RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 NOTCH2Q04721 2471 aa10.05□□□□□ -0.8
TUBE1-202ENST00000368662 ABCA2Q9BZC7 2435 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 SAA2-SAA4A0A096LPE2 208 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 TNFSF12O43508 249 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 IGLV1-47P01700 117 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 SAA2P0DJI9 122 aaPredicted RBP10.04□□□□□ -0.8
TUBE1-202ENST00000368662 MMP9P14780 707 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 BCAP31P51572 246 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 ZNF137PP52743 207 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 SRPXP78539 464 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 HLA-DRB5Q30154 266 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 DCAF12L2Q5VW00 463 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 CADM3Q8N126 398 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 OR52B4Q8NGK2 314 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 COQ8AQ8NI60 647 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 PRRC2AP48634 2157 aaKnown RBP10.04□□□□□ -0.8
TUBE1-202ENST00000368662 A0A0B4J2A0 478 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 H0Y980 276 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 GZMKP49863 264 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 ODF3L1Q8IXM7 274 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 PNKDQ8N490 385 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 C12orf45Q8N5I9 185 aaPredicted RBP10.04□□□□□ -0.8
TUBE1-202ENST00000368662 CASTOR1Q8WTX7 329 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 ADTRPQ96IZ2 230 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 PCGF1Q9BSM1 259 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 MED28Q9H204 178 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 FAM212BQ9NTI7 297 aaPredicted RBP10.04□□□□□ -0.8
TUBE1-202ENST00000368662 HIF1ANQ9NWT6 349 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 SHPKQ9UHJ6 478 aa10.04□□□□□ -0.8
TUBE1-202ENST00000368662 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.04□□□□□ -0.85e-7■■■■■ 28.4
TUBE1-202ENST00000368662 OR5AC1P0C628 307 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 TRAPPC2P0DI81 140 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 TRAPPC2BP0DI82 140 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 COX7A1P24310 79 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 RRAS2P62070 204 aaPredicted RBP10.03□□□□□ -0.8
TUBE1-202ENST00000368662 EIF4EBP1Q13541 118 aaPredicted RBP10.03□□□□□ -0.8
TUBE1-202ENST00000368662 SLC9A3R2Q15599 337 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 ZNF833PQ6ZTB9 187 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 WFDC11Q8NEX6 87 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 OR51H1Q8NH63 302 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 TMEM222Q9H0R3 208 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 M0R1X1 148 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 DUTP33316 252 aaKnown RBP10.03□□□□□ -0.8
TUBE1-202ENST00000368662 TMEM249Q2WGJ8 235 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 RPL39P5Q59GN2 51 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 CD300LFQ8TDQ1 290 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 CHAC2Q8WUX2 184 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 C5orf30Q96GV9 206 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 ZNF251Q9BRH9 671 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 PRELID3BQ9Y3B1 194 aa10.03□□□□□ -0.8
TUBE1-202ENST00000368662 HMX3A6NHT5 357 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 ODF3BA8MYP8 253 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 BUB1B-PAK6H3BSN5 160 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 J3QLI3 93 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 TXNL1O43396 289 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 ARG1P05089 322 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 SERPINE2P07093 398 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 RPA2P15927 270 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 HOXB4P17483 251 aaPredicted RBP10.02□□□□□ -0.81
TUBE1-202ENST00000368662 CEACAM3P40198 252 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 KIR2DS2P43631 304 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 THBS3P49746 956 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 UBE2E1P51965 193 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 TAGLNQ01995 201 aaKnown RBP10.02□□□□□ -0.81
TUBE1-202ENST00000368662 TMEM187Q14656 261 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 LIAT1Q6ZQX7 453 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 OR4P4Q8NGL7 312 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 GLYATL2Q8WU03 294 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 TCTEX1D2Q8WW35 142 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 TP53RKQ96S44 253 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 TBX15Q96SF7 602 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 AUP1Q9Y679 476 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 FLNBO75369 2602 aaKnown RBP10.02□□□□□ -0.81
TUBE1-202ENST00000368662 ITPR3Q14573 2671 aa10.02□□□□□ -0.81
TUBE1-202ENST00000368662 RNASEK-C17orf49H0YIS7 233 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 PROP1O75360 226 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 ZNF16P17020 682 aaPredicted RBP10.01□□□□□ -0.81
TUBE1-202ENST00000368662 UCP1P25874 307 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 HTR1DP28221 377 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 LGI3Q8N145 548 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 LRTM2Q8N967 370 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 UXS1Q8NBZ7 420 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 IL22RA2Q969J5 263 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 ST6GALNAC6Q969X2 333 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 MSI2Q96DH6 328 aaKnown RBP10.01□□□□□ -0.81
TUBE1-202ENST00000368662 LEUTXA8MZ59 168 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 CDS2O95674 445 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 TGFAP01135 160 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 IGHV4-31P0DP07 118 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 DLX1P56177 255 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 LGALS4P56470 323 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 ANKRD55Q3KP44 614 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 SP6Q3SY56 376 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 MINOS1Q5TGZ0 78 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 HCP5Q6MZN7 132 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 LIN54Q6MZP7 749 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 TGIF2LXQ8IUE1 241 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 TMEM56Q96MV1 263 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 GPHA2Q96T91 129 aa10.01□□□□□ -0.81
TUBE1-202ENST00000368662 C7orf69Q9H7B7 122 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms