RNA–Protein interactions for RNA: ENST00000377294.2

ZKSCAN4-201, Transcript of zinc finger with KRAB and SCAN domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN4, Length 2,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4-201ENST00000377294 RAB11AP62491 216 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 Q3ZCU0 254 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 ACSF3Q4G176 576 aaPredicted RBP12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 PIP4P1Q86T03 277 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 RCC1LQ96I51 464 aaKnown RBP12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 DUSP13Q9UII6 198 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 PSG11Q9UQ72 335 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 C5orf52A6NGY3 159 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 LINC00587B1AMM8 73 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 ZG16O60844 167 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 TNFSF13O75888 250 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 RAB2AP61019 212 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 SLC38A11Q08AI6 406 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 FABP9Q0Z7S8 132 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 ZNF787Q6DD87 383 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 VHLLQ6RSH7 139 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 SEM1Q6ZVN7 128 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 LINC00469Q8N7U9 141 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 OR2Z1Q8NG97 314 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 LRRC29Q8WV35 223 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 YPEL4Q96NS1 127 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 CXXC4Q9H2H0 198 aa12.13□□□□□ -0.47
ZKSCAN4-201ENST00000377294 LOC102723971A0A1B0GUV8 181 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 TMEM210A6NLX4 147 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 J3QW42 95 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 S100A6P06703 90 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 TNFRSF9Q07011 255 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 EIF4EBP1Q13541 118 aaPredicted RBP12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 FAM201AQ5SY85 155 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 LURAP1LQ8IV03 231 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 MUCL1Q96DR8 90 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 TMPRSS5Q9H3S3 457 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 CEP250Q9BV73 2442 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 TGIF2-C20orf24A0A0A6YYL0 155 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 C1QTNF9BB2RNN3 333 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 ZNF83P51522 516 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 ERVFRD-1P60508 538 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 LRRC75BQ2VPJ9 315 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 Q8WTZ3 238 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 STARD4Q96DR4 205 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 WDR61Q9GZS3 305 aaKnown RBP12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 PTPRBP23467 1997 aa12.12□□□□□ -0.47
ZKSCAN4-201ENST00000377294 OOEPA6NGQ2 149 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 AQP7O14520 342 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 SELLP14151 372 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 RPS10P46783 165 aaKnown RBP12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 TFF3Q07654 80 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 NCMAPQ5T1S8 102 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 FIP1L1Q6UN15 594 aaKnown RBP12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 GATAD1Q8WUU5 269 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 TUBA4BQ9H853 241 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 PRR33A8MZF0 331 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 RBMXL2O75526 392 aaKnown RBP12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 WNT2P09544 360 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 RNF212Q495C1 297 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 FAM90A2PQ658T7 463 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 SLC35E4Q6ICL7 350 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 ACSM6Q6P461 480 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 SSX9Q7RTT3 188 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 VKORC1L1Q8N0U8 176 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 ZNF561Q8N587 486 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 NANPQ8TBE9 248 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 NINJ1Q92982 152 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 LEAP2Q969E1 77 aa12.11□□□□□ -0.47
ZKSCAN4-201ENST00000377294 TRAV17A0A0B4J275 112 aa12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 BTBD17A6NE02 478 aa12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 HSPB1P04792 205 aaKnown RBP12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 OR8U8P0C7N1 319 aa12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 GCH1P30793 250 aa12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 FAM209BQ5JX69 171 aa12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 TAF15Q92804 592 aaKnown RBP eCLIP12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 SSX3Q99909 188 aa12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 SLC25A22Q9H936 323 aa12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 MAP1BP46821 2468 aaKnown RBP12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 ZFHX2Q9C0A1 2572 aaPredicted RBP12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 LRRC30A6NM36 301 aa12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 PPIHO43447 177 aaKnown RBP12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 P0C879 139 aa12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 COL8A2P25067 703 aa12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 HBG1P69891 147 aa12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 HBG2P69892 147 aa12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 DUX4L9Q6RFH8 374 aaPredicted RBP12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 HEPN1Q6WQI6 88 aa12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 RPP25LQ8N5L8 163 aaKnown RBP12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 KDF1Q8NAX2 398 aaPredicted RBP12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 ZNRF1Q8ND25 227 aa12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 NIPSNAP3BQ9BS92 247 aa12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 ZNF71Q9NQZ8 489 aaPredicted RBP12.1□□□□□ -0.47
ZKSCAN4-201ENST00000377294 IGKV1D-17A0A075B6S4 117 aa12.09□□□□□ -0.47
ZKSCAN4-201ENST00000377294 CEBPZOSA8MTT3 80 aa12.09□□□□□ -0.47
ZKSCAN4-201ENST00000377294 K7EM74 188 aa12.09□□□□□ -0.47
ZKSCAN4-201ENST00000377294 PROP1O75360 226 aa12.09□□□□□ -0.47
ZKSCAN4-201ENST00000377294 BCL2P10415 239 aa12.09□□□□□ -0.47
ZKSCAN4-201ENST00000377294 BMP5P22003 454 aa12.09□□□□□ -0.47
ZKSCAN4-201ENST00000377294 CD200P41217 278 aa12.09□□□□□ -0.47
ZKSCAN4-201ENST00000377294 ELOBQ15370 118 aa12.09□□□□□ -0.47
ZKSCAN4-201ENST00000377294 ZNF718Q3SXZ3 478 aa12.09□□□□□ -0.47
ZKSCAN4-201ENST00000377294 NCR3LG1Q68D85 454 aa12.09□□□□□ -0.47
ZKSCAN4-201ENST00000377294 IGFL2Q6UWQ7 119 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms