RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 CRISP2P16562 243 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 SCARF2Q96GP6 870 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-207ENST00000368226 CDS2O95674 445 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 UNC119Q13432 240 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 HIST3H3Q16695 136 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 GCSAMQ8N6F7 178 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 APCDD1LQ8NCL9 501 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 CTHRC1Q96CG8 243 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 SFXN3Q9BWM7 321 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 CHCHD2Q9Y6H1 151 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-207ENST00000368226 PGLYRP1O75594 196 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-207ENST00000368226 IGKV3-20P01619 116 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 MMP9P14780 707 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 FCGR2BP31994 310 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-207ENST00000368226 MRPL30Q8TCC3 161 aaKnown RBP11.06□□□□□ -0.64
PTPRK-207ENST00000368226 TRBV5-5A0A0J9YX44 114 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 C1QL1O75973 258 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 HLA-DQB1P01920 261 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 LINC00869P0C866 280 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 RPL8P62917 257 aaKnown RBP11.06□□□□□ -0.64
PTPRK-207ENST00000368226 MARS2Q96GW9 593 aaKnown RBP11.06□□□□□ -0.64
PTPRK-207ENST00000368226 ZNF703Q9H7S9 590 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-207ENST00000368226 G6PC2Q9NQR9 355 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 PIKFYVEQ9Y2I7 2098 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 CABIN1Q9Y6J0 2220 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 SMPD2O60906 423 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 HIST1H1BP16401 226 aaKnown RBP11.05□□□□□ -0.64
PTPRK-207ENST00000368226 HLA-DRB5Q30154 266 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 OR52M1Q8NGK5 317 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 SVILO95425 2214 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 hCG_38984A0A1B0GV85 526 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 H3BQ15 152 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 MIC13Q5XKP0 118 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 GPX7Q96SL4 187 aaPredicted RBP11.05□□□□□ -0.64
PTPRK-207ENST00000368226 IGHV3-66A0A0C4DH42 116 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 MFSD2BA6NFX1 497 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 LEUTXA8MZ59 168 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 FSTP19883 344 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 RND2P52198 227 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 WDR73Q6P4I2 378 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 DCTN5Q9BTE1 182 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 SEC11CQ9BY50 192 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 IGKV1D-43A0A0B4J1Z2 117 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 S1PR2O95136 353 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 HSPB1P04792 205 aaKnown RBP11.05□□□□□ -0.64
PTPRK-207ENST00000368226 RIGQ13278 110 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 IQCJQ1A5X6 159 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 OR10C1Q96KK4 312 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 SNURFLB1AK76 121 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 KLF4O43474 513 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 PITX3O75364 302 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 RNF212Q495C1 297 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 RHOVQ96L33 236 aa11.05□□□□□ -0.64
PTPRK-207ENST00000368226 EBLN2Q6P2I7 272 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 SSX8Q7RTT4 187 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 METTL26Q96S19 204 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 MESP1Q9BRJ9 268 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 LY6DQ14210 128 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 SLC16A13Q7RTY0 426 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 DSPPQ9NZW4 1301 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 PIN1P1O15428 100 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 ZG16O60844 167 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 SCGB1D4Q6XE38 83 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 FGFRL1Q8N441 504 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 IGHV3-49A0A0A0MS15 119 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 H0Y980 276 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 THY1P04216 161 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 PDLIM4P50479 330 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 BSPH1Q075Z2 132 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 RPL39P5Q59GN2 51 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 GPR146Q96CH1 333 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 CKAP5Q14008 2032 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 CTXND1A0A1B0GTU2 59 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 ZNF735P0CB33 412 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 TMEM54Q969K7 222 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 NPVFQ9HCQ7 196 aa11.04□□□□□ -0.64
PTPRK-207ENST00000368226 TMEM218A2RU14 115 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 SYNGR3O43761 229 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 PDE6DO43924 150 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 CELA3BP08861 270 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 CCKARP32238 428 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 IFITM3Q01628 133 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 Q6ZN92 141 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 ANAPC16Q96DE5 110 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 APCSP02743 223 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 ZNF250P15622 560 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 PSMB2P49721 201 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 LRRC75BQ2VPJ9 315 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 SLC25A38Q96DW6 304 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 OR2A4O95047 310 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 KLK2P20151 261 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 ZNF818PQ6ZRF7 136 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 CENPVQ7Z7K6 275 aaPredicted RBP11.03□□□□□ -0.64
PTPRK-207ENST00000368226 OR5AU1Q8NGC0 362 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 OR2A7Q96R45 310 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 MIOXQ9UGB7 285 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 CDKN1AP38936 164 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 TMEM222Q9H0R3 208 aa11.03□□□□□ -0.64
PTPRK-207ENST00000368226 ZNF107Q9UII5 783 aaPredicted RBP11.03□□□□□ -0.64
PTPRK-207ENST00000368226 CXCL2P19875 107 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms