RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 C21orf62-AS1Q17RA5 79 aa10.22□□□□□ -0.77
SMARCAL1-201ENST00000357276 Q8N976 141 aa10.22□□□□□ -0.77
SMARCAL1-201ENST00000357276 ZNF114Q8NC26 417 aa10.22□□□□□ -0.77
SMARCAL1-201ENST00000357276 CPEB3Q8NE35 698 aaKnown RBP10.22□□□□□ -0.77
SMARCAL1-201ENST00000357276 NPCDR1Q9BY65 106 aa10.22□□□□□ -0.77
SMARCAL1-201ENST00000357276 LIN7CQ9NUP9 197 aaKnown RBP10.22□□□□□ -0.77
SMARCAL1-201ENST00000357276 OR1A1Q9P1Q5 309 aa10.22□□□□□ -0.77
SMARCAL1-201ENST00000357276 HSPB6O14558 160 aa10.21□□□□□ -0.77
SMARCAL1-201ENST00000357276 RBFOX2O43251 390 aaKnown RBP eCLIP10.21□□□□□ -0.77
SMARCAL1-201ENST00000357276 SS18L1O75177 396 aaPredicted RBP10.21□□□□□ -0.77
SMARCAL1-201ENST00000357276 CDKN1AP38936 164 aa10.21□□□□□ -0.77
SMARCAL1-201ENST00000357276 CTRLP40313 264 aa10.21□□□□□ -0.77
SMARCAL1-201ENST00000357276 RAC3P60763 192 aa10.21□□□□□ -0.77
SMARCAL1-201ENST00000357276 FFAR4Q5NUL3 377 aa10.21□□□□□ -0.77
SMARCAL1-201ENST00000357276 DMRTA1Q5VZB9 504 aa10.21□□□□□ -0.77
SMARCAL1-201ENST00000357276 SFRP2Q96HF1 295 aa10.21□□□□□ -0.77
SMARCAL1-201ENST00000357276 ALKBH3Q96Q83 286 aaPredicted RBP10.21□□□□□ -0.77
SMARCAL1-201ENST00000357276 DEFB126Q9BYW3 111 aa10.21□□□□□ -0.77
SMARCAL1-201ENST00000357276 MSL2Q9HCI7 577 aa10.21□□□□□ -0.77
SMARCAL1-201ENST00000357276 TRAV9-1A0A075B6T8 112 aa10.21□□□□□ -0.78
SMARCAL1-201ENST00000357276 C1QTNF9P0C862 333 aa10.21□□□□□ -0.78
SMARCAL1-201ENST00000357276 GPM6AP51674 278 aa10.21□□□□□ -0.78
SMARCAL1-201ENST00000357276 RAET1LQ5VY80 246 aa10.21□□□□□ -0.78
SMARCAL1-201ENST00000357276 CST9LP1Q5W188 147 aa10.21□□□□□ -0.78
SMARCAL1-201ENST00000357276 OR8G2PQ6IF36 304 aa10.21□□□□□ -0.78
SMARCAL1-201ENST00000357276 FAM180AQ6UWF9 173 aa10.21□□□□□ -0.78
SMARCAL1-201ENST00000357276 TCF23Q7RTU1 214 aa10.21□□□□□ -0.78
SMARCAL1-201ENST00000357276 OR56B2PQ8NGI1 322 aa10.21□□□□□ -0.78
SMARCAL1-201ENST00000357276 OR1L1Q8NH94 360 aa10.21□□□□□ -0.78
SMARCAL1-201ENST00000357276 RAB1CQ92928 201 aa10.21□□□□□ -0.78
SMARCAL1-201ENST00000357276 KCNIP2Q9NS61 270 aa10.21□□□□□ -0.78
SMARCAL1-201ENST00000357276 TRBV20OR9-2A0A075B6H5 130 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 CD82P27701 267 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 B3GALT5-AS1P59052 145 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 MKXQ8IYA7 352 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 FGFRL1Q8N441 504 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 SGMS2Q8NHU3 365 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 ASCL3Q9NQ33 180 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 TFF3Q07654 80 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 Q0VG73 95 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 COL5A1-AS1Q5SY13 56 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 DEFB123Q8N688 67 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 DEFB119Q8N690 84 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 DERL1Q9BUN8 251 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 PRDM6Q9NQX0 595 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 GON4LQ3T8J9 2241 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 TRAPPC2LH3BP13 241 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 CCL3P10147 92 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 CEACAM16Q2WEN9 425 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 NRN1LQ496H8 165 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 NEK7Q8TDX7 302 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 RDH5Q92781 318 aa10.2□□□□□ -0.78
SMARCAL1-201ENST00000357276 GRIFINA4D1Z8 144 aa10.19□□□□□ -0.78
SMARCAL1-201ENST00000357276 F6UZH7 168 aa10.19□□□□□ -0.78
SMARCAL1-201ENST00000357276 SYNGR1O43759 233 aa10.19□□□□□ -0.78
SMARCAL1-201ENST00000357276 MMP23AO75900 390 aa10.19□□□□□ -0.78
SMARCAL1-201ENST00000357276 CYC1P08574 325 aa10.19□□□□□ -0.78
SMARCAL1-201ENST00000357276 OR5A2Q8NGI9 324 aa10.19□□□□□ -0.78
SMARCAL1-201ENST00000357276 VAMP8Q9BV40 100 aa10.19□□□□□ -0.78
SMARCAL1-201ENST00000357276 SERF1AO75920 110 aa10.19□□□□□ -0.78
SMARCAL1-201ENST00000357276 SYNGR4O95473 234 aa10.19□□□□□ -0.78
SMARCAL1-201ENST00000357276 CLDN1O95832 211 aa10.19□□□□□ -0.78
SMARCAL1-201ENST00000357276 OR5I1Q13606 314 aa10.19□□□□□ -0.78
SMARCAL1-201ENST00000357276 PCOLCEQ15113 449 aa10.19□□□□□ -0.78
SMARCAL1-201ENST00000357276 GGNQ86UU5 652 aa10.19□□□□□ -0.78
SMARCAL1-201ENST00000357276 PPP1R3CQ9UQK1 317 aa10.19□□□□□ -0.78
SMARCAL1-201ENST00000357276 PAM16Q9Y3D7 125 aa10.19□□□□□ -0.78
SMARCAL1-201ENST00000357276 NCKAP5O14513 1909 aa10.19□□□□□ -0.78
SMARCAL1-201ENST00000357276 KRASP01116 189 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 TIMP3P35625 211 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 ATP5G3P48201 142 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 GTF3C1Q12789 2109 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 EIF4EBP1Q13541 118 aaPredicted RBP10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 PSMF1Q92530 271 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 GMPPAQ96IJ6 420 aaPredicted RBP10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 HSPB9Q9BQS6 159 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 DLL3Q9NYJ7 618 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 C19orf25Q9UFG5 118 aaPredicted RBP10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 LOC102723996A0A087X1L8 192 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 GJE1A6NN92 205 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 CBR3O75828 277 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 NDUFB4O95168 129 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 MYF5P13349 255 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 MSMO1Q15800 293 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 AAED1Q7RTV5 226 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 TXNDC17Q9BRA2 123 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 ZDHHC11Q9H8X9 412 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 RYDENQ9NUL5 291 aaKnown RBP10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 SLC45A2Q9UMX9 530 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 RNF114Q9Y508 228 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 SIAH2O43255 324 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 SCRG1O75711 98 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 NDUFB8O95169 186 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 EGR1P18146 543 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 CDC34P49427 236 aaPredicted RBP10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 RAB7AP51149 207 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 MRPL14Q6P1L8 145 aaKnown RBP10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 SLC25A45Q8N413 288 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 DRAM1Q8N682 238 aa10.18□□□□□ -0.78
SMARCAL1-201ENST00000357276 OR5T1Q8NG75 326 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms