RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 A0A087X0M5 115 aa18.97■□□□□ 0.63
SDF4-202ENST00000360001 SAA2-SAA4A0A096LPE2 208 aa18.97■□□□□ 0.63
SDF4-202ENST00000360001 A0A1B0GX30 115 aa18.97■□□□□ 0.63
SDF4-202ENST00000360001 IGKV1-39P01597 117 aa18.97■□□□□ 0.63
SDF4-202ENST00000360001 IGKV1D-39P04432 117 aa18.97■□□□□ 0.63
SDF4-202ENST00000360001 SAA2P0DJI9 122 aaPredicted RBP18.97■□□□□ 0.63
SDF4-202ENST00000360001 DUTP33316 252 aaKnown RBP18.97■□□□□ 0.63
SDF4-202ENST00000360001 BRWD1-AS2P59051 145 aa18.97■□□□□ 0.63
SDF4-202ENST00000360001 LAMTOR1Q6IAA8 161 aa18.97■□□□□ 0.63
SDF4-202ENST00000360001 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.97■□□□□ 0.63
SDF4-202ENST00000360001 TCTEX1D2Q8WW35 142 aa18.97■□□□□ 0.63
SDF4-202ENST00000360001 ZNF251Q9BRH9 671 aa18.97■□□□□ 0.63
SDF4-202ENST00000360001 DUXBA0A1W2PPF3 345 aa18.97■□□□□ 0.63
SDF4-202ENST00000360001 A0A1W2PPH5 198 aa18.97■□□□□ 0.63
SDF4-202ENST00000360001 RAB29O14966 203 aa18.97■□□□□ 0.63
SDF4-202ENST00000360001 LRRC37A5PQ49AS3 106 aa18.97■□□□□ 0.63
SDF4-202ENST00000360001 LYG1Q8N1E2 194 aa18.97■□□□□ 0.63
SDF4-202ENST00000360001 BARX1Q9HBU1 254 aaPredicted RBP18.97■□□□□ 0.63
SDF4-202ENST00000360001 SESN1Q9Y6P5 492 aa18.97■□□□□ 0.63
SDF4-202ENST00000360001 LOC105371242A0A075B767 164 aa18.96■□□□□ 0.63
SDF4-202ENST00000360001 M0R1X1 148 aa18.96■□□□□ 0.63
SDF4-202ENST00000360001 RBP4P02753 201 aa18.96■□□□□ 0.63
SDF4-202ENST00000360001 LIPFP07098 398 aa18.96■□□□□ 0.63
SDF4-202ENST00000360001 FGL1Q08830 312 aa18.96■□□□□ 0.63
SDF4-202ENST00000360001 ZNF787Q6DD87 383 aa18.96■□□□□ 0.63
SDF4-202ENST00000360001 C9orf62Q8N4C0 152 aa18.96■□□□□ 0.63
SDF4-202ENST00000360001 COMMD9Q9P000 198 aa18.96■□□□□ 0.63
SDF4-202ENST00000360001 GSKIPQ9P0R6 139 aa18.96■□□□□ 0.63
SDF4-202ENST00000360001 BOLA1Q9Y3E2 137 aa18.96■□□□□ 0.63
SDF4-202ENST00000360001 ARHGAP32A7KAX9 2087 aa18.96■□□□□ 0.63
SDF4-202ENST00000360001 KIAA1324LA8MWY0 1029 aaPredicted RBP18.95■□□□□ 0.62
SDF4-202ENST00000360001 RAMP3O60896 148 aa18.95■□□□□ 0.62
SDF4-202ENST00000360001 PAX1P15863 534 aa18.95■□□□□ 0.62
SDF4-202ENST00000360001 LMO4P61968 165 aa18.95■□□□□ 0.62
SDF4-202ENST00000360001 NMSQ5H8A3 153 aa18.95■□□□□ 0.62
SDF4-202ENST00000360001 OR2B11Q5JQS5 317 aa18.95■□□□□ 0.62
SDF4-202ENST00000360001 C8orf31Q8N9H6 132 aa18.95■□□□□ 0.62
SDF4-202ENST00000360001 DRAXINQ8NBI3 349 aaPredicted RBP18.95■□□□□ 0.62
SDF4-202ENST00000360001 CLDND2Q8NHS1 167 aa18.95■□□□□ 0.62
SDF4-202ENST00000360001 ZNF596Q8TC21 504 aa18.95■□□□□ 0.62
SDF4-202ENST00000360001 DOPEY2Q9Y3R5 2298 aa18.95■□□□□ 0.62
SDF4-202ENST00000360001 VDAC1P21796 283 aa18.95■□□□□ 0.62
SDF4-202ENST00000360001 NCR3LG1Q68D85 454 aa18.95■□□□□ 0.62
SDF4-202ENST00000360001 TCTEX1D1Q8N7M0 179 aa18.95■□□□□ 0.62
SDF4-202ENST00000360001 ZBTB8BQ8NAP8 495 aaPredicted RBP18.95■□□□□ 0.62
SDF4-202ENST00000360001 FAM168AQ92567 244 aa18.95■□□□□ 0.62
SDF4-202ENST00000360001 TMEM133Q9H2Q1 129 aa18.95■□□□□ 0.62
SDF4-202ENST00000360001 MPC2O95563 127 aa18.94■□□□□ 0.62
SDF4-202ENST00000360001 ZFP36P26651 326 aaKnown RBP18.94■□□□□ 0.62
SDF4-202ENST00000360001 PSMB6P28072 239 aa18.94■□□□□ 0.62
SDF4-202ENST00000360001 SPAG16Q8N0X2 631 aa18.94■□□□□ 0.62
SDF4-202ENST00000360001 LINC00311Q8N616 119 aa18.94■□□□□ 0.62
SDF4-202ENST00000360001 C10orf105Q8TEF2 133 aa18.94■□□□□ 0.62
SDF4-202ENST00000360001 PERPQ96FX8 193 aa18.94■□□□□ 0.62
SDF4-202ENST00000360001 PLSCR3Q9NRY6 295 aa18.94■□□□□ 0.62
SDF4-202ENST00000360001 FAM212BQ9NTI7 297 aaPredicted RBP18.94■□□□□ 0.62
SDF4-202ENST00000360001 J3QR06 171 aa18.93■□□□□ 0.62
SDF4-202ENST00000360001 LPAR6P43657 344 aa18.93■□□□□ 0.62
SDF4-202ENST00000360001 KRTAP10-9P60411 292 aa18.93■□□□□ 0.62
SDF4-202ENST00000360001 FAM219AQ8IW50 185 aa18.93■□□□□ 0.62
SDF4-202ENST00000360001 PSMG3-AS1Q96PY0 264 aa18.93■□□□□ 0.62
SDF4-202ENST00000360001 PIMREGQ9BSJ6 248 aa18.93■□□□□ 0.62
SDF4-202ENST00000360001 PTPN13Q12923 2485 aa18.93■□□□□ 0.62
SDF4-202ENST00000360001 FXYD6-FXYD2A0A087WZ82 144 aa18.93■□□□□ 0.62
SDF4-202ENST00000360001 PIGBOS1A0A0B4J2F0 54 aa18.93■□□□□ 0.62
SDF4-202ENST00000360001 RPA2P15927 270 aa18.93■□□□□ 0.62
SDF4-202ENST00000360001 DLX1P56177 255 aa18.93■□□□□ 0.62
SDF4-202ENST00000360001 C11orf87Q6NUJ2 197 aa18.93■□□□□ 0.62
SDF4-202ENST00000360001 GSX2Q9BZM3 304 aa18.93■□□□□ 0.62
SDF4-202ENST00000360001 ONECUT1Q9UBC0 465 aa18.93■□□□□ 0.62
SDF4-202ENST00000360001 NDUFS8O00217 210 aa18.92■□□□□ 0.62
SDF4-202ENST00000360001 SLC25A4P12235 298 aa18.92■□□□□ 0.62
SDF4-202ENST00000360001 RAB32Q13637 225 aa18.92■□□□□ 0.62
SDF4-202ENST00000360001 CLEC2AQ6UVW9 174 aa18.92■□□□□ 0.62
SDF4-202ENST00000360001 ABHD12Q8N2K0 398 aa18.92■□□□□ 0.62
SDF4-202ENST00000360001 Q8N7P7 452 aa18.92■□□□□ 0.62
SDF4-202ENST00000360001 OR9G1Q8NH87 305 aa18.92■□□□□ 0.62
SDF4-202ENST00000360001 HSPB11Q9Y547 144 aa18.92■□□□□ 0.62
SDF4-202ENST00000360001 A0A0G2JRQ6 117 aa18.92■□□□□ 0.62
SDF4-202ENST00000360001 HMSDA8MTL9 139 aa18.92■□□□□ 0.62
SDF4-202ENST00000360001 VWC2LB2RUY7 222 aa18.92■□□□□ 0.62
SDF4-202ENST00000360001 IGKV1-5P01602 117 aa18.92■□□□□ 0.62
SDF4-202ENST00000360001 SSTR2P30874 369 aa18.92■□□□□ 0.62
SDF4-202ENST00000360001 ZNF816Q0VGE8 651 aaPredicted RBP18.92■□□□□ 0.62
SDF4-202ENST00000360001 LGALSLQ3ZCW2 172 aaPredicted RBP18.92■□□□□ 0.62
SDF4-202ENST00000360001 DDB2Q92466 427 aa18.92■□□□□ 0.62
SDF4-202ENST00000360001 S1PR3Q99500 378 aa18.92■□□□□ 0.62
SDF4-202ENST00000360001 H0YIZ8 118 aa18.91■□□□□ 0.62
SDF4-202ENST00000360001 ZNF833PQ6ZTB9 187 aa18.91■□□□□ 0.62
SDF4-202ENST00000360001 RNF126Q9BV68 326 aa18.91■□□□□ 0.62
SDF4-202ENST00000360001 hCG_1809904A0A1W2PP81 198 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 A0A1W2PPE2 198 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 A0A1W2PR64 198 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 A0A1W2PRV1 198 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 A8MXK9 166 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 S1PR2O95136 353 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 ARF6P62330 175 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 OR4D5Q8NGN0 318 aa18.9■□□□□ 0.62
SDF4-202ENST00000360001 LSM10Q969L4 123 aaKnown RBP18.9■□□□□ 0.62
SDF4-202ENST00000360001 MBD2Q9UBB5 411 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms