RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 PATZ1Q9HBE1 687 aaKnown RBP11.79□□□□□ -0.52
CTR9-201ENST00000361367 ZNF319Q9P2F9 582 aa11.79□□□□□ -0.52
CTR9-201ENST00000361367 FAM208BQ5VWN6 2430 aa11.79□□□□□ -0.52
CTR9-201ENST00000361367 ZNF705FA8MVS1 300 aaPredicted RBP11.79□□□□□ -0.52
CTR9-201ENST00000361367 OR2C1O95371 312 aa11.79□□□□□ -0.52
CTR9-201ENST00000361367 ZNF705DP0CH99 300 aaPredicted RBP11.79□□□□□ -0.52
CTR9-201ENST00000361367 ZNF705BP0CI00 300 aaPredicted RBP11.79□□□□□ -0.52
CTR9-201ENST00000361367 FAM216BQ8N7L0 139 aa11.79□□□□□ -0.52
CTR9-201ENST00000361367 OR1B1Q8NGR6 318 aa11.79□□□□□ -0.52
CTR9-201ENST00000361367 NKX6-2Q9C056 277 aaPredicted RBP11.79□□□□□ -0.52
CTR9-201ENST00000361367 GHITMQ9H3K2 345 aa11.79□□□□□ -0.52
CTR9-201ENST00000361367 FANCMQ8IYD8 2048 aa11.79□□□□□ -0.52
CTR9-201ENST00000361367 HLA-GP17693 338 aa11.79□□□□□ -0.52
CTR9-201ENST00000361367 STARD4Q96DR4 205 aa11.79□□□□□ -0.52
CTR9-201ENST00000361367 WSB1Q9Y6I7 421 aa11.79□□□□□ -0.52
CTR9-201ENST00000361367 XKRY2A2RUG3 117 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 RNASEK-C17orf49H0YIS7 233 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 TRIM77I1YAP6 450 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 IL18BPO95998 194 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 TMEM30BQ3MIR4 351 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 PLAC9Q5JTB6 97 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 OR5B3Q8NH48 314 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 BLNKQ8WV28 456 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 TM2D1Q9BX74 207 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 CLEC7AQ9BXN2 247 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 MMP24Q9Y5R2 645 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 PIEZO1Q92508 2521 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 A0A087WV48 116 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 IGHV1-18A0A0C4DH31 117 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 EFNB1P98172 346 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 MRPL37Q9BZE1 423 aaKnown RBP11.78□□□□□ -0.52
CTR9-201ENST00000361367 ASCL3Q9NQ33 180 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 B3GALT5-AS1P59052 145 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 NECAP1Q8NC96 275 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 NRIP2Q9BQI9 281 aa11.78□□□□□ -0.52
CTR9-201ENST00000361367 HEATR1Q9H583 2144 aaKnown RBP11.78□□□□□ -0.52
CTR9-201ENST00000361367 SLC25A5P05141 298 aaKnown RBP11.77□□□□□ -0.52
CTR9-201ENST00000361367 P2RY4P51582 365 aa11.77□□□□□ -0.52
CTR9-201ENST00000361367 OR5I1Q13606 314 aa11.77□□□□□ -0.52
CTR9-201ENST00000361367 MMD2Q8IY49 270 aa11.77□□□□□ -0.52
CTR9-201ENST00000361367 FGFRL1Q8N441 504 aa11.77□□□□□ -0.52
CTR9-201ENST00000361367 PERPQ96FX8 193 aa11.77□□□□□ -0.52
CTR9-201ENST00000361367 CHRDL1Q9BU40 450 aa11.77□□□□□ -0.52
CTR9-201ENST00000361367 OR51I2Q9H344 312 aa11.77□□□□□ -0.52
CTR9-201ENST00000361367 K7ENP7 123 aa11.77□□□□□ -0.52
CTR9-201ENST00000361367 IGFBP3P17936 291 aaPredicted RBP11.77□□□□□ -0.52
CTR9-201ENST00000361367 RAB4AP20338 218 aa11.77□□□□□ -0.52
CTR9-201ENST00000361367 RPL8P62917 257 aaKnown RBP11.77□□□□□ -0.52
CTR9-201ENST00000361367 BAGE3Q86Y29 109 aa11.77□□□□□ -0.52
CTR9-201ENST00000361367 BAGE2Q86Y30 109 aa11.77□□□□□ -0.52
CTR9-201ENST00000361367 PNKDQ8N490 385 aa11.77□□□□□ -0.52
CTR9-201ENST00000361367 METTL1Q9UBP6 276 aaKnown RBP11.77□□□□□ -0.52
CTR9-201ENST00000361367 PQLC2LA1A4F0 135 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 IGHG3P01860 377 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 UBE2L3P68036 154 aaKnown RBP11.77□□□□□ -0.53
CTR9-201ENST00000361367 FAM78BQ5VT40 261 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 DCAF12L2Q5VW00 463 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 PIP4P1Q86T03 277 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 ZCCHC24Q8N2G6 241 aaKnown RBP11.77□□□□□ -0.53
CTR9-201ENST00000361367 TEX29Q8N6K0 151 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 SLC24A4Q8NFF2 622 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 Q8WTZ3 238 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 NUP210Q8TEM1 1887 aaPredicted RBP11.77□□□□□ -0.53
CTR9-201ENST00000361367 HSBP1L1C9JCN9 74 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 J3QRE1 110 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 SLC25A17O43808 307 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 CD74P04233 296 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 CRYGSP22914 178 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 C11orf91Q3C1V1 193 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 RNFT1Q5M7Z0 435 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 NABP1Q96AH0 204 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 LURAP1Q96LR2 239 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 PARP11Q9NR21 331 aa11.77□□□□□ -0.53
CTR9-201ENST00000361367 CDRT15L2A8MXV6 281 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 C12orf77C9JDV5 145 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 CDKN1AP38936 164 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 FGF8P55075 233 aaPredicted RBP11.76□□□□□ -0.53
CTR9-201ENST00000361367 TMEM186Q96B77 213 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 SAT2Q96F10 170 aaPredicted RBP11.76□□□□□ -0.53
CTR9-201ENST00000361367 LYZL4Q96KX0 146 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 C5orf66Q9H5L9 145 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 MMP26Q9NRE1 261 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 TRBV23-1A0A0A0MS06 115 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 IGHV3-21A0A0B4J1V1 117 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 IGKV1-9A0A0C4DH69 117 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 DNASE2O00115 360 aaPredicted RBP11.76□□□□□ -0.53
CTR9-201ENST00000361367 SPP1P10451 314 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 RNF2Q99496 336 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 CABLES2Q9BTV7 478 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 MBPP02686 304 aaPredicted RBP11.76□□□□□ -0.53
CTR9-201ENST00000361367 CCL1P22362 96 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 SPCS3P61009 180 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 OR5R1Q8NH85 324 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 TECRQ9NZ01 308 aaKnown RBP11.76□□□□□ -0.53
CTR9-201ENST00000361367 CACNA1AO00555 2505 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 ACACBO00763 2458 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 B2MP61769 119 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 TEPPQ6URK8 271 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 ZNF788Q6ZQV5 615 aa11.76□□□□□ -0.53
CTR9-201ENST00000361367 DTX1Q86Y01 620 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms