RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 NPY4RP50391 375 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 TAS2R31P59538 309 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 C11orf71Q6IPW1 123 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 TMED4Q7Z7H5 227 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 COQ2Q96H96 371 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 OTOGQ6ZRI0 2925 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 KIAA2026Q5HYC2 2103 aa10.06□□□□□ -0.8
USF1-203ENST00000368021 FXYD6-FXYD2A0A087WZ82 144 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 A0A087X0M5 115 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 IGHV1-69-2A0A0G2JMI3 117 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 A0A1B0GX30 115 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 MGST3O14880 152 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 DANCRP0C864 163 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 FCGR2CP31995 323 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 RBMXP38159 391 aaKnown RBP10.05□□□□□ -0.8
USF1-203ENST00000368021 UCP3P55916 312 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 SRSF4Q08170 494 aaKnown RBP10.05□□□□□ -0.8
USF1-203ENST00000368021 HERPUD1Q15011 391 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 TMEM128Q5BJH2 165 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 C9orf152Q5JTZ5 239 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 FAM201AQ5SY85 155 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 TGIF2LYQ8IUE0 185 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 COMMD1Q8N668 190 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 SLC24A4Q8NFF2 622 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 OR5D13Q8NGL4 314 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 MOB3AQ96BX8 217 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 FXYD6Q9H0Q3 95 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 FAM234AQ9H0X4 552 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 C5orf66Q9H5L9 145 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 ZNF69Q9UC07 566 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 TRBV6-7A0A0A0MS04 114 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 IGKV1-6A0A0C4DH72 117 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 RNF222A6NCQ9 220 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 TUSC2O75896 110 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 FSTL3O95633 263 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 METTL15P1P0C7V9 234 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 AESQ08117 197 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 TRAT1Q6PIZ9 186 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 ZNF788Q6ZQV5 615 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 CCL17Q92583 94 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 RAB1BQ9H0U4 201 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 ZNF665Q9H7R5 613 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 PLEKHF2Q9H8W4 249 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 UBTD1Q9HAC8 227 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 UQCC1Q9NVA1 299 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 KCNIP1Q9NZI2 227 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 COMMD9Q9P000 198 aa10.05□□□□□ -0.8
USF1-203ENST00000368021 PPIAL4EA0A075B759 164 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 PPIAL4DF5H284 164 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 SPDEFO95238 335 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 PPYP01298 95 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 CD8AP01732 235 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 TFF1P04155 84 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 SOD3P08294 240 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 PPIAL4FP0DN26 164 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 PJVKQ0ZLH3 352 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 DHRS2Q13268 280 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 RHEBQ15382 184 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 MUC20Q8N307 709 aaPredicted RBP10.04□□□□□ -0.8
USF1-203ENST00000368021 ZNRF1Q8ND25 227 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 GAFA1Q96PS6 74 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 RTBDNQ9BSG5 229 aaPredicted RBP10.04□□□□□ -0.8
USF1-203ENST00000368021 CHIAQ9BZP6 476 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 TAF9BQ9HBM6 251 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 C14orf166Q9Y224 244 aaKnown RBP10.04□□□□□ -0.8
USF1-203ENST00000368021 PPIAL4AQ9Y536 164 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 MYO9AB2RTY4 2548 aa10.04□□□□□ -0.8
USF1-203ENST00000368021 SIGLEC5O15389 551 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 PPIHO43447 177 aaKnown RBP10.03□□□□□ -0.8
USF1-203ENST00000368021 HLA-AP01891 365 aaKnown RBP10.03□□□□□ -0.8
USF1-203ENST00000368021 CTSDP07339 412 aaPredicted RBP10.03□□□□□ -0.8
USF1-203ENST00000368021 OR8U8P0C7N1 319 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 PGAM2P15259 253 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 NDUFB7P17568 137 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 ZBTB25P24278 435 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 HERV-K104P61576 105 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 IL13RA1P78552 427 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 DLK1P80370 383 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 MRPS11P82912 194 aaKnown RBP10.03□□□□□ -0.8
USF1-203ENST00000368021 CR1LQ2VPA4 569 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 AARDQ4LEZ3 155 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 ACOT7LQ6ZUV0 252 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 LYG2Q86SG7 212 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 ADAD2Q8NCV1 583 aaKnown RBP10.03□□□□□ -0.8
USF1-203ENST00000368021 OR52B4Q8NGK2 314 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 OR13D1Q8NGV5 346 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 OR10J5Q8NHC4 309 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 HIST1H2BAQ96A08 127 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 KIRREL1Q96J84 757 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 ODAMA1E959 279 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 NKX6-3A6NJ46 265 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 ZNF205O95201 554 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 GYPAP02724 150 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 ZNF728P0DKX0 622 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 TPT1P13693 172 aaKnown RBP10.03□□□□□ -0.8
USF1-203ENST00000368021 AKR1C4P17516 323 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 AADACP22760 399 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 GLIPR1P48060 266 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 PPP1R1AQ13522 171 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 ZNF546Q86UE3 836 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms