RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 MRPL27Q9P0M9 148 aaKnown RBP-2.01□□□□□ -2.73
RNU6-340P-201ENST00000364005 TNFSF18Q9UNG2 199 aa-2.01□□□□□ -2.73
RNU6-340P-201ENST00000364005 UNC13BO14795 1591 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 CUBNO60494 3623 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 SPG11Q96JI7 2443 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 TRAV8-3A0A0A6YYJ7 113 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 IGHV2-26A0A0B4J1V2 119 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 CCDC160A6NGH7 325 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 SIRPB1O00241 398 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 GPR31O00270 319 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 FAAHO00519 579 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 NDUFAB1O14561 156 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 PTTG1O95997 202 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 ASAH2BP0C7U1 165 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 ATP6V0CP27449 155 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 CA5AP35218 305 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 CLDN18P56856 261 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 RAB25P57735 213 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 SCGB2A2Q13296 93 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 NDUFA5Q16718 116 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 LINC01554Q52M75 96 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 TMEM31Q5JXX7 168 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 APRG1Q8IVJ8 170 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 RPP25LQ8N5L8 163 aaKnown RBP-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 SPATA4Q8NEY3 305 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 OR9G4Q8NGQ1 327 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 OR10Z1Q8NGY1 313 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 WFDC5Q8TCV5 224 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 RASSF5Q8WWW0 418 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 CCL17Q92583 94 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 ZMYND19Q96E35 227 aaPredicted RBP-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 FMC1Q96HJ9 113 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 RILPQ96NA2 401 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 EBNA1BP2Q99848 306 aaKnown RBP-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 TMEM43Q9BTV4 400 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 WDR54Q9H977 334 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 PTTG3PQ9NZH4 202 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 POMPQ9Y244 141 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 RBM7Q9Y580 266 aaKnown RBP-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 OR51B2Q9Y5P1 312 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 NBASA2RRP1 2371 aa-2.02□□□□□ -2.73
RNU6-340P-201ENST00000364005 GCN1Q92616 2671 aaKnown RBP-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 ITPR1Q14643 2758 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 TRBV6-4A0A1B0GX49 114 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 TMEM250H0YL14 139 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 H3BP45 60 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 UBE2L6O14933 153 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 POLR3GO15318 223 aaPredicted RBP-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 EIF3HO15372 352 aaKnown RBP eCLIP-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 CREBL2O60519 120 aaPredicted RBP-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 ERLIN1O75477 346 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 KRT16P08779 473 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 MT1HL1P0DM35 61 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 RABIFP47224 123 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 RBM11P57052 281 aaKnown RBP-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 YBEYP58557 167 aaPredicted RBP-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 RAB14P61106 215 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 RPL37P61927 97 aaKnown RBP-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 HTD2P86397 168 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 RPL18AQ02543 176 aaKnown RBP-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 CEP55Q53EZ4 464 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 THOC7Q6I9Y2 204 aaKnown RBP-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 EBLN2Q6P2I7 272 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 IDO2Q6ZQW0 420 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 ATP6V0BQ99437 205 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 AGMATQ9BSE5 352 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 FARSBQ9NSD9 589 aaKnown RBP-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 HHLA2Q9UM44 414 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 BAIAP2Q9UQB8 552 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 U3KQV3 271 aa-2.03□□□□□ -2.73
RNU6-340P-201ENST00000364005 IGHV2OR16-5A0A0B4J2B6 119 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 A0A0J9YW62 118 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 LINC00862A6NCI5 91 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 ZNF727A8MUV8 499 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 MGAMO43451 1857 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 CD160O95971 181 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 TNFP01375 233 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 FBP1P09467 338 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 IQCF3P0C7M6 154 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 ETV6P41212 452 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 IFNAR2P48551 515 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 STC1P52823 247 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 SEC61GP60059 68 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 FGF12P61328 243 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 ACACAQ13085 2346 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 SELENBP1Q13228 472 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 MAPK14Q16539 360 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 MIAQ16674 131 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 ACSM3Q53FZ2 586 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 IBA57Q5T440 356 aaKnown RBP-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 HAGHLQ6PII5 290 aaPredicted RBP-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 AMTNQ6UX39 209 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 FAM19A3Q7Z5A8 133 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 CCDC91Q7Z6B0 441 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 SPATA12Q7Z6I5 190 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 CRLF3Q8IUI8 442 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 TEX9Q8N6V9 391 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 OR4D11Q8NGI4 311 aa-2.04□□□□□ -2.74
RNU6-340P-201ENST00000364005 CASTOR1Q8WTX7 329 aa-2.04□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms