RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 SEC22AQ96IW7 307 aa14.85□□□□□ -0.03
SMARCD3-202ENST00000356800 ZNRD1Q9P1U0 126 aa14.85□□□□□ -0.03
SMARCD3-202ENST00000356800 MAP1AP78559 2803 aaPredicted RBP14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 PIGBOS1A0A0B4J2F0 54 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 C13orf42A0A1B0GVH6 325 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 IFNA21P01568 189 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 HOXB5P09067 269 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 LCN2P80188 198 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 CLEC12BQ2HXU8 276 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 C1orf229Q6ZS94 237 aaPredicted RBP14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 SLC25A48Q6ZT89 311 aaKnown RBP14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 Q8N7P7 452 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 LHFPL5Q8TAF8 219 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 IL22RA2Q969J5 263 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 RAB39BQ96DA2 213 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 SDHAF2Q9NX18 166 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 A0A087X0M5 115 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 A0A1B0GX30 115 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 A0A1W2PPH5 198 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 RNF212BA8MTL3 300 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 MPTX1A8MV57 137 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 FAM157AC9JC47 383 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 RBP4P02753 201 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 RAB7AP51149 207 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 ODF3L1Q8IXM7 274 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 C2orf50Q96LR7 162 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 LIN7CQ9NUP9 197 aaKnown RBP14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 ONECUT1Q9UBC0 465 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 TMED3Q9Y3Q3 217 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 SESN1Q9Y6P5 492 aa14.84□□□□□ -0.03
SMARCD3-202ENST00000356800 NAV2Q8IVL1 2488 aa14.83□□□□□ -0.03
SMARCD3-202ENST00000356800 DUXBA0A1W2PPF3 345 aa14.83□□□□□ -0.04
SMARCD3-202ENST00000356800 SNAPC5O75971 98 aa14.83□□□□□ -0.04
SMARCD3-202ENST00000356800 GPR12P47775 334 aa14.83□□□□□ -0.04
SMARCD3-202ENST00000356800 PRB3Q04118 309 aaPredicted RBP14.83□□□□□ -0.04
SMARCD3-202ENST00000356800 Q3ZCU0 254 aa14.83□□□□□ -0.04
SMARCD3-202ENST00000356800 GGNBP1Q5YKI7 109 aa14.83□□□□□ -0.04
SMARCD3-202ENST00000356800 BTNL3Q6UXE8 466 aa14.83□□□□□ -0.04
SMARCD3-202ENST00000356800 LYZL2Q7Z4W2 148 aa14.83□□□□□ -0.04
SMARCD3-202ENST00000356800 OR51H1Q8NH63 302 aa14.83□□□□□ -0.04
SMARCD3-202ENST00000356800 PPP1R1CQ8WVI7 109 aa14.83□□□□□ -0.04
SMARCD3-202ENST00000356800 OR10C1Q96KK4 312 aa14.83□□□□□ -0.04
SMARCD3-202ENST00000356800 TMEM133Q9H2Q1 129 aa14.83□□□□□ -0.04
SMARCD3-202ENST00000356800 GAB2Q9UQC2 676 aa14.83□□□□□ -0.04
SMARCD3-202ENST00000356800 WNK2Q9Y3S1 2297 aa14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 ARF6P62330 175 aa14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 RPL30P62888 115 aaKnown RBP14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 IL15RAQ13261 267 aa14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 RPL39P5Q59GN2 51 aa14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 TMEM268Q5VZI3 342 aa14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 LAMTOR1Q6IAA8 161 aa14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 ZNF66Q6ZN08 573 aa14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 ZNF695Q8IW36 515 aa14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 SELENOHQ8IZQ5 122 aaKnown RBP14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 LRRC75A-AS1Q8N1F1 130 aa14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 C9orf62Q8N4C0 152 aa14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 SLC35G3Q8N808 338 aa14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 ZNF596Q8TC21 504 aa14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 MBD6Q96DN6 1003 aa14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 MMP26Q9NRE1 261 aa14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 COMMD9Q9P000 198 aa14.82□□□□□ -0.04
SMARCD3-202ENST00000356800 TRAV14DV4A0A0A6YYC5 116 aa14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 HMSDA8MTL9 139 aa14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 LINC00205P59089 165 aa14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 RBPMSQ93062 196 aaKnown RBP14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 HSD17B10Q99714 261 aaKnown RBP14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 ZNF251Q9BRH9 671 aa14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 FAM212BQ9NTI7 297 aaPredicted RBP14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 SAA2-SAA4A0A096LPE2 208 aa14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 IGHV2-70DA0A0C4DH43 119 aa14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 J3QR06 171 aa14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 M0R1W7 72 aa14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 ENSAO43768 121 aaKnown RBP14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 SERPINE2P07093 398 aa14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 SAA2P0DJI9 122 aaPredicted RBP14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 IAH1Q2TAA2 248 aaPredicted RBP14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 LYG1Q8N1E2 194 aa14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 ABHD12Q8N2K0 398 aa14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 TCTEX1D1Q8N7M0 179 aa14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 C8orf31Q8N9H6 132 aa14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 POLR3KQ9Y2Y1 108 aaPredicted RBP14.81□□□□□ -0.04
SMARCD3-202ENST00000356800 UNC79Q9P2D8 2635 aa14.8□□□□□ -0.04
SMARCD3-202ENST00000356800 A0A096LNT2 108 aa14.8□□□□□ -0.04
SMARCD3-202ENST00000356800 LINC00473A8K010 186 aa14.8□□□□□ -0.04
SMARCD3-202ENST00000356800 FOXH1O75593 365 aa14.8□□□□□ -0.04
SMARCD3-202ENST00000356800 SLC25A4P12235 298 aa14.8□□□□□ -0.04
SMARCD3-202ENST00000356800 SLC25A16P16260 332 aa14.8□□□□□ -0.04
SMARCD3-202ENST00000356800 VDAC1P21796 283 aa14.8□□□□□ -0.04
SMARCD3-202ENST00000356800 PSMB6P28072 239 aa14.8□□□□□ -0.04
SMARCD3-202ENST00000356800 CATR1Q13166 79 aa14.8□□□□□ -0.04
SMARCD3-202ENST00000356800 LINC00311Q8N616 119 aa14.8□□□□□ -0.04
SMARCD3-202ENST00000356800 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.8□□□□□ -0.04
SMARCD3-202ENST00000356800 GRPEL2Q8TAA5 225 aa14.8□□□□□ -0.04
SMARCD3-202ENST00000356800 PDZD2O15018 2839 aa14.79□□□□□ -0.04
SMARCD3-202ENST00000356800 IGHV2-26A0A0B4J1V2 119 aa14.79□□□□□ -0.04
SMARCD3-202ENST00000356800 RAB29O14966 203 aa14.79□□□□□ -0.04
SMARCD3-202ENST00000356800 MPC2O95563 127 aa14.79□□□□□ -0.04
SMARCD3-202ENST00000356800 RPA2P15927 270 aa14.79□□□□□ -0.04
SMARCD3-202ENST00000356800 ZNF16P17020 682 aaPredicted RBP14.79□□□□□ -0.04
SMARCD3-202ENST00000356800 BRWD1-AS2P59051 145 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms