RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 IGHV3-9P01782 118 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 HSPB1P04792 205 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 SMIM17P0DL12 118 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 IL3RAP26951 378 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 TBC1D26Q86UD7 250 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 R3HDM4Q96D70 268 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 GALNT14Q96FL9 552 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 MIEN1Q9BRT3 115 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 TAAR3PQ9P1P4 343 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 F8VVB4 439 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 F8VWA3 439 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 SIRPB1O00241 398 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 LMX1BO60663 402 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 PAGE4O60829 102 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 PSG4Q00888 419 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 TMEM45BQ96B21 275 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 C5orf66Q9H5L9 145 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 CARHSP1Q9Y2V2 147 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 J3QW42 95 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 SLC17A3O00476 420 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 AREGP15514 252 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 NUTF2P61970 127 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 FAM219AQ8IW50 185 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 MOB3AQ96BX8 217 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 MRPL18Q9H0U6 180 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 CDC42EP3Q9UKI2 254 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 PILRBQ9UKJ0 227 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 ZNF106Q9H2Y7 1883 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 SDK2Q58EX2 2172 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 OR2T8A6NH00 312 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 PRR32B1ATL7 298 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 LINC00614P0C842 121 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 GCSHP23434 173 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 RIGQ13278 110 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 EDDM3AQ14507 147 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 C1orf185Q5T7R7 199 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 CNEP1R1Q8N9A8 125 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 ZNF355PQ9NSJ1 428 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 SPTA1P02549 2419 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 UBE2CO00762 179 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 CA1P00915 261 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 MST1P26927 711 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 GNB1P62873 340 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 GLRX5Q86SX6 157 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 OR8G5Q8NG78 346 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 VCX2Q9H322 139 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 TMEM167BQ9NRX6 74 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 OR5AC2Q9NZP5 309 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 RNF222A6NCQ9 220 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 LRRC3CA6NJW4 275 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 J3QT63 122 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 SNRPCP09234 159 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 KLK2P20151 261 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 CEACAM21Q3KPI0 293 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 BHLHE23Q8NDY6 225 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 CPEB3Q8NE35 698 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 OR8B3Q8NGG8 313 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 MRPL30Q8TCC3 161 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 CT55Q8WUE5 264 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 OR2W1Q9Y3N9 320 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 GALR2O43603 387 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 GRPP07492 148 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 COX6A1P12074 109 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 GLIPR1P48060 266 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 RELQ04864 619 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 CALHM1Q8IU99 346 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 C1orf210Q8IVY1 113 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 UBALD1Q8TB05 177 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 JKAMPQ9P055 326 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 KCNMB2Q9Y691 235 aa4.64□□□□□ -1.67
CDC42BPA-204ENST00000366767 A6NNC1 897 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 TMEM50BP56557 158 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 ERASQ7Z444 233 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 MYOZ3Q8TDC0 251 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 RDH5Q92781 318 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 MARS2Q96GW9 593 aaKnown RBP4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 PKIBQ9C010 78 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 MEGF9Q9H1U4 602 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 IGKV1D-43A0A0B4J1Z2 117 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 OOEPA6NGQ2 149 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 FGF16O43320 207 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 BCL2P10415 239 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 BTF3P20290 206 aaKnown RBP4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 SRSF7Q16629 238 aaKnown RBP eCLIP4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 C12orf49Q9H741 205 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 KIAA1456Q9P272 454 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 ERRFI1Q9UJM3 462 aaPredicted RBP4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 TICRRQ7Z2Z1 1910 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 MEX3AA1L020 520 aaKnown RBP4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 CRYAAP02489 173 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 RND3P61587 244 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 UCN2Q96RP3 112 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 MT-ND6P03923 174 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 AMY1AP04745 511 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 SP1P08047 785 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 FOLR2P14207 255 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 KIR2DS2P43631 304 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 ANKRD55Q3KP44 614 aa4.63□□□□□ -1.67
CDC42BPA-204ENST00000366767 H1FOOQ8IZA3 346 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms