RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 PRAMEF6Q5VXH4 476 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 STUMQ69YW2 141 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 SLC25A24Q6NUK1 477 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 TMEM14EPQ6UXP3 125 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 CISD2Q8N5K1 135 aaKnown RBP7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 CD177Q8N6Q3 437 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 ST6GALNAC3Q8NDV1 305 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 OR10P1Q8NGE3 313 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 OR4S2Q8NH73 311 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 TNFRSF14Q92956 283 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 TXNDC17Q9BRA2 123 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 SCNM1Q9BWG6 230 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 C1QTNF6Q9BXI9 259 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 SLC35B3Q9H1N7 401 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 HRH4Q9H3N8 390 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 CACNG5Q9UF02 275 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 TP53TG5Q9Y2B4 290 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 LINC00312Q9Y6C7 94 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 SHANK1Q9Y566 2161 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 WDFY3Q8IZQ1 3526 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 MUC3AQ02505 3323 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 EP300Q09472 2414 aaPredicted RBP7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 A0A0G2JNJ9 132 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 IGSF23A1L1A6 192 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 FAM24AA6NFZ4 105 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 B4DEV8 164 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 IGKV1-5P01602 117 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 IGHV1-46P01743 117 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 DAOP14920 347 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 ATP6V0CP27449 155 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 DUTP33316 252 aaKnown RBP7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 GLIPR1P48060 266 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 PAX9P55771 341 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 DEFA5Q01523 94 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 ZNF273Q14593 569 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 RHEBQ15382 184 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 GUCA2BQ16661 112 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 GUK1Q16774 197 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 VWC2Q2TAL6 325 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 KHDC3LQ587J8 217 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 RBMS3Q6XE24 437 aaKnown RBP7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 ZNF826PQ6ZT77 177 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 PRR18Q8N4B5 295 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 OR1L1Q8NH94 360 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 MRGPRDQ8TDS7 321 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 TCTEX1D2Q8WW35 142 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 MBD3L1Q8WWY6 194 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 DMRTA2Q96SC8 542 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 KCNJ16Q9NPI9 418 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 UFSP2Q9NUQ7 469 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 GFOD1Q9NXC2 390 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 CALYQ9NYX4 217 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 Q9UFV3 132 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 ZNF257Q9Y2Q1 563 aa7.26□□□□□ -1.25
SNRNP40-202ENST00000373720 ZNF292O60281 2723 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 TRBV23-1A0A0A0MS06 115 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 TRGV8A0A0C4DH27 118 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 CXorf65A6NEN9 183 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 MARCH11A6NNE9 402 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 ATP6V1G2-DDX39BF2Z307 99 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 H7C2Y5 167 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 TNFSF12O43508 249 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 WISP2O76076 250 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 IGKV1-39P01597 117 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 RBP4P02753 201 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 IGKV1D-39P04432 117 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 CHRNB4P30926 498 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 APOBEC3AP31941 199 aaPredicted RBP7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 DYNLT3P51808 116 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 LOXL3P58215 753 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 RAB11AP62491 216 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 ZNF616Q08AN1 781 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 FAM27E3Q08E93 113 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 PNRC1Q12796 327 aaPredicted RBP7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 XP32Q5T750 250 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 MOGAT3Q86VF5 341 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 MRPL41Q8IXM3 137 aaKnown RBP7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 BATF2Q8N1L9 274 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 LILRB2Q8N423 598 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 ZNF709Q8N972 641 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 Q8NA96 180 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 OR13A1Q8NGR1 328 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 DTD1Q8TEA8 209 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 PCNPQ8WW12 178 aaKnown RBP7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 ITLN1Q8WWA0 313 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 RNASE6Q93091 150 aaKnown RBP7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 NEIL1Q96FI4 390 aaPredicted RBP7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 SSX3Q99909 188 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 TMEM147Q9BVK8 224 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 SMCO4Q9NRQ5 59 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 IDI2-AS1Q9NZ38 188 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 COQ3Q9NZJ6 369 aa7.25□□□□□ -1.25
SNRNP40-202ENST00000373720 VPS13AQ96RL7 3174 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 PPIAL4EA0A075B759 164 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 RBFOX3A6NFN3 312 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 PPIAL4DF5H284 164 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 INS-IGF2F8WCM5 200 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 WNT9BO14905 357 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 SPRY3O43610 288 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 ZNF205O95201 554 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms