RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 SIGMAR1Q99720 223 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 PATZ1Q9HBE1 687 aaKnown RBP7.55□□□□□ -1.2
ATG4A-203ENST00000372232 DECR2Q9NUI1 292 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 TTC28Q96AY4 2481 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 UNC13CQ8NB66 2214 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 TRAV36DV7A0A075B6V5 113 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 FAM90A20PA6NIJ5 464 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 H7C1C5 153 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 KBTBD11O94819 623 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 NUDT14O95848 222 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 BGLAPP02818 100 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 PGCP20142 388 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 CD1BP29016 333 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 SFTPDP35247 375 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 YPEL3P61236 119 aaPredicted RBP7.54□□□□□ -1.2
ATG4A-203ENST00000372232 LCN6P62502 163 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 FFAR4Q5NUL3 377 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 SHISA6Q6ZSJ9 500 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 CDC20BQ86Y33 519 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 OR6N2Q8NGY6 317 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 SMIM7Q9BQ49 75 aa7.54□□□□□ -1.2
ATG4A-203ENST00000372232 H3BSH0 61 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 HS3ST1O14792 307 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 XRCC2O43543 280 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 GP1BBP13224 206 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 TIMP3P35625 211 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 KRTDAPP60985 99 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 HIST3H3Q16695 136 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 WDR38Q5JTN6 314 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 UFSP1Q6NVU6 142 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 LYPD6Q86Y78 171 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 OR2Z1Q8NG97 314 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 FOXN4Q96NZ1 517 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 TMEM140Q9NV12 185 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 PPP1R3CQ9UQK1 317 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 BDP1A6H8Y1 2624 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 RP1P56715 2156 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 DUXBA0A1W2PPF3 345 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 ZFP92A6NM28 416 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 ZNF785A8K8V0 405 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 ZNF253O75346 499 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 TSPAN13O95857 204 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 RENP00797 406 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 HLA-HP01893 362 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 LIPFP07098 398 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 LHX2P50458 406 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 RHBDD2Q6NTF9 364 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 TEPPQ6URK8 271 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 DPY19L4Q7Z388 723 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 OR52M1Q8NGK5 317 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 SAMD10Q9BYL1 202 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 TAS2R4Q9NYW5 299 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 ARID1BQ8NFD5 2236 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-203ENST00000372232 MUC3AQ02505 3323 aa7.53□□□□□ -1.2
ATG4A-203ENST00000372232 MPDZO75970 2070 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 IGLV3-12A0A075B6K2 115 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 IGHV3-20A0A0C4DH32 117 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 GRIFINA4D1Z8 144 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 LRRC3CA6NJW4 275 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 SH2D1BO14796 132 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 MT-ATP6P00846 226 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 GPX1P07203 203 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 C1QTNF9P0C862 333 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 ALOX5APP20292 161 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 S100GP29377 79 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 ZNF93P35789 620 aaPredicted RBP7.52□□□□□ -1.2
ATG4A-203ENST00000372232 SMAGPQ0VAQ4 97 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 Q0VG73 95 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 RTP5Q14D33 572 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 SGCBQ16585 318 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 SIGLECL1Q8N7X8 197 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 OR5H2Q8NGV7 314 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 C11orf1Q9H5F2 150 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 WDR76Q9H967 626 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 DHDHQ9UQ10 334 aa7.52□□□□□ -1.2
ATG4A-203ENST00000372232 TMED7-TICAM2A0A0A6YYA0 188 aa7.52□□□□□ -1.21
ATG4A-203ENST00000372232 A0A0U1RQK1 487 aa7.52□□□□□ -1.21
ATG4A-203ENST00000372232 C11orf98E9PRG8 122 aa7.52□□□□□ -1.21
ATG4A-203ENST00000372232 ST8SIA3O43173 380 aa7.52□□□□□ -1.21
ATG4A-203ENST00000372232 HAND1O96004 215 aa7.52□□□□□ -1.21
ATG4A-203ENST00000372232 REG1AP05451 166 aa7.52□□□□□ -1.21
ATG4A-203ENST00000372232 TMEM267Q0VDI3 215 aaPredicted RBP7.52□□□□□ -1.21
ATG4A-203ENST00000372232 RAB31Q13636 194 aa7.52□□□□□ -1.21
ATG4A-203ENST00000372232 C16orf47Q6ZP98 133 aaPredicted RBP7.52□□□□□ -1.21
ATG4A-203ENST00000372232 MTURNQ8N3F0 131 aa7.52□□□□□ -1.21
ATG4A-203ENST00000372232 MBD3L1Q8WWY6 194 aa7.52□□□□□ -1.21
ATG4A-203ENST00000372232 SIGLEC12Q96PQ1 595 aa7.52□□□□□ -1.21
ATG4A-203ENST00000372232 ZNF665Q9H7R5 613 aa7.52□□□□□ -1.21
ATG4A-203ENST00000372232 MOB1AQ9H8S9 216 aa7.52□□□□□ -1.21
ATG4A-203ENST00000372232 PLEKHJ1Q9NW61 149 aa7.52□□□□□ -1.21
ATG4A-203ENST00000372232 PEF1Q9UBV8 284 aaKnown RBP7.52□□□□□ -1.21
ATG4A-203ENST00000372232 TRAV8-6A0A0B4J262 113 aa7.51□□□□□ -1.21
ATG4A-203ENST00000372232 CRYM-AS1A6NIL9 109 aa7.51□□□□□ -1.21
ATG4A-203ENST00000372232 KLRC4-KLRK1H3BQV0 150 aa7.51□□□□□ -1.21
ATG4A-203ENST00000372232 CD5LO43866 347 aa7.51□□□□□ -1.21
ATG4A-203ENST00000372232 RPS27P42677 84 aaKnown RBP7.51□□□□□ -1.21
ATG4A-203ENST00000372232 ASCL1P50553 236 aa7.51□□□□□ -1.21
ATG4A-203ENST00000372232 QRFPP83859 136 aa7.51□□□□□ -1.21
ATG4A-203ENST00000372232 UNC119Q13432 240 aa7.51□□□□□ -1.21
ATG4A-203ENST00000372232 ACKR1Q16570 336 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms