RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 HDHD3Q9BSH5 251 aaPredicted RBP10.84□□□□□ -0.67
TPR-201ENST00000367478 TREM2Q9NZC2 230 aa10.84□□□□□ -0.67
TPR-201ENST00000367478 NPFFO15130 113 aa10.84□□□□□ -0.67
TPR-201ENST00000367478 NDUFA2O43678 99 aa10.84□□□□□ -0.67
TPR-201ENST00000367478 CD1AP06126 327 aa10.84□□□□□ -0.67
TPR-201ENST00000367478 CX3CL1P78423 397 aa10.84□□□□□ -0.67
TPR-201ENST00000367478 HMGCLL1Q8TB92 370 aa10.84□□□□□ -0.67
TPR-201ENST00000367478 ZNF430Q9H8G1 570 aaPredicted RBP10.84□□□□□ -0.67
TPR-201ENST00000367478 CISD1Q9NZ45 108 aaKnown RBP10.84□□□□□ -0.67
TPR-201ENST00000367478 HCSTQ9UBK5 93 aa10.84□□□□□ -0.67
TPR-201ENST00000367478 ARL6IP6Q8N6S5 226 aa10.84□□□□□ -0.67
TPR-201ENST00000367478 ADAD2Q8NCV1 583 aaKnown RBP10.84□□□□□ -0.67
TPR-201ENST00000367478 MRPL24Q96A35 216 aaKnown RBP10.84□□□□□ -0.67
TPR-201ENST00000367478 GCSAMQ8N6F7 178 aa10.84□□□□□ -0.67
TPR-201ENST00000367478 PKIBQ9C010 78 aa10.84□□□□□ -0.67
TPR-201ENST00000367478 RGPD4Q7Z3J3 1758 aa10.83□□□□□ -0.67
TPR-201ENST00000367478 C7orf71A4D174 169 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 PNLIPP16233 465 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 INSL4Q14641 139 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 SAPCD1Q5SSQ6 148 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 IGHV3-13P01766 116 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 IGHV3-7P01780 117 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 MUC1P15941 1255 aaPredicted RBP10.83□□□□□ -0.68
TPR-201ENST00000367478 ARF6P62330 175 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 OR2H1Q9GZK4 316 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 MFAP4P55083 255 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 APOBEC4Q8WW27 367 aaKnown RBP10.83□□□□□ -0.68
TPR-201ENST00000367478 ZCCHC14Q8WYQ9 949 aaKnown RBP10.83□□□□□ -0.68
TPR-201ENST00000367478 GDF9O60383 454 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 NUTF2P61970 127 aaKnown RBP10.83□□□□□ -0.68
TPR-201ENST00000367478 WFDC3Q8IUB2 231 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 OR51G1Q8NGK1 321 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 A0A1B0GW15 77 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 PLAURQ03405 335 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 SRSF5Q13243 272 aaKnown RBP10.83□□□□□ -0.68
TPR-201ENST00000367478 RBM38Q9H0Z9 239 aaKnown RBP10.83□□□□□ -0.68
TPR-201ENST00000367478 PLA2G3Q9NZ20 509 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 MBD1Q9UIS9 605 aaPredicted RBP10.83□□□□□ -0.68
TPR-201ENST00000367478 NUBP1P53384 320 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 PGLYRP4Q96LB8 373 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 PRSS27Q9BQR3 290 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 PCGF1Q9BSM1 259 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 PRDM14Q9GZV8 571 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 NCOR1O75376 2440 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 DPRXA6NFQ7 191 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 HKR1P10072 659 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 MS4A4AQ96JQ5 239 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 FOXQ1Q9C009 403 aa10.83□□□□□ -0.68
TPR-201ENST00000367478 PDCD11Q14690 1871 aaKnown RBP10.82□□□□□ -0.68
TPR-201ENST00000367478 HBBP68871 147 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 SFXN3Q9BWM7 321 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 ELF5Q9UKW6 265 aaPredicted RBP10.82□□□□□ -0.68
TPR-201ENST00000367478 TRAV39A0A0B4J263 110 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 RBM11P57052 281 aaKnown RBP10.82□□□□□ -0.68
TPR-201ENST00000367478 OR2K2Q8NGT1 345 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 DNASE2BQ8WZ79 361 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 SPTAN1Q13813 2472 aaKnown RBP10.82□□□□□ -0.68
TPR-201ENST00000367478 SHISA8B8ZZ34 492 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 TNFRSF12AQ9NP84 129 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 PLSCR2Q9NRY7 297 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 ZGRF1Q86YA3 2104 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 TRBV23-1A0A0A0MS06 115 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 OR1K1Q8NGR3 316 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 TMEM171Q8WVE6 324 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 SMOC1Q9H4F8 434 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 IL36RNQ9UBH0 155 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 CCL2P13500 99 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 CLEC2AQ6UVW9 174 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 RHBDD2Q6NTF9 364 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 MS4A7Q9GZW8 240 aaPredicted RBP10.82□□□□□ -0.68
TPR-201ENST00000367478 TMEM222Q9H0R3 208 aa10.82□□□□□ -0.68
TPR-201ENST00000367478 FAM90A10PA6NDY2 464 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 FAM90A18PA6NE21 464 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 FAM90A16PA6NEW6 464 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 FAM90A20PA6NIJ5 464 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 FAM90A8PA6NJQ4 464 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 FAM90A7PA6NKC0 464 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 FAM90A22PA8MWA6 464 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 FAM90A12PA8MX19 464 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 FAM90A5PA8MXJ8 464 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 FAM90A23PA8MXZ1 464 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 EML2O95834 649 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 FAM90A15PP0C7V4 464 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 FAM90A13PP0C7W8 464 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 FAM90A14PP0C7W9 464 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 FAM90A24PP0C7X0 464 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 GLIPR1P48060 266 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 RNFT1Q5M7Z0 435 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 FAM71F2Q6NXP2 309 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 LINC00470Q9BZP3 86 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 PARLQ9H300 379 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 BEX4Q9NWD9 120 aaPredicted RBP10.81□□□□□ -0.68
TPR-201ENST00000367478 NPIPB8E9PQR5 432 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 NPIPB9F8W1W9 429 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 PRKNO60260 465 aaPredicted RBP10.81□□□□□ -0.68
TPR-201ENST00000367478 NPIPB7O75200 414 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 FCGR3AP08637 254 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 ZNF56Q15929 161 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 THSD4Q6ZMP0 1018 aa10.81□□□□□ -0.68
TPR-201ENST00000367478 LRTM2Q8N967 370 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms