RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 FRG2CA6NGY1 282 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 CRYM-AS1A6NIL9 109 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 C16orf97H3BN30 126 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 H3BQ15 152 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 YPEL1O60688 119 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 SERPINA3P01011 423 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 G6PCP35575 357 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 RAG2P55895 527 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 UBE2G2P60604 165 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 CSNK2A1P68400 391 aaPredicted RBP4.56□□□□□ -1.68
CD47-201ENST00000355354 ARFRP1Q13795 201 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 TOMM20Q15388 145 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 GUK1Q16774 197 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 PRIMA1Q86XR5 153 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 FADS6Q8N9I5 356 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 PLPP5Q8NEB5 264 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 CSNK2A3Q8NEV1 391 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 RNASE8Q8TDE3 154 aaKnown RBP4.56□□□□□ -1.68
CD47-201ENST00000355354 YPEL2Q96QA6 119 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 DIRC2Q96SL1 478 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 TM2D1Q9BX74 207 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 PARD6GQ9BYG4 376 aaPredicted RBP4.56□□□□□ -1.68
CD47-201ENST00000355354 FNDC4Q9H6D8 234 aaPredicted RBP4.56□□□□□ -1.68
CD47-201ENST00000355354 TMEM212A6NML5 194 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 SNTNA6NMZ2 147 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 SNRPGP15A8MWD9 76 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 SULT1B1O43704 296 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 HOXC12P31275 282 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 ID3Q02535 119 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 EIF2S3LQ2VIR3 472 aaKnown RBP4.56□□□□□ -1.68
CD47-201ENST00000355354 C5orf46Q6UWT4 87 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 COLCA1Q6ZS62 124 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 Q6ZWC4 215 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 OR9K2Q8NGE7 335 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 NINJ1Q92982 152 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 PPP1R3CQ9UQK1 317 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 IGHV3-72A0A0B4J1Y9 119 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 SNAI2O43623 268 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 SLC19A2O60779 497 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 PITX3O75364 302 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 OR9G9P0C7N8 305 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 IL2RGP31785 369 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 EWSR1Q01844 656 aaKnown RBP eCLIP4.56□□□□□ -1.68
CD47-201ENST00000355354 ECH1Q13011 328 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 RNF212Q495C1 297 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 MZT2BQ6NZ67 158 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 ZNF525Q8N782 197 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 OR9G1Q8NH87 305 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 AQP10Q96PS8 301 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 SSBP3Q9BWW4 388 aaPredicted RBP4.56□□□□□ -1.68
CD47-201ENST00000355354 DEFB127Q9H1M4 99 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 KCNJ16Q9NPI9 418 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 KLRF1Q9NZS2 232 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 C5orf49A4QMS7 147 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 OR6C6A6NF89 314 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 FABP1P07148 127 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 TCN2P20062 427 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 GALP22466 123 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 ZNF133P52736 654 aaPredicted RBP4.56□□□□□ -1.68
CD47-201ENST00000355354 PHF19Q5T6S3 580 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 TMEM42Q69YG0 159 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 SLC35E3Q7Z769 313 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 ZNF440Q8IYI8 595 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 POM121L2Q96KW2 1035 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 ALX4Q9H161 411 aaPredicted RBP4.56□□□□□ -1.68
CD47-201ENST00000355354 RNF122Q9H9V4 155 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 TAF9BQ9HBM6 251 aa4.56□□□□□ -1.68
CD47-201ENST00000355354 METTL21EPA6NDL7 271 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 S1PR2O95136 353 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 CDS2O95674 445 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 DANCRP0C864 163 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 NR2C1P13056 603 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 NKX6-1P78426 367 aaPredicted RBP4.55□□□□□ -1.68
CD47-201ENST00000355354 BIKQ13323 160 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 FXYD3Q14802 87 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 RAET1LQ5VY80 246 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 PLEKHF2Q9H8W4 249 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 FANCFQ9NPI8 374 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 ZNF71Q9NQZ8 489 aaPredicted RBP4.55□□□□□ -1.68
CD47-201ENST00000355354 CARHSP1Q9Y2V2 147 aaKnown RBP4.55□□□□□ -1.68
CD47-201ENST00000355354 TOX4O94842 621 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 SCAF4O95104 1147 aaKnown RBP4.55□□□□□ -1.68
CD47-201ENST00000355354 IRF2P14316 349 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 CBLN1P23435 193 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 TGIF2LXQ8IUE1 241 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 TEX45Q8NA69 505 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 OR51T1Q8NGJ9 327 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 SSMEM1Q8WWF3 244 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 SPACA9Q96E40 222 aaPredicted RBP4.55□□□□□ -1.68
CD47-201ENST00000355354 PDCD10Q9BUL8 212 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 RNASE7Q9H1E1 156 aaKnown RBP4.55□□□□□ -1.68
CD47-201ENST00000355354 OR51I2Q9H344 312 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 DNAH17Q9UFH2 4485 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 A0A1B0GX78 115 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 RP2O75695 350 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 SFT2D2O95562 160 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 FABP6P51161 128 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 DLK1P80370 383 aa4.55□□□□□ -1.68
CD47-201ENST00000355354 MRPL28Q13084 256 aaKnown RBP4.55□□□□□ -1.68
CD47-201ENST00000355354 Q6P435 159 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms