RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 ZNF674Q2M3X9 581 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 ZNF718Q3SXZ3 478 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 ZNRF1Q8ND25 227 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 SARAFQ96BY9 339 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 TMPRSS5Q9H3S3 457 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 RELNP78509 3460 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 ODAMA1E959 279 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 CEBPZOSA8MTT3 80 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 LMO1P25800 156 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 HOXA1P49639 335 aaPredicted RBP9.64□□□□□ -0.87
RAB39B-201ENST00000369454 HBG1P69891 147 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 HBG2P69892 147 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 ZNF726P1Q15940 193 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 NCMAPQ5T1S8 102 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 ZNF645Q8N7E2 425 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 NIPSNAP3BQ9BS92 247 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 CXXC4Q9H2H0 198 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 SLC25A22Q9H936 323 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 ASCL3Q9NQ33 180 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 GNG12Q9UBI6 72 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 IGHV1-18A0A0C4DH31 117 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 LINC00473A8K010 186 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 SPRY3O43610 288 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 IGKV3-15P01624 115 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 SELLP14151 372 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 EGR1P18146 543 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 MSMPQ1L6U9 139 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 DEFB108BQ8NET1 73 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 LSM10Q969L4 123 aaKnown RBP9.64□□□□□ -0.87
RAB39B-201ENST00000369454 IFT22Q9H7X7 185 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 PROCRQ9UNN8 238 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 WIPI2Q9Y4P8 454 aa9.64□□□□□ -0.87
RAB39B-201ENST00000369454 IGHV2OR16-5A0A0B4J2B6 119 aa9.63□□□□□ -0.87
RAB39B-201ENST00000369454 MMP9P14780 707 aa9.63□□□□□ -0.87
RAB39B-201ENST00000369454 TNFRSF9Q07011 255 aa9.63□□□□□ -0.87
RAB39B-201ENST00000369454 NANPQ8TBE9 248 aa9.63□□□□□ -0.87
RAB39B-201ENST00000369454 RCC1LQ96I51 464 aaKnown RBP9.63□□□□□ -0.87
RAB39B-201ENST00000369454 OOEPA6NGQ2 149 aa9.63□□□□□ -0.87
RAB39B-201ENST00000369454 IGHG3P01860 377 aa9.63□□□□□ -0.87
RAB39B-201ENST00000369454 RHEBQ15382 184 aa9.63□□□□□ -0.87
RAB39B-201ENST00000369454 ACSF3Q4G176 576 aaPredicted RBP9.63□□□□□ -0.87
RAB39B-201ENST00000369454 CD177Q8N6Q3 437 aa9.63□□□□□ -0.87
RAB39B-201ENST00000369454 MUC6Q6W4X9 2439 aa9.63□□□□□ -0.87
RAB39B-201ENST00000369454 MDKP21741 143 aaPredicted RBP9.62□□□□□ -0.87
RAB39B-201ENST00000369454 BRWD1-AS2P59051 145 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 H2BFWTQ7Z2G1 175 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 ZNF561Q8N587 486 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 SH3BGRL2Q9UJC5 107 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 ZGRF1Q86YA3 2104 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 ARFGEF3Q5TH69 2177 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 PRR33A8MZF0 331 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 ACAA1P09110 424 aaPredicted RBP9.62□□□□□ -0.87
RAB39B-201ENST00000369454 CLEC12BQ2HXU8 276 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 UTF1Q5T230 341 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 STARD4Q96DR4 205 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 COA4Q9NYJ1 87 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 DKK4Q9UBT3 224 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 TGIF2-C20orf24A0A0A6YYL0 155 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 TMEM210A6NLX4 147 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 NPIPB11E5RHQ5 1161 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 FCGR3BO75015 233 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 SMIM21Q3B7S5 101 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 OR5T1Q8NG75 326 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 LHX4Q969G2 390 aa9.62□□□□□ -0.87
RAB39B-201ENST00000369454 SMCO3A2RU48 225 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 MAP1LC3B2A6NCE7 125 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 RNF212BA8MTL3 300 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 TNFSF13O75888 250 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 IFNA17P01571 189 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 IGKV1D-33P01593 117 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 IGKV1-33P01594 117 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 HBE1P02100 147 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 CXCL1P09341 107 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 PRDX2P32119 198 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 CD200P41217 278 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 MEOX2P50222 304 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 CATR1Q13166 79 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 PDZD11Q5EBL8 140 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 BHLHA15Q7RTS1 189 aaPredicted RBP9.61□□□□□ -0.87
RAB39B-201ENST00000369454 MOGAT3Q86VF5 341 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 GATAD1Q8WUU5 269 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 TAF15Q92804 592 aaKnown RBP eCLIP9.61□□□□□ -0.87
RAB39B-201ENST00000369454 MAP1LC3BQ9GZQ8 125 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 WDR61Q9GZS3 305 aaKnown RBP9.61□□□□□ -0.87
RAB39B-201ENST00000369454 SLC39A9Q9NUM3 307 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 ERVFRD-1P60508 538 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 TFF3Q07654 80 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 RPL39P5Q59GN2 51 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 NCR3LG1Q68D85 454 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 DTD1Q8TEA8 209 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 Q8WTZ3 238 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 TVP23CQ96ET8 276 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 YLPM1P49750 1951 aaKnown RBP9.61□□□□□ -0.87
RAB39B-201ENST00000369454 BTBD17A6NE02 478 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 K7EM74 188 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 SOX15O60248 233 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 YIF1AO95070 293 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 LRRC75BQ2VPJ9 315 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 C4orf17Q53FE4 359 aa9.61□□□□□ -0.87
RAB39B-201ENST00000369454 ZNF506Q5JVG8 444 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms