RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PROP1O75360 226 aa11.17□□□□□ -0.62
TPM3-211ENST00000368531 AMY2AP04746 511 aa11.17□□□□□ -0.62
TPM3-211ENST00000368531 SNRNP70P08621 437 aaKnown RBP11.17□□□□□ -0.62
TPM3-211ENST00000368531 INPP1P49441 399 aa11.17□□□□□ -0.62
TPM3-211ENST00000368531 UBA52P62987 128 aaKnown RBP11.17□□□□□ -0.62
TPM3-211ENST00000368531 BAK1Q16611 211 aa11.17□□□□□ -0.62
TPM3-211ENST00000368531 FBLN7Q53RD9 439 aa11.17□□□□□ -0.62
TPM3-211ENST00000368531 DHRS11Q6UWP2 260 aa11.17□□□□□ -0.62
TPM3-211ENST00000368531 TMEM219Q86XT9 240 aa11.17□□□□□ -0.62
TPM3-211ENST00000368531 MFSD4AQ8N468 514 aa11.17□□□□□ -0.62
TPM3-211ENST00000368531 CFHR4Q92496 578 aa11.17□□□□□ -0.62
TPM3-211ENST00000368531 C5orf30Q96GV9 206 aa11.17□□□□□ -0.62
TPM3-211ENST00000368531 NABP2Q9BQ15 211 aa11.17□□□□□ -0.62
TPM3-211ENST00000368531 AKIP1Q9NQ31 210 aa11.17□□□□□ -0.62
TPM3-211ENST00000368531 CCL28Q9NRJ3 127 aa11.17□□□□□ -0.62
TPM3-211ENST00000368531 NSD1Q96L73 2696 aaPredicted RBP11.17□□□□□ -0.62
TPM3-211ENST00000368531 A0A0A6YYJ9 748 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 LINC00854A0A1B0GVQ3 168 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 ANKRD20A5PA0PJZ0 165 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 TRIM77I1YAP6 450 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 TXNL1O43396 289 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 IGKV1D-33P01593 117 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 IGKV1-33P01594 117 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 AKAIN1P0CW23 69 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 CT45A6P0DMU7 189 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 CT45A5P0DMU8 189 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 CT45A7P0DMV0 189 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 AANATQ16613 207 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 SCGB2B2Q4G0G5 96 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 VAX1Q5SQQ9 334 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 ZNF57Q68EA5 555 aaPredicted RBP11.16□□□□□ -0.62
TPM3-211ENST00000368531 ZNF660Q6AZW8 331 aaPredicted RBP11.16□□□□□ -0.62
TPM3-211ENST00000368531 GDPD1Q8N9F7 314 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 OR4C16Q8NGL9 310 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 OR5R1Q8NH85 324 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 TRIM63Q969Q1 353 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 GPHA2Q96T91 129 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 SDHCQ99643 169 aaPredicted RBP11.16□□□□□ -0.62
TPM3-211ENST00000368531 GHITMQ9H3K2 345 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 VPREB3Q9UKI3 123 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 POMT1Q9Y6A1 747 aa11.16□□□□□ -0.62
TPM3-211ENST00000368531 MTORP42345 2549 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 OR5H14A6NHG9 310 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 TNFSF12O43508 249 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 CD74P04233 296 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 FAM106CPP0CH98 169 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 TBPP20226 339 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 DYNLT3P51808 116 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 LSAMPQ13449 338 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 TRIQKQ629K1 86 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 FAM71F2Q6NXP2 309 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 CCBE1Q6UXH8 406 aaPredicted RBP11.15□□□□□ -0.62
TPM3-211ENST00000368531 TOMM5Q8N4H5 51 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 TMEM86BQ8N661 226 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 ZNF645Q8N7E2 425 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.15□□□□□ -0.62
TPM3-211ENST00000368531 S100ZQ8WXG8 99 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 TAF15Q92804 592 aaKnown RBP eCLIP11.15□□□□□ -0.62
TPM3-211ENST00000368531 MOB3AQ96BX8 217 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 FXYD6Q9H0Q3 95 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 MCUBQ9NWR8 336 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 ZNF107Q9UII5 783 aaPredicted RBP11.15□□□□□ -0.62
TPM3-211ENST00000368531 GAB2Q9UQC2 676 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 TCF19Q9Y242 345 aa11.15□□□□□ -0.62
TPM3-211ENST00000368531 A6NDX4 124 aa11.14□□□□□ -0.63
TPM3-211ENST00000368531 DISC1C4P0D8 188 aa11.14□□□□□ -0.63
TPM3-211ENST00000368531 H7C2Y5 167 aa11.14□□□□□ -0.63
TPM3-211ENST00000368531 GPR137BO60478 399 aa11.14□□□□□ -0.63
TPM3-211ENST00000368531 ZNF735P0CB33 412 aa11.14□□□□□ -0.63
TPM3-211ENST00000368531 PGAM2P15259 253 aa11.14□□□□□ -0.63
TPM3-211ENST00000368531 TMEM11P17152 192 aa11.14□□□□□ -0.63
TPM3-211ENST00000368531 CD1BP29016 333 aa11.14□□□□□ -0.63
TPM3-211ENST00000368531 PPP5CP53041 499 aa11.14□□□□□ -0.63
TPM3-211ENST00000368531 KLF9Q13886 244 aaPredicted RBP11.14□□□□□ -0.63
TPM3-211ENST00000368531 MEF2DQ14814 521 aa11.14□□□□□ -0.63
TPM3-211ENST00000368531 C16orf87Q6PH81 154 aa11.14□□□□□ -0.63
TPM3-211ENST00000368531 LINC00299Q6ZSB3 139 aa11.14□□□□□ -0.63
TPM3-211ENST00000368531 ZNF383Q8NA42 475 aa11.14□□□□□ -0.63
TPM3-211ENST00000368531 SVEP1Q4LDE5 3571 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 FAM181BA6NEQ2 426 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 FAM90A9PA6NNJ1 464 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 CLDN34H7C241 214 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 CHST1O43916 411 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 SLC22A5O76082 557 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 IGLV2-14P01704 120 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 CRYBA1P05813 215 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 RNASE1P07998 156 aaKnown RBP11.13□□□□□ -0.63
TPM3-211ENST00000368531 GNRHRP30968 328 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 AP3S2P59780 193 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 ZNF846Q147U1 533 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 OR2B11Q5JQS5 317 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 ZNF818PQ6ZRF7 136 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 THNSL2Q86YJ6 484 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 ARRDC1Q8N5I2 433 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 OR51S1Q8NGJ8 323 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 OR2T10Q8NGZ9 312 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 FAM216AQ8WUB2 273 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 EAF1Q96JC9 268 aaPredicted RBP11.13□□□□□ -0.63
TPM3-211ENST00000368531 SLC25A33Q9BSK2 321 aa11.13□□□□□ -0.63
TPM3-211ENST00000368531 HRASLSQ9HDD0 168 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms