RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 MRPL18Q9H0U6 180 aaKnown RBP10.84□□□□□ -0.67
VAMP1-201ENST00000361716 GAL3ST2Q9H3Q3 398 aa10.84□□□□□ -0.67
VAMP1-201ENST00000361716 IGKV1-12A0A0C4DH73 117 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 SNURFLB1AK76 121 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 IGKV1D-12P01611 117 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 ATP5G3P48201 142 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 CNN3Q15417 329 aaKnown RBP10.83□□□□□ -0.68
VAMP1-201ENST00000361716 Q6ZRM9 215 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 AAED1Q7RTV5 226 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 ZNF738Q8NE65 137 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 LILRA5A6NI73 299 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 ETV2O00321 342 aaPredicted RBP10.83□□□□□ -0.68
VAMP1-201ENST00000361716 CRYABP02511 175 aaKnown RBP10.83□□□□□ -0.68
VAMP1-201ENST00000361716 DUSP3P51452 185 aaPredicted RBP10.83□□□□□ -0.68
VAMP1-201ENST00000361716 EDDM3BP56851 147 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 TPTE2P1Q5T6R2 138 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 ZNF611Q8N823 705 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 DNASE2BQ8WZ79 361 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 TAF15Q92804 592 aaKnown RBP eCLIP10.83□□□□□ -0.68
VAMP1-201ENST00000361716 MRPL13Q9BYD1 178 aaKnown RBP10.83□□□□□ -0.68
VAMP1-201ENST00000361716 RPH3ALQ9UNE2 315 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 TRAV38-1A0A0B4J264 116 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 LOC102725191A0A1B0GVB3 256 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 IGHMP01871 453 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 CFIP05156 583 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 CD27P26842 260 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 LTC4SQ16873 150 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 CEACAM16Q2WEN9 425 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 SAXO1Q8IYX7 474 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 ZNF525Q8N782 197 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 OR2M3Q8NG83 312 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 OR56B2PQ8NGI1 322 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 ZNF501Q96CX3 271 aaPredicted RBP10.83□□□□□ -0.68
VAMP1-201ENST00000361716 TWSG1Q9GZX9 223 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 NAT8BQ9UHF3 227 aa10.83□□□□□ -0.68
VAMP1-201ENST00000361716 TBL2Q9Y4P3 447 aaKnown RBP10.83□□□□□ -0.68
VAMP1-201ENST00000361716 IGHV1OR15-9A0A0B4J2B8 117 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 A0A1W2PPV4 95 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 SLC22A20A6NK97 555 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 H0Y8G0 127 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 KRASP01116 189 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 FRMD6-AS1P0C7T7 363 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 AARDQ4LEZ3 155 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 SPATA46Q5T0L3 261 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 LCN12Q6JVE5 192 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 SLC25A47Q6Q0C1 308 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 SERTAD4Q9NUC0 356 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 NXPH2O95156 264 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 CCL3P10147 92 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 SRP14P37108 136 aaKnown RBP10.82□□□□□ -0.68
VAMP1-201ENST00000361716 ACSM6Q6P461 480 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 FAM58AQ8N1B3 248 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 ZNF114Q8NC26 417 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 SPACA9Q96E40 222 aaPredicted RBP10.82□□□□□ -0.68
VAMP1-201ENST00000361716 RAB40CQ96S21 281 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 GPR27Q9NS67 375 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 BET1LQ9NYM9 111 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 FBXL7Q9UJT9 491 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 TCFL5Q9UL49 500 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 PI4KAP42356 2102 aa10.82□□□□□ -0.68
VAMP1-201ENST00000361716 FOXI3A8MTJ6 420 aaPredicted RBP10.81□□□□□ -0.68
VAMP1-201ENST00000361716 PDLIM4P50479 330 aa10.81□□□□□ -0.68
VAMP1-201ENST00000361716 KLF3P57682 345 aaPredicted RBP10.81□□□□□ -0.68
VAMP1-201ENST00000361716 GCSAMLQ5JQS6 135 aa10.81□□□□□ -0.68
VAMP1-201ENST00000361716 GUSBP11Q6P575 273 aa10.81□□□□□ -0.68
VAMP1-201ENST00000361716 SMIM15Q7Z3B0 74 aa10.81□□□□□ -0.68
VAMP1-201ENST00000361716 C20orf144Q9BQM9 153 aa10.81□□□□□ -0.68
VAMP1-201ENST00000361716 NKX6-3A6NJ46 265 aa10.81□□□□□ -0.68
VAMP1-201ENST00000361716 CBR3O75828 277 aa10.81□□□□□ -0.68
VAMP1-201ENST00000361716 PIAS2O75928 621 aa10.81□□□□□ -0.68
VAMP1-201ENST00000361716 TDGF1P13385 188 aa10.81□□□□□ -0.68
VAMP1-201ENST00000361716 ZP4Q12836 540 aa10.81□□□□□ -0.68
VAMP1-201ENST00000361716 PINX1Q96BK5 328 aaKnown RBP10.81□□□□□ -0.68
VAMP1-201ENST00000361716 CLN8Q9UBY8 286 aa10.81□□□□□ -0.68
VAMP1-201ENST00000361716 UQCR10Q9UDW1 63 aa10.81□□□□□ -0.68
VAMP1-201ENST00000361716 THADAQ6YHU6 1953 aa10.81□□□□□ -0.68
VAMP1-201ENST00000361716 PGLYRP1O75594 196 aaPredicted RBP10.81□□□□□ -0.68
VAMP1-201ENST00000361716 CCR5P51681 352 aa10.81□□□□□ -0.68
VAMP1-201ENST00000361716 RIPPLY3P57055 190 aa10.81□□□□□ -0.68
VAMP1-201ENST00000361716 PYGO2Q9BRQ0 406 aa10.81□□□□□ -0.68
VAMP1-201ENST00000361716 WDR61Q9GZS3 305 aaKnown RBP10.81□□□□□ -0.68
VAMP1-201ENST00000361716 PNRC2Q9NPJ4 139 aaKnown RBP10.81□□□□□ -0.68
VAMP1-201ENST00000361716 TRAV1-1A0A0B4J248 108 aa10.8□□□□□ -0.68
VAMP1-201ENST00000361716 ZNF253O75346 499 aa10.8□□□□□ -0.68
VAMP1-201ENST00000361716 NDUFB8O95169 186 aa10.8□□□□□ -0.68
VAMP1-201ENST00000361716 OTX1P32242 354 aaPredicted RBP10.8□□□□□ -0.68
VAMP1-201ENST00000361716 SOX8P57073 446 aa10.8□□□□□ -0.68
VAMP1-201ENST00000361716 Q56UQ5 140 aa10.8□□□□□ -0.68
VAMP1-201ENST00000361716 NMSQ5H8A3 153 aa10.8□□□□□ -0.68
VAMP1-201ENST00000361716 CRIP3Q6Q6R5 217 aa10.8□□□□□ -0.68
VAMP1-201ENST00000361716 S100A7AQ86SG5 101 aa10.8□□□□□ -0.68
VAMP1-201ENST00000361716 ZNF808Q8N4W9 903 aaPredicted RBP10.8□□□□□ -0.68
VAMP1-201ENST00000361716 ADPRHL1Q8NDY3 354 aa10.8□□□□□ -0.68
VAMP1-201ENST00000361716 IFI44Q8TCB0 444 aa10.8□□□□□ -0.68
VAMP1-201ENST00000361716 MBD3L1Q8WWY6 194 aa10.8□□□□□ -0.68
VAMP1-201ENST00000361716 BORCS7Q96B45 105 aa10.8□□□□□ -0.68
VAMP1-201ENST00000361716 LOXL4Q96JB6 756 aa10.8□□□□□ -0.68
VAMP1-201ENST00000361716 PXMP4Q9Y6I8 212 aa10.8□□□□□ -0.68
VAMP1-201ENST00000361716 C5orf49A4QMS7 147 aa10.8□□□□□ -0.68
VAMP1-201ENST00000361716 MGST1P10620 155 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms