RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 NPIPB4C9JG80 1138 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 SYNGR1O43759 233 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 COL8A1P27658 744 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 ZNF137PP52743 207 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 LYZP61626 148 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 OR52L2PQ8NGH6 319 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 CORTO00230 105 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 FGF5P12034 268 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 SCARF2Q96GP6 870 aaPredicted RBP12.01□□□□□ -0.49
SMC5-201ENST00000361138 SHISA7A6NL88 538 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 SRIP30626 198 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 MOB3BQ86TA1 216 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 OR4X1Q8NH49 305 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 OR51B2Q9Y5P1 312 aa12.01□□□□□ -0.49
SMC5-201ENST00000361138 E9PQ18 207 aa12□□□□□ -0.49
SMC5-201ENST00000361138 Q1RN00 199 aa12□□□□□ -0.49
SMC5-201ENST00000361138 PQLC2Q6ZP29 291 aa12□□□□□ -0.49
SMC5-201ENST00000361138 CYP2G1PQ6ZSU1 146 aa12□□□□□ -0.49
SMC5-201ENST00000361138 HIST3H2BBQ8N257 126 aa12□□□□□ -0.49
SMC5-201ENST00000361138 ZFP30Q9Y2G7 519 aa12□□□□□ -0.49
SMC5-201ENST00000361138 CACNA1CQ13936 2221 aa12□□□□□ -0.49
SMC5-201ENST00000361138 RAB29O14966 203 aa12□□□□□ -0.49
SMC5-201ENST00000361138 LYZL6O75951 148 aa12□□□□□ -0.49
SMC5-201ENST00000361138 GAB4Q2WGN9 574 aa12□□□□□ -0.49
SMC5-201ENST00000361138 WFDC1Q9HC57 220 aa12□□□□□ -0.49
SMC5-201ENST00000361138 CKAP5Q14008 2032 aa12□□□□□ -0.49
SMC5-201ENST00000361138 TMEM265A0A087WTH1 108 aa12□□□□□ -0.49
SMC5-201ENST00000361138 SNRPCP09234 159 aaKnown RBP12□□□□□ -0.49
SMC5-201ENST00000361138 GZMHP20718 246 aa12□□□□□ -0.49
SMC5-201ENST00000361138 WNT5AP41221 380 aa12□□□□□ -0.49
SMC5-201ENST00000361138 TFF2Q03403 129 aa12□□□□□ -0.49
SMC5-201ENST00000361138 LRRC10Q5BKY1 277 aa12□□□□□ -0.49
SMC5-201ENST00000361138 OR10S1Q8NGN2 331 aa12□□□□□ -0.49
SMC5-201ENST00000361138 FAM216AQ8WUB2 273 aa12□□□□□ -0.49
SMC5-201ENST00000361138 PERPQ96FX8 193 aa12□□□□□ -0.49
SMC5-201ENST00000361138 GAL3ST2Q9H3Q3 398 aa12□□□□□ -0.49
SMC5-201ENST00000361138 FOXL2P58012 376 aa12□□□□□ -0.49
SMC5-201ENST00000361138 LRRC75BQ2VPJ9 315 aa12□□□□□ -0.49
SMC5-201ENST00000361138 SAXO1Q8IYX7 474 aa12□□□□□ -0.49
SMC5-201ENST00000361138 OR2M7Q8NG81 312 aa12□□□□□ -0.49
SMC5-201ENST00000361138 TMEM45BQ96B21 275 aa12□□□□□ -0.49
SMC5-201ENST00000361138 MIEN1Q9BRT3 115 aa12□□□□□ -0.49
SMC5-201ENST00000361138 CHD5Q8TDI0 1954 aa12□□□□□ -0.49
SMC5-201ENST00000361138 RPL11P62913 178 aaKnown RBP11.99□□□□□ -0.49
SMC5-201ENST00000361138 SSPNQ14714 243 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 MIC13Q5XKP0 118 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 NFAM1Q8NET5 270 aaPredicted RBP11.99□□□□□ -0.49
SMC5-201ENST00000361138 TMEM170AQ8WVE7 144 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 FLYWCH2Q96CP2 140 aaKnown RBP11.99□□□□□ -0.49
SMC5-201ENST00000361138 C17orf51A8MQB3 221 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 NDUFB3O43676 98 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 ADCYAP1P18509 176 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 IZUMO4Q1ZYL8 232 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 LYRM7Q5U5X0 104 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 SPINK14Q6IE38 97 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 IGKV1D-43A0A0B4J1Z2 117 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 NDUFS6O75380 124 aaKnown RBP11.99□□□□□ -0.49
SMC5-201ENST00000361138 OR2H2O95918 312 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 HBZP02008 142 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 IGHV4-34P06331 123 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 PRSS1P07477 247 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 OR2J1Q9GZK6 312 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 K7ESF4 209 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 ZG16O60844 167 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 CBLN1P23435 193 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 FXYD3Q14802 87 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 SPEM1Q8N4L4 309 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 TMEM54Q969K7 222 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 PAXXQ9BUH6 204 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 UQCRFS1P47985 274 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 ZSWIM8A7E2V4 1837 aa11.99□□□□□ -0.49
SMC5-201ENST00000361138 A0A0J9YW62 118 aa11.98□□□□□ -0.49
SMC5-201ENST00000361138 BTF3P20290 206 aaKnown RBP11.98□□□□□ -0.49
SMC5-201ENST00000361138 JOSD1Q15040 202 aaPredicted RBP11.98□□□□□ -0.49
SMC5-201ENST00000361138 MMD2Q8IY49 270 aa11.98□□□□□ -0.49
SMC5-201ENST00000361138 ATOH7Q8N100 152 aa11.98□□□□□ -0.49
SMC5-201ENST00000361138 TINAGQ9UJW2 476 aa11.98□□□□□ -0.49
SMC5-201ENST00000361138 OPN3Q9H1Y3 402 aaPredicted RBP11.98□□□□□ -0.49
SMC5-201ENST00000361138 WDR90Q96KV7 1748 aa11.98□□□□□ -0.49
SMC5-201ENST00000361138 TRPM6Q9BX84 2022 aa11.98□□□□□ -0.49
SMC5-201ENST00000361138 SLC25A34Q6PIV7 304 aa11.98□□□□□ -0.49
SMC5-201ENST00000361138 ZNF785A8K8V0 405 aa11.98□□□□□ -0.49
SMC5-201ENST00000361138 C3orf80F5H4A9 247 aa11.98□□□□□ -0.49
SMC5-201ENST00000361138 CLDN14O95500 239 aa11.98□□□□□ -0.49
SMC5-201ENST00000361138 RBPJQ06330 500 aa11.98□□□□□ -0.49
SMC5-201ENST00000361138 HIST1H2BLQ99880 126 aa11.98□□□□□ -0.49
SMC5-201ENST00000361138 CDC42EP3Q9UKI2 254 aa11.98□□□□□ -0.49
SMC5-201ENST00000361138 hADV38S2A0JD32 116 aa11.98□□□□□ -0.49
SMC5-201ENST00000361138 K7N7A8 449 aa11.98□□□□□ -0.49
SMC5-201ENST00000361138 CXCL1P09341 107 aa11.98□□□□□ -0.49
SMC5-201ENST00000361138 SEBOXQ9HB31 216 aaPredicted RBP11.98□□□□□ -0.49
SMC5-201ENST00000361138 NPBWR2P48146 333 aa11.97□□□□□ -0.49
SMC5-201ENST00000361138 SRSF4Q08170 494 aaKnown RBP11.97□□□□□ -0.49
SMC5-201ENST00000361138 C5orf17Q8NAS9 161 aa11.97□□□□□ -0.49
SMC5-201ENST00000361138 STXBP6Q8NFX7 210 aa11.97□□□□□ -0.49
SMC5-201ENST00000361138 TRBV6-7A0A0A0MS04 114 aa11.97□□□□□ -0.49
SMC5-201ENST00000361138 VSTM2AQ8TAG5 236 aa11.97□□□□□ -0.49
SMC5-201ENST00000361138 SPSB4Q96A44 273 aa11.97□□□□□ -0.49
SMC5-201ENST00000361138 FBLN5Q9UBX5 448 aa11.97□□□□□ -0.49
SMC5-201ENST00000361138 KIAA1644Q3SXP7 199 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms