RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 NIT2Q9NQR4 276 aa11.77□□□□□ -0.52
PGBD2-202ENST00000355360 PTPRZ1P23471 2315 aaPredicted RBP11.77□□□□□ -0.52
PGBD2-202ENST00000355360 TNCP24821 2201 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 LOC102723971A0A1B0GUV8 181 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 ODAMA1E959 279 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 UBE2CO00762 179 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 CLN5O75503 358 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 DFFBO76075 338 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 MMP9P14780 707 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 PAX6P26367 422 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 COL10A1Q03692 680 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 SLC38A11Q08AI6 406 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 ELOBQ15370 118 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 RNF212Q495C1 297 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 C4orf17Q53FE4 359 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 WDR31Q8NA23 367 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 GALMQ96C23 342 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 NIPSNAP3BQ9BS92 247 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 DSCAMO60469 2012 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 IQCF6A8MYZ5 107 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 IFNA4P05014 189 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 CEACAM1P13688 526 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 RAC2P15153 192 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 TFF3Q07654 80 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 MSMPQ1L6U9 139 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 Q3ZCU0 254 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 FAM201AQ5SY85 155 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 FAM90A2PQ658T7 463 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 WDR82Q6UXN9 313 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 VKORC1L1Q8N0U8 176 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 TUBA4BQ9H853 241 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 TREM2Q9NZC2 230 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 DUSP13Q9UII6 198 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 PSG11Q9UQ72 335 aa11.77□□□□□ -0.53
PGBD2-202ENST00000355360 PTPRBP23467 1997 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 CYB5BO43169 146 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 CD200P41217 278 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 NDUFA6P56556 154 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 KIAA0141Q14154 515 aaPredicted RBP11.76□□□□□ -0.53
PGBD2-202ENST00000355360 CDPF1Q6NVV7 123 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 ACSM6Q6P461 480 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 RPRMLQ8N4K4 120 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 RPP25LQ8N5L8 163 aaKnown RBP11.76□□□□□ -0.53
PGBD2-202ENST00000355360 ZNF610Q8N9Z0 462 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 IFT22Q9H7X7 185 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 KCNIP1Q9NZI2 227 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 WIPI2Q9Y4P8 454 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 A0A1B0GW64 132 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 IGHV2-5P01817 119 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 MDH2P40926 338 aaKnown RBP11.76□□□□□ -0.53
PGBD2-202ENST00000355360 TNFRSF9Q07011 255 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 GFI1BQ5VTD9 330 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 VHLLQ6RSH7 139 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 Q6ZT83 130 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 LEAP2Q969E1 77 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 LSM10Q969L4 123 aaKnown RBP11.76□□□□□ -0.53
PGBD2-202ENST00000355360 TVP23CQ96ET8 276 aa11.76□□□□□ -0.53
PGBD2-202ENST00000355360 TMEM30CPA0ZSE6 113 aa11.75□□□□□ -0.53
PGBD2-202ENST00000355360 LINC00587B1AMM8 73 aa11.75□□□□□ -0.53
PGBD2-202ENST00000355360 HSPB1P04792 205 aaKnown RBP11.75□□□□□ -0.53
PGBD2-202ENST00000355360 EGR1P18146 543 aa11.75□□□□□ -0.53
PGBD2-202ENST00000355360 SPNS3Q6ZMD2 512 aa11.75□□□□□ -0.53
PGBD2-202ENST00000355360 WDR61Q9GZS3 305 aaKnown RBP11.75□□□□□ -0.53
PGBD2-202ENST00000355360 MAP1LC3B2A6NCE7 125 aa11.75□□□□□ -0.53
PGBD2-202ENST00000355360 NPIPB11E5RHQ5 1161 aa11.75□□□□□ -0.53
PGBD2-202ENST00000355360 SELLP14151 372 aa11.75□□□□□ -0.53
PGBD2-202ENST00000355360 HOXC12P31275 282 aa11.75□□□□□ -0.53
PGBD2-202ENST00000355360 LRRC75BQ2VPJ9 315 aa11.75□□□□□ -0.53
PGBD2-202ENST00000355360 ACP7Q6ZNF0 438 aa11.75□□□□□ -0.53
PGBD2-202ENST00000355360 ZNF645Q8N7E2 425 aa11.75□□□□□ -0.53
PGBD2-202ENST00000355360 NECAP1Q8NC96 275 aa11.75□□□□□ -0.53
PGBD2-202ENST00000355360 OR8G5Q8NG78 346 aa11.75□□□□□ -0.53
PGBD2-202ENST00000355360 MAP1LC3BQ9GZQ8 125 aa11.75□□□□□ -0.53
PGBD2-202ENST00000355360 CSMD1Q96PZ7 3565 aa11.75□□□□□ -0.53
PGBD2-202ENST00000355360 TRGC2P03986 189 aa11.74□□□□□ -0.53
PGBD2-202ENST00000355360 BCL2P10415 239 aa11.74□□□□□ -0.53
PGBD2-202ENST00000355360 MOB1BQ7L9L4 216 aa11.74□□□□□ -0.53
PGBD2-202ENST00000355360 Q8IYB0 196 aa11.74□□□□□ -0.53
PGBD2-202ENST00000355360 CD177Q8N6Q3 437 aa11.74□□□□□ -0.53
PGBD2-202ENST00000355360 OR2Z1Q8NG97 314 aa11.74□□□□□ -0.53
PGBD2-202ENST00000355360 TAF15Q92804 592 aaKnown RBP eCLIP11.74□□□□□ -0.53
PGBD2-202ENST00000355360 ZGRF1Q86YA3 2104 aa11.74□□□□□ -0.53
PGBD2-202ENST00000355360 IFITM10A6NMD0 228 aa11.74□□□□□ -0.53
PGBD2-202ENST00000355360 DEFB109BQ30KR1 87 aa11.74□□□□□ -0.53
PGBD2-202ENST00000355360 NINJ1Q92982 152 aa11.74□□□□□ -0.53
PGBD2-202ENST00000355360 TRBV23-1A0A0A0MS06 115 aa11.73□□□□□ -0.53
PGBD2-202ENST00000355360 BTBD17A6NE02 478 aa11.73□□□□□ -0.53
PGBD2-202ENST00000355360 GALR2O43603 387 aaPredicted RBP11.73□□□□□ -0.53
PGBD2-202ENST00000355360 SOX15O60248 233 aa11.73□□□□□ -0.53
PGBD2-202ENST00000355360 GCSAMLQ5JQS6 135 aa11.73□□□□□ -0.53
PGBD2-202ENST00000355360 WDR25Q64LD2 544 aaPredicted RBP11.73□□□□□ -0.53
PGBD2-202ENST00000355360 OR5T1Q8NG75 326 aa11.73□□□□□ -0.53
PGBD2-202ENST00000355360 CA5BP1Q8WTZ4 195 aa11.73□□□□□ -0.53
PGBD2-202ENST00000355360 LRRC29Q8WV35 223 aa11.73□□□□□ -0.53
PGBD2-202ENST00000355360 RPUSD4Q96CM3 377 aaKnown RBP11.73□□□□□ -0.53
PGBD2-202ENST00000355360 AP4M1O00189 453 aa11.73□□□□□ -0.53
PGBD2-202ENST00000355360 HBE1P02100 147 aa11.73□□□□□ -0.53
PGBD2-202ENST00000355360 HBG1P69891 147 aa11.73□□□□□ -0.53
PGBD2-202ENST00000355360 HBG2P69892 147 aa11.73□□□□□ -0.53
PGBD2-202ENST00000355360 KHDC3LQ587J8 217 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms