84 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 GCH1P30793 250 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 CFHR2P36980 270 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 FABP6P51161 128 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 ELLP55199 621 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 SRSF6Q13247 344 aaKnown RBP9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 P2RY6Q15077 328 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 OR2B11Q5JQS5 317 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 H2BFWTQ7Z2G1 175 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 CD177Q8N6Q3 437 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 OR10P1Q8NGE3 313 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 GSN-AS1Q9NRJ2 163 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms