RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 TMEM186Q96B77 213 aa14.02□□□□□ -0.17
HLA-DMA-201ENST00000374843 HSD17B10Q99714 261 aaKnown RBP14.02□□□□□ -0.17
HLA-DMA-201ENST00000374843 LIN7CQ9NUP9 197 aaKnown RBP14.02□□□□□ -0.17
HLA-DMA-201ENST00000374843 ZNRD1Q9P1U0 126 aa14.02□□□□□ -0.17
HLA-DMA-201ENST00000374843 SHPKQ9UHJ6 478 aa14.02□□□□□ -0.17
HLA-DMA-201ENST00000374843 AMMECR1Q9Y4X0 333 aaPredicted RBP14.02□□□□□ -0.17
HLA-DMA-201ENST00000374843 hCG_2014768A0A024R1R8 64 aa14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 TEX13DA0A0J9YY54 714 aaPredicted RBP14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 TOR1AO14656 332 aa14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 IFNA2P01563 188 aa14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 TRAPPC2P0DI81 140 aa14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 TRAPPC2BP0DI82 140 aa14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 IGHV4-31P0DP07 118 aa14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 COX7A1P24310 79 aa14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 F2RP25116 425 aa14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 IL3RAP26951 378 aa14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 GZMKP49863 264 aa14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 BCAP31P51572 246 aa14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 PRRX1P54821 245 aa14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 PNKDQ8N490 385 aa14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 OR4P4Q8NGL7 312 aa14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 OR10X1Q8NGY0 326 aa14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 FAM212BQ9NTI7 297 aaPredicted RBP14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 CR1P17927 2039 aa14.01□□□□□ -0.17
HLA-DMA-201ENST00000374843 YLPM1P49750 1951 aaKnown RBP14□□□□□ -0.17
HLA-DMA-201ENST00000374843 MAP1AP78559 2803 aaPredicted RBP14□□□□□ -0.17
HLA-DMA-201ENST00000374843 C3orf85A0A1B0GTC6 90 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 RNASEK-C17orf49H0YIS7 233 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 J3QLI3 93 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 TNFSF12O43508 249 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 OR5AC1P0C628 307 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 ANXA3P12429 323 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 UCP1P25874 307 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 DUTP33316 252 aaKnown RBP14□□□□□ -0.17
HLA-DMA-201ENST00000374843 CATR1Q13166 79 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 CBX3Q13185 183 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 TMEM187Q14656 261 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 RPL39P5Q59GN2 51 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 DCAF12L2Q5VW00 463 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 C1orf229Q6ZS94 237 aaPredicted RBP14□□□□□ -0.17
HLA-DMA-201ENST00000374843 TCTEX1D1Q8N7M0 179 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 LRTM2Q8N967 370 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 MSI2Q96DH6 328 aaKnown RBP14□□□□□ -0.17
HLA-DMA-201ENST00000374843 TP53RKQ96S44 253 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 S1PR3Q99500 378 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 KCNIP3Q9Y2W7 256 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 ARHGAP32A7KAX9 2087 aa14□□□□□ -0.17
HLA-DMA-201ENST00000374843 ITPR3Q14573 2671 aa13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 LY6LH3BQJ8 138 aa13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 M0R1X1 148 aa13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 RRAS2P62070 204 aaPredicted RBP13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 RPL30P62888 115 aaKnown RBP13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 SRPXP78539 464 aa13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 KLRD1Q13241 179 aa13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 SLC9A3R2Q15599 337 aa13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 ANKRD55Q3KP44 614 aa13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 DDB2Q92466 427 aa13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 ADTRPQ96IZ2 230 aa13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 GPHA2Q96T91 129 aa13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 PHB2Q99623 299 aa13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 PCGF1Q9BSM1 259 aa13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 TMEM222Q9H0R3 208 aa13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 HIF1ANQ9NWT6 349 aa13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 CCDC168Q8NDH2 2452 aa13.99□□□□□ -0.17
HLA-DMA-201ENST00000374843 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.98□□□□□ -0.17
HLA-DMA-201ENST00000374843 DBX1A6NMT0 343 aa13.98□□□□□ -0.17
HLA-DMA-201ENST00000374843 BUB1B-PAK6H3BSN5 160 aa13.98□□□□□ -0.17
HLA-DMA-201ENST00000374843 THBS3P49746 956 aa13.98□□□□□ -0.17
HLA-DMA-201ENST00000374843 UBE2E1P51965 193 aa13.98□□□□□ -0.17
HLA-DMA-201ENST00000374843 PRB3Q04118 309 aaPredicted RBP13.98□□□□□ -0.17
HLA-DMA-201ENST00000374843 LIAT1Q6ZQX7 453 aa13.98□□□□□ -0.17
HLA-DMA-201ENST00000374843 C12orf45Q8N5I9 185 aaPredicted RBP13.98□□□□□ -0.17
HLA-DMA-201ENST00000374843 MAPK1IP1LQ8NDC0 245 aa13.98□□□□□ -0.17
HLA-DMA-201ENST00000374843 OR51H1Q8NH63 302 aa13.98□□□□□ -0.17
HLA-DMA-201ENST00000374843 COQ8AQ8NI60 647 aa13.98□□□□□ -0.17
HLA-DMA-201ENST00000374843 GLYATL2Q8WU03 294 aa13.98□□□□□ -0.17
HLA-DMA-201ENST00000374843 IL22RA2Q969J5 263 aa13.98□□□□□ -0.17
HLA-DMA-201ENST00000374843 TMEM56Q96MV1 263 aa13.98□□□□□ -0.17
HLA-DMA-201ENST00000374843 TMEM56-RWDD3S4R434 201 aa13.98□□□□□ -0.17
HLA-DMA-201ENST00000374843 HMX3A6NHT5 357 aa13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 LINC00473A8K010 186 aa13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 RBFOX2O43251 390 aaKnown RBP eCLIP13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 TXNL1O43396 289 aa13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 SSNA1O43805 119 aa13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 ARG1P05089 322 aa13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 SULT1A3P0DMM9 295 aa13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 SULT1A4P0DMN0 295 aa13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 KIR2DS2P43631 304 aa13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 ZNF816Q0VGE8 651 aaPredicted RBP13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 MINOS1Q5TGZ0 78 aa13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 CASTOR1Q8WTX7 329 aa13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 TCTEX1D2Q8WW35 142 aa13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 MED28Q9H204 178 aa13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 TBL2Q9Y4P3 447 aaKnown RBP13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 AUP1Q9Y679 476 aa13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 MINOS1-NBL1R4GNA1 71 aa13.97□□□□□ -0.17
HLA-DMA-201ENST00000374843 MED13LQ71F56 2210 aa13.96□□□□□ -0.17
HLA-DMA-201ENST00000374843 PIGBOS1A0A0B4J2F0 54 aa13.96□□□□□ -0.17
HLA-DMA-201ENST00000374843 CDS2O95674 445 aa13.96□□□□□ -0.17
HLA-DMA-201ENST00000374843 HLA-GP17693 338 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms