RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 FOXF2Q12947 444 aa13.65□□□□□ -0.22
TRIM27-202ENST00000377199 ZNF146Q15072 292 aa13.65□□□□□ -0.22
TRIM27-202ENST00000377199 Q3ZCU0 254 aa13.65□□□□□ -0.22
TRIM27-202ENST00000377199 KDF1Q8NAX2 398 aaPredicted RBP13.65□□□□□ -0.22
TRIM27-202ENST00000377199 RPUSD4Q96CM3 377 aaKnown RBP13.65□□□□□ -0.22
TRIM27-202ENST00000377199 WDR61Q9GZS3 305 aaKnown RBP13.65□□□□□ -0.22
TRIM27-202ENST00000377199 SLC39A9Q9NUM3 307 aa13.65□□□□□ -0.22
TRIM27-202ENST00000377199 MIOXQ9UGB7 285 aa13.65□□□□□ -0.22
TRIM27-202ENST00000377199 DUSP13Q9UII6 198 aa13.65□□□□□ -0.22
TRIM27-202ENST00000377199 PSG11Q9UQ72 335 aa13.65□□□□□ -0.22
TRIM27-202ENST00000377199 SPTBN2O15020 2390 aa13.64□□□□□ -0.23
TRIM27-202ENST00000377199 ODAMA1E959 279 aa13.64□□□□□ -0.23
TRIM27-202ENST00000377199 TNFSF10P50591 281 aa13.64□□□□□ -0.23
TRIM27-202ENST00000377199 FIP1L1Q6UN15 594 aaKnown RBP13.64□□□□□ -0.23
TRIM27-202ENST00000377199 FAM214BQ7L5A3 538 aa13.64□□□□□ -0.23
TRIM27-202ENST00000377199 GATAD1Q8WUU5 269 aa13.64□□□□□ -0.23
TRIM27-202ENST00000377199 SMDT1Q9H4I9 107 aa13.64□□□□□ -0.23
TRIM27-202ENST00000377199 INTS1Q8N201 2190 aaKnown RBP13.64□□□□□ -0.23
TRIM27-202ENST00000377199 TRBV23-1A0A0A0MS06 115 aa13.64□□□□□ -0.23
TRIM27-202ENST00000377199 TUBG1P23258 451 aa13.64□□□□□ -0.23
TRIM27-202ENST00000377199 GABRA6Q16445 453 aa13.64□□□□□ -0.23
TRIM27-202ENST00000377199 LRRC75BQ2VPJ9 315 aa13.64□□□□□ -0.23
TRIM27-202ENST00000377199 GFI1BQ5VTD9 330 aa13.64□□□□□ -0.23
TRIM27-202ENST00000377199 FAM90A2PQ658T7 463 aa13.64□□□□□ -0.23
TRIM27-202ENST00000377199 OR8G5Q8NG78 346 aa13.64□□□□□ -0.23
TRIM27-202ENST00000377199 TAF15Q92804 592 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRIM27-202ENST00000377199 MBNL3Q9NUK0 354 aaKnown RBP13.64□□□□□ -0.23
TRIM27-202ENST00000377199 DOK5Q9P104 306 aa13.64□□□□□ -0.23
TRIM27-202ENST00000377199 SMIM6P0DI80 62 aa13.63□□□□□ -0.23
TRIM27-202ENST00000377199 ADIRFQ15847 76 aa13.63□□□□□ -0.23
TRIM27-202ENST00000377199 SPNS3Q6ZMD2 512 aa13.63□□□□□ -0.23
TRIM27-202ENST00000377199 GSN-AS1Q9NRJ2 163 aa13.63□□□□□ -0.23
TRIM27-202ENST00000377199 ROS1P08922 2347 aa13.63□□□□□ -0.23
TRIM27-202ENST00000377199 EIF2S3P41091 472 aaKnown RBP13.63□□□□□ -0.23
TRIM27-202ENST00000377199 COL10A1Q03692 680 aa13.63□□□□□ -0.23
TRIM27-202ENST00000377199 RPP25LQ8N5L8 163 aaKnown RBP13.63□□□□□ -0.23
TRIM27-202ENST00000377199 ZNF645Q8N7E2 425 aa13.63□□□□□ -0.23
TRIM27-202ENST00000377199 OR13A1Q8NGR1 328 aa13.63□□□□□ -0.23
TRIM27-202ENST00000377199 COQ2Q96H96 371 aa13.63□□□□□ -0.23
TRIM27-202ENST00000377199 ZNF737O75373 536 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 TFF3Q07654 80 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 VHLLQ6RSH7 139 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 C9orf106Q8NAJ2 232 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 YPEL4Q96NS1 127 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 ZDHHC11Q9H8X9 412 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 TRAV20A0A0B4J274 112 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 SLC25A6P12236 298 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 ZNF610Q8N9Z0 462 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 IQCF6A8MYZ5 107 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 NPIPB11E5RHQ5 1161 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 FGF7P21781 194 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 TRIP6Q15654 476 aaKnown RBP13.62□□□□□ -0.23
TRIM27-202ENST00000377199 ACSM6Q6P461 480 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 VKORC1L1Q8N0U8 176 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 ZNF251Q9BRH9 671 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 TREM2Q9NZC2 230 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 WIPI2Q9Y4P8 454 aa13.62□□□□□ -0.23
TRIM27-202ENST00000377199 DMXL2Q8TDJ6 3036 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 LINC00473A8K010 186 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 RNF212BA8MTL3 300 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 TMEM41BQ5BJD5 291 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 WDR25Q64LD2 544 aaPredicted RBP13.61□□□□□ -0.23
TRIM27-202ENST00000377199 H2BFWTQ7Z2G1 175 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 OPN3Q9H1Y3 402 aaPredicted RBP13.61□□□□□ -0.23
TRIM27-202ENST00000377199 RYDENQ9NUL5 291 aaKnown RBP13.61□□□□□ -0.23
TRIM27-202ENST00000377199 IGHV3OR15-7A0A075B7D8 119 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.61□□□□□ -0.23
TRIM27-202ENST00000377199 SPAARA0A1B0GVQ0 90 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 SMCO3A2RU48 225 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 CECR9P0C854 216 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 B2MP61769 119 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 PLA2G2CQ5R387 149 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 CDPF1Q6NVV7 123 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 WDR82Q6UXN9 313 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 Q6ZT83 130 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 SLC35E3Q7Z769 313 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 C11orf53Q8IXP5 236 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 OR2Z1Q8NG97 314 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 DTD1Q8TEA8 209 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 SMIM7Q9BQ49 75 aa13.61□□□□□ -0.23
TRIM27-202ENST00000377199 DPPA3Q6W0C5 159 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 CA5BP1Q8WTZ4 195 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 OOEPA6NGQ2 149 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 LRRC30A6NM36 301 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 HIST1H2BKO60814 126 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 HIST1H2BJP06899 126 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 HIST1H2BOP23527 126 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 GCH1P30793 250 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 HIST1H2BBP33778 126 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 HIST1H2BDP58876 126 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 BRWD1-AS2P59051 145 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 HIST1H2BCP62807 126 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 CATR1Q13166 79 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 HIST2H2BEQ16778 126 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.6□□□□□ -0.23
TRIM27-202ENST00000377199 SP5Q6BEB4 398 aaPredicted RBP13.6□□□□□ -0.23
TRIM27-202ENST00000377199 ACP7Q6ZNF0 438 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 HIST1H2BHQ93079 126 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 MALSU1Q96EH3 234 aa13.6□□□□□ -0.23
TRIM27-202ENST00000377199 FAM210BQ96KR6 192 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms