RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 PXMP4Q9Y6I8 212 aa18.08■□□□□ 0.48
SMURF1-201ENST00000361125 CXorf66Q5JRM2 361 aaPredicted RBP18.08■□□□□ 0.48
SMURF1-201ENST00000361125 DPPA3Q6W0C5 159 aa18.08■□□□□ 0.48
SMURF1-201ENST00000361125 NYNRINQ9P2P1 1898 aaKnown RBP18.07■□□□□ 0.48
SMURF1-201ENST00000361125 OR2T8A6NH00 312 aa18.07■□□□□ 0.48
SMURF1-201ENST00000361125 RIPPLY2Q5TAB7 128 aa18.07■□□□□ 0.48
SMURF1-201ENST00000361125 SELENOHQ8IZQ5 122 aaKnown RBP18.07■□□□□ 0.48
SMURF1-201ENST00000361125 LCTP09848 1927 aa18.07■□□□□ 0.48
SMURF1-201ENST00000361125 OR10J1P30954 320 aa18.07■□□□□ 0.48
SMURF1-201ENST00000361125 RPL29P47914 159 aaKnown RBP18.07■□□□□ 0.48
SMURF1-201ENST00000361125 KCNMB1Q16558 191 aa18.07■□□□□ 0.48
SMURF1-201ENST00000361125 HLA-DRB5Q30154 266 aa18.07■□□□□ 0.48
SMURF1-201ENST00000361125 AQP10Q96PS8 301 aa18.07■□□□□ 0.48
SMURF1-201ENST00000361125 C5orf66Q9H5L9 145 aa18.07■□□□□ 0.48
SMURF1-201ENST00000361125 PATJQ8NI35 1801 aa18.07■□□□□ 0.48
SMURF1-201ENST00000361125 CD74P04233 296 aa18.07■□□□□ 0.48
SMURF1-201ENST00000361125 FUT9Q9Y231 359 aa18.07■□□□□ 0.48
SMURF1-201ENST00000361125 PDCD11Q14690 1871 aaKnown RBP18.07■□□□□ 0.48
SMURF1-201ENST00000361125 ODAMA1E959 279 aa18.07■□□□□ 0.48
SMURF1-201ENST00000361125 FAM87AP0C7U9 286 aa18.07■□□□□ 0.48
SMURF1-201ENST00000361125 LRRC75AQ8NAA5 344 aa18.07■□□□□ 0.48
SMURF1-201ENST00000361125 ZNF253O75346 499 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 SCGB1C2P0DMR2 95 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 SLC25A53Q5H9E4 307 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 FDX2Q6P4F2 183 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 LINC01560Q8TB33 94 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 GPR146Q96CH1 333 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 TLNRD1Q9H1K6 362 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 NPVFQ9HCQ7 196 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 ZNF137PP52743 207 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 OR2D3Q8NGH3 330 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 OR52M1Q8NGK5 317 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 SFXN3Q9BWM7 321 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 IER3P46695 156 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 Q96M66 194 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 ZNF703Q9H7S9 590 aaPredicted RBP18.06■□□□□ 0.48
SMURF1-201ENST00000361125 CHODLQ9H9P2 273 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 RNF115Q9Y4L5 304 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 GLIPR1P48060 266 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 GUCD1Q96NT3 240 aa18.06■□□□□ 0.48
SMURF1-201ENST00000361125 HYPMO75409 117 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 C1QL1O75973 258 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 FAM106CPP0CH98 169 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 CCKARP32238 428 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 RIGQ13278 110 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 C19orf35Q6ZS72 473 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 SHISA5Q8N114 240 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 CYB561D1Q8N8Q1 229 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 FAM90A10PA6NDY2 464 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 FAM90A18PA6NE21 464 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 FAM90A16PA6NEW6 464 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 FAM90A20PA6NIJ5 464 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 FAM90A8PA6NJQ4 464 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 FAM90A7PA6NKC0 464 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 FAM90A22PA8MWA6 464 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 FAM90A12PA8MX19 464 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 FAM90A5PA8MXJ8 464 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 FAM90A23PA8MXZ1 464 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 PLAUP00749 431 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 PRSS1P07477 247 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 FAM90A15PP0C7V4 464 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 FAM90A13PP0C7W8 464 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 FAM90A14PP0C7W9 464 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 FAM90A24PP0C7X0 464 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 GFRA1P56159 465 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 TMEM116Q8NCL8 245 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 HSF4Q9ULV5 492 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 TDRD6O60522 2096 aaKnown RBP18.05■□□□□ 0.48
SMURF1-201ENST00000361125 CCDC88CQ9P219 2028 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 TFPI2P48307 235 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 TMEM252Q8N6L7 170 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 SNRNP40Q96DI7 357 aaKnown RBP18.05■□□□□ 0.48
SMURF1-201ENST00000361125 RHBDL1O75783 438 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 CD40P25942 277 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 CSRP2Q16527 193 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 VWA1Q6PCB0 445 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 FGFRL1Q8N441 504 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 ANKRD36A6QL64 1941 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 IGKV1D-43A0A0B4J1Z2 117 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 C10orf128Q5T292 105 aa18.05■□□□□ 0.48
SMURF1-201ENST00000361125 MYOFQ9NZM1 2061 aa18.04■□□□□ 0.48
SMURF1-201ENST00000361125 HIST1H1EP10412 219 aaKnown RBP18.04■□□□□ 0.48
SMURF1-201ENST00000361125 HOXB1P14653 301 aaPredicted RBP18.04■□□□□ 0.48
SMURF1-201ENST00000361125 ZNF552Q9H707 407 aaPredicted RBP18.04■□□□□ 0.48
SMURF1-201ENST00000361125 RBM14Q96PK6 669 aaKnown RBP18.04■□□□□ 0.48
SMURF1-201ENST00000361125 PPIAL4CA0A0B4J2A2 164 aa18.04■□□□□ 0.48
SMURF1-201ENST00000361125 PPIAL4GP0DN37 164 aa18.04■□□□□ 0.48
SMURF1-201ENST00000361125 COX5BP10606 129 aa18.04■□□□□ 0.48
SMURF1-201ENST00000361125 STXBP6Q8NFX7 210 aa18.04■□□□□ 0.48
SMURF1-201ENST00000361125 SMDT1Q9H4I9 107 aa18.04■□□□□ 0.48
SMURF1-201ENST00000361125 CDK2AP1O14519 115 aa18.04■□□□□ 0.48
SMURF1-201ENST00000361125 GBGT1Q8N5D6 347 aa18.04■□□□□ 0.48
SMURF1-201ENST00000361125 MC5RP33032 325 aa18.03■□□□□ 0.48
SMURF1-201ENST00000361125 VKORC1L1Q8N0U8 176 aa18.03■□□□□ 0.48
SMURF1-201ENST00000361125 CBY1Q9Y3M2 126 aa18.03■□□□□ 0.48
SMURF1-201ENST00000361125 IGKV3D-11A0A0A0MRZ8 115 aa18.03■□□□□ 0.48
SMURF1-201ENST00000361125 CHRNA10Q9GZZ6 450 aa18.03■□□□□ 0.48
SMURF1-201ENST00000361125 TBX6O95947 436 aaPredicted RBP18.03■□□□□ 0.48
SMURF1-201ENST00000361125 ARF6P62330 175 aa18.03■□□□□ 0.48
SMURF1-201ENST00000361125 RPL8P62917 257 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms