RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 DOLPP1Q86YN1 238 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 NDUFA2O43678 99 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 ERVFRD-1P60508 538 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 RANP62826 216 aaKnown RBP10.55□□□□□ -0.72
COLCA1-201ENST00000355430 RPEL1Q2QD12 228 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 OR2J1Q9GZK6 312 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 DOK5Q9P104 306 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 GNG4P50150 75 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 SUCLG1P53597 346 aaKnown RBP10.55□□□□□ -0.72
COLCA1-201ENST00000355430 ADTRPQ96IZ2 230 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 WNT5BQ9H1J7 359 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 NPIPB7O75200 414 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 PGA5P0DJD9 388 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 MPZP25189 248 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 CCKARP32238 428 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 RTN4RL2Q86UN3 420 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 MUC15Q8N387 334 aa10.55□□□□□ -0.72
COLCA1-201ENST00000355430 RNASE6Q93091 150 aaKnown RBP10.55□□□□□ -0.72
COLCA1-201ENST00000355430 BSCL2Q96G97 398 aaPredicted RBP10.55□□□□□ -0.72
COLCA1-201ENST00000355430 ABCA7Q8IZY2 2146 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 CLPSP04118 112 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 LGALS7P47929 136 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 LRP11Q86VZ4 500 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 SSMEM1Q8WWF3 244 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 GRAMD2BQ96HH9 432 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 GGACTQ9BVM4 153 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 GPR61Q9BZJ8 451 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 CDX1P47902 265 aaPredicted RBP10.54□□□□□ -0.72
COLCA1-201ENST00000355430 RHOBP62745 196 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 AESQ08117 197 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 WDR25Q64LD2 544 aaPredicted RBP10.54□□□□□ -0.72
COLCA1-201ENST00000355430 SLC24A4Q8NFF2 622 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 OR10S1Q8NGN2 331 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 ABHD14BQ96IU4 210 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 ZNF319Q9P2F9 582 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 SLC25A10Q9UBX3 287 aaPredicted RBP10.54□□□□□ -0.72
COLCA1-201ENST00000355430 IGKV1-9A0A0C4DH69 117 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 UCP3P55916 312 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 PLAURQ03405 335 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 Q56UQ5 140 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 PLXNA4Q9HCM2 1894 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 TMEM11P17152 192 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 CNN1P51911 297 aaKnown RBP10.54□□□□□ -0.72
COLCA1-201ENST00000355430 BPIFB3P59826 476 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 SERF2P84101 59 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 OR10G8Q8NGN5 311 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 TMEM204Q9BSN7 226 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 GSN-AS1Q9NRJ2 163 aa10.54□□□□□ -0.72
COLCA1-201ENST00000355430 AHCTF1Q8WYP5 2266 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 E9PLN8 166 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 LDLRAD4O15165 306 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 VKORC1Q9BQB6 163 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 TPRP12270 2363 aaKnown RBP10.53□□□□□ -0.72
COLCA1-201ENST00000355430 SYNGR3O43761 229 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 GZMHP20718 246 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 APOBEC3AP31941 199 aaPredicted RBP10.53□□□□□ -0.72
COLCA1-201ENST00000355430 LYZL4Q96KX0 146 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 IMMP1LQ96LU5 166 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 FKBP11Q9NYL4 201 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 OR1A1Q9P1Q5 309 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 ARL2-SNX15V9GYD0 113 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 MDC1Q14676 2089 aaKnown RBP10.53□□□□□ -0.72
COLCA1-201ENST00000355430 TMEM183BQ1AE95 376 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 FAM166AQ6J272 317 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 PRSS33Q8NF86 280 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 MARS2Q96GW9 593 aaKnown RBP10.53□□□□□ -0.72
COLCA1-201ENST00000355430 MESP1Q9BRJ9 268 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 MRPL13Q9BYD1 178 aaKnown RBP10.53□□□□□ -0.72
COLCA1-201ENST00000355430 CYTL1Q9NRR1 136 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 CHEK1O14757 476 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 TIMM23BQ5SRD1 257 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 RBKSQ9H477 322 aa10.53□□□□□ -0.72
COLCA1-201ENST00000355430 SRCAPQ6ZRS2 3230 aa10.52□□□□□ -0.72
COLCA1-201ENST00000355430 FOXH1O75593 365 aa10.52□□□□□ -0.72
COLCA1-201ENST00000355430 GLIPR1P48060 266 aa10.52□□□□□ -0.72
COLCA1-201ENST00000355430 KCNMB1Q16558 191 aa10.52□□□□□ -0.72
COLCA1-201ENST00000355430 Q6ZT83 130 aa10.52□□□□□ -0.72
COLCA1-201ENST00000355430 OR52L2PQ8NGH6 319 aa10.52□□□□□ -0.72
COLCA1-201ENST00000355430 ZNF552Q9H707 407 aaPredicted RBP10.52□□□□□ -0.72
COLCA1-201ENST00000355430 FBLN5Q9UBX5 448 aa10.52□□□□□ -0.72
COLCA1-201ENST00000355430 FAM90A10PA6NDY2 464 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 FAM90A18PA6NE21 464 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 FAM90A16PA6NEW6 464 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 FAM90A20PA6NIJ5 464 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 FAM90A8PA6NJQ4 464 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 FAM90A7PA6NKC0 464 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 FAM90A22PA8MWA6 464 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 FAM90A12PA8MX19 464 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 FAM90A5PA8MXJ8 464 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 FAM90A23PA8MXZ1 464 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 UMODP07911 640 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 FAM90A15PP0C7V4 464 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 FAM90A13PP0C7W8 464 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 FAM90A14PP0C7W9 464 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 FAM90A24PP0C7X0 464 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 TRGC1P0CF51 173 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 CRISP2P16562 243 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 VSTM2AQ8TAG5 236 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 PERPQ96FX8 193 aa10.52□□□□□ -0.73
COLCA1-201ENST00000355430 SH2D2AQ9NP31 389 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms