RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 IGKV1-13P0DP09 117 aa12.05□□□□□ -0.48
HSPG2-201ENST00000374673 AADACP22760 399 aa12.05□□□□□ -0.48
HSPG2-201ENST00000374673 CD1BP29016 333 aa12.05□□□□□ -0.48
HSPG2-201ENST00000374673 RPL15P61313 204 aaKnown RBP12.05□□□□□ -0.48
HSPG2-201ENST00000374673 LSAMPQ13449 338 aa12.05□□□□□ -0.48
HSPG2-201ENST00000374673 EBI3Q14213 229 aa12.05□□□□□ -0.48
HSPG2-201ENST00000374673 LY6EQ16553 131 aa12.05□□□□□ -0.48
HSPG2-201ENST00000374673 PYDC2Q56P42 97 aa12.05□□□□□ -0.48
HSPG2-201ENST00000374673 ZNF645Q8N7E2 425 aa12.05□□□□□ -0.48
HSPG2-201ENST00000374673 MRPL20Q9BYC9 149 aaKnown RBP12.05□□□□□ -0.48
HSPG2-201ENST00000374673 SRRQ9GZT4 340 aa12.05□□□□□ -0.48
HSPG2-201ENST00000374673 SDHAF2Q9NX18 166 aa12.05□□□□□ -0.48
HSPG2-201ENST00000374673 TAS2R8Q9NYW2 309 aa12.05□□□□□ -0.48
HSPG2-201ENST00000374673 NIPBLQ6KC79 2804 aaeCLIP12.04□□□□□ -0.48
HSPG2-201ENST00000374673 GPR137BO60478 399 aa12.04□□□□□ -0.48
HSPG2-201ENST00000374673 SLC22A5O76082 557 aa12.04□□□□□ -0.48
HSPG2-201ENST00000374673 CD3DP04234 171 aa12.04□□□□□ -0.48
HSPG2-201ENST00000374673 SNRNP70P08621 437 aaKnown RBP12.04□□□□□ -0.48
HSPG2-201ENST00000374673 FAM106CPP0CH98 169 aa12.04□□□□□ -0.48
HSPG2-201ENST00000374673 MSMO1Q15800 293 aa12.04□□□□□ -0.48
HSPG2-201ENST00000374673 RNASE10Q5GAN6 216 aaKnown RBP12.04□□□□□ -0.48
HSPG2-201ENST00000374673 CCBE1Q6UXH8 406 aaPredicted RBP12.04□□□□□ -0.48
HSPG2-201ENST00000374673 Q8N402 240 aa12.04□□□□□ -0.48
HSPG2-201ENST00000374673 OR6F1Q8NGZ6 308 aa12.04□□□□□ -0.48
HSPG2-201ENST00000374673 CAPSLQ8WWF8 208 aa12.04□□□□□ -0.48
HSPG2-201ENST00000374673 C5orf30Q96GV9 206 aa12.04□□□□□ -0.48
HSPG2-201ENST00000374673 ZNF2Q9BSG1 426 aaPredicted RBP12.04□□□□□ -0.48
HSPG2-201ENST00000374673 THAP7Q9BT49 309 aaPredicted RBP12.04□□□□□ -0.48
HSPG2-201ENST00000374673 RAB18Q9NP72 206 aa12.04□□□□□ -0.48
HSPG2-201ENST00000374673 IGHV3-72A0A0B4J1Y9 119 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 ANKRD20A5PA0PJZ0 165 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 J3QRK9 145 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 M0QYG6 137 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 IGKV1D-33P01593 117 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 IGKV1-33P01594 117 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 CT45A6P0DMU7 189 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 CT45A5P0DMU8 189 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 CT45A7P0DMV0 189 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 CD24P25063 80 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 ZNF45Q02386 682 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 FBLN7Q53RD9 439 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 STEAP1BQ6NZ63 245 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 C16orf82Q7Z2V1 217 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 ARRDC1Q8N5I2 433 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 GDPD1Q8N9F7 314 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 TRIM63Q969Q1 353 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 MOB3AQ96BX8 217 aa12.03□□□□□ -0.48
HSPG2-201ENST00000374673 TINAGL1Q9GZM7 467 aaPredicted RBP12.03□□□□□ -0.48
HSPG2-201ENST00000374673 SETD2Q9BYW2 2564 aaPredicted RBP12.02□□□□□ -0.48
HSPG2-201ENST00000374673 FAM181BA6NEQ2 426 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 OR5H14A6NHG9 310 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 M0R1X1 148 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 CHST1O43916 411 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 OR2F2O95006 317 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 RAB3DO95716 219 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 IGLV2-14P01704 120 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 FXYD4P59646 89 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 HERV-K104P61576 105 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 TSPAN5P62079 268 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 KRTAP24-1Q3LI83 254 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 TMEM219Q86XT9 240 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 OR5AN1Q8NGI8 311 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 OR2T10Q8NGZ9 312 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 RBM14Q96PK6 669 aaKnown RBP12.02□□□□□ -0.49
HSPG2-201ENST00000374673 FXYD6Q9H0Q3 95 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 AKIP1Q9NQ31 210 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 C2CD3Q4AC94 2353 aa12.02□□□□□ -0.49
HSPG2-201ENST00000374673 NF1P21359 2839 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 H0YJW9 148 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 IFNA6P05013 189 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 AKAIN1P0CW23 69 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 TMEM11P17152 192 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 MC5RP33032 325 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 THBS3P49746 956 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 HES1Q14469 280 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 MEF2DQ14814 521 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 DHRS7BQ6IAN0 325 aaPredicted RBP12.01□□□□□ -0.49
HSPG2-201ENST00000374673 GLDNQ6ZMI3 551 aaPredicted RBP12.01□□□□□ -0.49
HSPG2-201ENST00000374673 LHFPL1Q86WI0 220 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 TMEM17Q86X19 198 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 MFSD4AQ8N468 514 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 Q8N6K4 173 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.01□□□□□ -0.49
HSPG2-201ENST00000374673 ZNF383Q8NA42 475 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 ZBTB34Q8NCN2 500 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 OR4D10Q8NGI6 311 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 SECTM1Q8WVN6 248 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 BORCS5Q969J3 196 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 ADTRPQ96IZ2 230 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 EAF1Q96JC9 268 aaPredicted RBP12.01□□□□□ -0.49
HSPG2-201ENST00000374673 SDHCQ99643 169 aaPredicted RBP12.01□□□□□ -0.49
HSPG2-201ENST00000374673 SLC25A33Q9BSK2 321 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 SLC5A7Q9GZV3 580 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 CCL28Q9NRJ3 127 aa12.01□□□□□ -0.49
HSPG2-201ENST00000374673 MOSP00540 346 aa12□□□□□ -0.49
HSPG2-201ENST00000374673 CRYBA1P05813 215 aa12□□□□□ -0.49
HSPG2-201ENST00000374673 ZNF735P0CB33 412 aa12□□□□□ -0.49
HSPG2-201ENST00000374673 DUTP33316 252 aaKnown RBP12□□□□□ -0.49
HSPG2-201ENST00000374673 TAGLNQ01995 201 aaKnown RBP12□□□□□ -0.49
HSPG2-201ENST00000374673 EIF4EBP1Q13541 118 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms