RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 SNURFLB1AK76 121 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 PROB1E7EW31 1015 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 K7ESF4 209 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 COX7A1P24310 79 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 DDTP30046 118 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 OR10J1P30954 320 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 AMTP48728 403 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 ZNF137PP52743 207 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 DEFB124Q8NES8 71 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 OR4S2Q8NH73 311 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 TM2D1Q9BX74 207 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 CYTL1Q9NRR1 136 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 PXMP4Q9Y6I8 212 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 NCBP2LA6PVI3 153 aaKnown RBP5.6□□□□□ -1.51
SMC1A-202ENST00000375340 F8VVB4 439 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 F8VWA3 439 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 EGR1P18146 543 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 LRRC10Q5BKY1 277 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 GATAD1Q8WUU5 269 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 ATG101Q9BSB4 218 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 CBLN4Q9NTU7 201 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 CD1BP29016 333 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 CDX1P47902 265 aaPredicted RBP5.6□□□□□ -1.51
SMC1A-202ENST00000375340 DLL3Q9NYJ7 618 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 CSN1S1P47710 185 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 ICAM4Q14773 271 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 HELTA6NFD8 242 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 B2MP61769 119 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 TNXAQ16473 311 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 CALHM1Q8IU99 346 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 OR5AU1Q8NGC0 362 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 CLDND2Q8NHS1 167 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 DMRTA2Q96SC8 542 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 SPTBN1Q01082 2364 aaKnown RBP5.6□□□□□ -1.51
SMC1A-202ENST00000375340 LOC390937A0A1W2PQ73 354 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 WNT9BO14905 357 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 TCF21O43680 179 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 RNF224P0DH78 156 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 CT45A10P0DMU9 189 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 SPATA45Q537H7 98 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 Q56UQ5 140 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 TAF15Q92804 592 aaKnown RBP eCLIP5.6□□□□□ -1.51
SMC1A-202ENST00000375340 DDA1Q9BW61 102 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 MYOZ1Q9NP98 299 aaPredicted RBP5.6□□□□□ -1.51
SMC1A-202ENST00000375340 ADCYAP1P18509 176 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 C10orf128Q5T292 105 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 HSPB9Q9BQS6 159 aa5.6□□□□□ -1.51
SMC1A-202ENST00000375340 A0A1W2PR77 199 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 CCL20P78556 96 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 MRPS11P82912 194 aaKnown RBP5.59□□□□□ -1.51
SMC1A-202ENST00000375340 OR5P3Q8WZ94 311 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 SRD5A3Q9H8P0 318 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 MEF2BQ02080 365 aaPredicted RBP5.59□□□□□ -1.51
SMC1A-202ENST00000375340 WDR73Q6P4I2 378 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 OR8I2Q8N0Y5 310 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 DIDO1Q9BTC0 2240 aaKnown RBP5.59□□□□□ -1.51
SMC1A-202ENST00000375340 NDUFB3O43676 98 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 TNFRSF9Q07011 255 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 GAMTQ14353 236 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 FBXW9Q5XUX1 488 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 CDX2Q99626 313 aaPredicted RBP5.59□□□□□ -1.51
SMC1A-202ENST00000375340 TECRQ9NZ01 308 aaKnown RBP5.59□□□□□ -1.51
SMC1A-202ENST00000375340 DMRT1Q9Y5R6 373 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 DIRC3C9JPN6 131 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 HSBP1O75506 76 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 C10orf113Q5VZT2 155 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 SGMS2Q8NHU3 365 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 FOXJ2Q9P0K8 574 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 HS3ST3B1Q9Y662 390 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 NOTCH4Q99466 2003 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 FCER1GP30273 86 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 RBPJQ06330 500 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 DCAF10Q5QP82 559 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 FGFRL1Q8N441 504 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 OR2D3Q8NGH3 330 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 VSIRQ9H7M9 311 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 NGBQ9NPG2 151 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 CBY1Q9Y3M2 126 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 PLAUP00749 431 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 CELA3BP08861 270 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 ZNF506Q5JVG8 444 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 PDPNQ86YL7 162 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 APC2O95996 2303 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 ZDBF2Q9HCK1 2354 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 EP400Q96L91 3159 aa5.59□□□□□ -1.51
SMC1A-202ENST00000375340 GFI1BQ5VTD9 330 aa5.59□□□□□ -1.52
SMC1A-202ENST00000375340 ATOH7Q8N100 152 aa5.59□□□□□ -1.52
SMC1A-202ENST00000375340 SAP25Q8TEE9 199 aa5.59□□□□□ -1.52
SMC1A-202ENST00000375340 IGKV1D-13A0A0B4J2D9 117 aa5.59□□□□□ -1.52
SMC1A-202ENST00000375340 ZIC3O60481 467 aa5.59□□□□□ -1.52
SMC1A-202ENST00000375340 SRP19P09132 144 aaKnown RBP5.59□□□□□ -1.52
SMC1A-202ENST00000375340 IGKV1-13P0DP09 117 aa5.59□□□□□ -1.52
SMC1A-202ENST00000375340 SSTR5P35346 364 aa5.59□□□□□ -1.52
SMC1A-202ENST00000375340 RPL39P5Q59GN2 51 aa5.59□□□□□ -1.52
SMC1A-202ENST00000375340 FA2HQ7L5A8 372 aa5.59□□□□□ -1.52
SMC1A-202ENST00000375340 WIPI2Q9Y4P8 454 aa5.59□□□□□ -1.52
SMC1A-202ENST00000375340 hCG_38984A0A1B0GV85 526 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 TMEM210A6NLX4 147 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 OR2J3O76001 311 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 VMA21Q3ZAQ7 101 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms