RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 ZNF705EA8MWA4 302 aaPredicted RBP3.99□□□□□ -1.77
USP48-202ENST00000374730 H0Y980 276 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 TRIM77I1YAP6 450 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 DNASE2O00115 360 aaPredicted RBP3.99□□□□□ -1.77
USP48-202ENST00000374730 GPR31O00270 319 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 ABCD4O14678 606 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 DEGS1O15121 323 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 ST8SIA3O43173 380 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 PHF1O43189 567 aaPredicted RBP3.99□□□□□ -1.77
USP48-202ENST00000374730 SYNGR1O43759 233 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 NGFP01138 241 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 SEC11BP0C7V7 166 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 CCL2P13500 99 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 MMP9P14780 707 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 PRKACAP17612 351 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 ADCYAP1P18509 176 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 RCC1P18754 421 aaPredicted RBP3.99□□□□□ -1.77
USP48-202ENST00000374730 UCP1P25874 307 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 GNRHRP30968 328 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 MDH2P40926 338 aaKnown RBP3.99□□□□□ -1.77
USP48-202ENST00000374730 COMPP49747 757 aaPredicted RBP3.99□□□□□ -1.77
USP48-202ENST00000374730 PDLIM4P50479 330 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 TNFSF10P50591 281 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 CAV2P51636 162 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 F2RL1P55085 397 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 TMEM33P57088 247 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 ARG2P78540 354 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 HLA-DRB3P79483 266 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 HERPUD1Q15011 391 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 GUSBP1Q15486 140 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 TGIF1Q15583 401 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 GABRA6Q16445 453 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 C3AR1Q16581 482 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 TBC1D28Q2M2D7 210 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 SP6Q3SY56 376 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 HIKESHIQ53FT3 197 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 IGSF11Q5DX21 431 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 OR2A2Q6IF42 318 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 HAGHLQ6PII5 290 aaPredicted RBP3.99□□□□□ -1.77
USP48-202ENST00000374730 SPSB3Q6PJ21 355 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 ATRAIDQ6UW56 229 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 IGFL2Q6UWQ7 119 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 BTNL8Q6UX41 500 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 FBXW12Q6X9E4 464 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 LYZL2Q7Z4W2 148 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 MDP1Q86V88 176 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 FAM219AQ8IW50 185 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 FOXRED2Q8IWF2 684 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 Q8IYB0 196 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 FAM58AQ8N1B3 248 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 GAPTQ8N292 157 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 SVBPQ8N300 66 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 COMMD1Q8N668 190 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 SLC35G3Q8N808 338 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 ZNF565Q8N9K5 539 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.99□□□□□ -1.77
USP48-202ENST00000374730 DMBX1Q8NFW5 382 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 OR5T2Q8NGG2 359 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 OR11L1Q8NGX0 322 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 LILRB1Q8NHL6 650 aaPredicted RBP3.99□□□□□ -1.77
USP48-202ENST00000374730 LYPD6BQ8NI32 183 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 TMEM68Q96MH6 324 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 TP53RKQ96S44 253 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 TSNAXQ99598 290 aaKnown RBP3.99□□□□□ -1.77
USP48-202ENST00000374730 MICU1Q9BPX6 476 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 NRIP2Q9BQI9 281 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 GINS3Q9BRX5 216 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 RTL8AQ9BWD3 113 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 SEC11CQ9BY50 192 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 NKX6-2Q9C056 277 aaPredicted RBP3.99□□□□□ -1.77
USP48-202ENST00000374730 OR51I2Q9H344 312 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 FAM212BQ9NTI7 297 aaPredicted RBP3.99□□□□□ -1.77
USP48-202ENST00000374730 TREM2Q9NZC2 230 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 COQ3Q9NZJ6 369 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 CLCF1Q9UBD9 225 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 ZNF629Q9UEG4 869 aaPredicted RBP3.99□□□□□ -1.77
USP48-202ENST00000374730 RCL1Q9Y2P8 373 aaKnown RBP3.99□□□□□ -1.77
USP48-202ENST00000374730 R4GN57 208 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 CACNA1HO95180 2353 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 OTOGLQ3ZCN5 2332 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 CFAP47Q6ZTR5 3102 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 TRAV24A0A0B4J272 114 aa3.98□□□□□ -1.77
USP48-202ENST00000374730 IGKV1-6A0A0C4DH72 117 aa3.98□□□□□ -1.77
USP48-202ENST00000374730 LRP5LA4QPB2 252 aa3.98□□□□□ -1.77
USP48-202ENST00000374730 TMEM210A6NLX4 147 aa3.98□□□□□ -1.77
USP48-202ENST00000374730 IQCF6A8MYZ5 107 aa3.98□□□□□ -1.77
USP48-202ENST00000374730 F8W036 122 aa3.98□□□□□ -1.77
USP48-202ENST00000374730 SMPD2O60906 423 aa3.98□□□□□ -1.77
USP48-202ENST00000374730 PITX3O75364 302 aa3.98□□□□□ -1.77
USP48-202ENST00000374730 MED6O75586 246 aa3.98□□□□□ -1.77
USP48-202ENST00000374730 SNAPINO95295 136 aa3.98□□□□□ -1.77
USP48-202ENST00000374730 CD5P06127 495 aa3.98□□□□□ -1.77
USP48-202ENST00000374730 SCTP09683 121 aa3.98□□□□□ -1.77
USP48-202ENST00000374730 SPP1P10451 314 aa3.98□□□□□ -1.77
USP48-202ENST00000374730 SLC25A6P12236 298 aa3.98□□□□□ -1.77
USP48-202ENST00000374730 SELEP16581 610 aa3.98□□□□□ -1.77
USP48-202ENST00000374730 ZNF14P17017 642 aaPredicted RBP3.98□□□□□ -1.77
USP48-202ENST00000374730 PVALBP20472 110 aaPredicted RBP3.98□□□□□ -1.77
USP48-202ENST00000374730 COX5AP20674 150 aa3.98□□□□□ -1.77
USP48-202ENST00000374730 VDAC1P21796 283 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms