RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 SSX2Q16385 188 aa19.6■□□□□ 0.73
HMGA2-201ENST00000354636 FAM71F2Q6NXP2 309 aa19.6■□□□□ 0.73
HMGA2-201ENST00000354636 LPCAT3Q6P1A2 487 aa19.6■□□□□ 0.73
HMGA2-201ENST00000354636 DRAM1Q8N682 238 aa19.6■□□□□ 0.73
HMGA2-201ENST00000354636 RTN4IP1Q8WWV3 396 aaPredicted RBP19.6■□□□□ 0.73
HMGA2-201ENST00000354636 RPEQ96AT9 228 aa19.6■□□□□ 0.73
HMGA2-201ENST00000354636 S1PR3Q99500 378 aa19.6■□□□□ 0.73
HMGA2-201ENST00000354636 OOSP1A8MZH6 123 aa19.59■□□□□ 0.73
HMGA2-201ENST00000354636 CCR6P51684 374 aa19.59■□□□□ 0.73
HMGA2-201ENST00000354636 ZNF816Q0VGE8 651 aaPredicted RBP19.59■□□□□ 0.73
HMGA2-201ENST00000354636 ZNF818PQ6ZRF7 136 aa19.59■□□□□ 0.73
HMGA2-201ENST00000354636 MARCH1Q8TCQ1 289 aa19.59■□□□□ 0.73
HMGA2-201ENST00000354636 RSRP1Q9BUV0 290 aa19.59■□□□□ 0.73
HMGA2-201ENST00000354636 MXRA5Q9NR99 2828 aa19.58■□□□□ 0.73
HMGA2-201ENST00000354636 GAPDHP04406 335 aaKnown RBP19.58■□□□□ 0.73
HMGA2-201ENST00000354636 PAX6P26367 422 aa19.58■□□□□ 0.73
HMGA2-201ENST00000354636 REG1BP48304 166 aa19.58■□□□□ 0.73
HMGA2-201ENST00000354636 BAMBIQ13145 260 aa19.58■□□□□ 0.73
HMGA2-201ENST00000354636 DCTN2Q13561 401 aaKnown RBP19.58■□□□□ 0.73
HMGA2-201ENST00000354636 SURF2Q15527 256 aaPredicted RBP19.58■□□□□ 0.73
HMGA2-201ENST00000354636 SLC38A6Q8IZM9 456 aa19.58■□□□□ 0.73
HMGA2-201ENST00000354636 ZBTB34Q8NCN2 500 aa19.58■□□□□ 0.73
HMGA2-201ENST00000354636 AKR1E2Q96JD6 320 aa19.58■□□□□ 0.73
HMGA2-201ENST00000354636 MEGF9Q9H1U4 602 aa19.58■□□□□ 0.73
HMGA2-201ENST00000354636 NAV3Q8IVL0 2385 aa19.58■□□□□ 0.72
HMGA2-201ENST00000354636 SLC6A1P30531 599 aa19.57■□□□□ 0.72
HMGA2-201ENST00000354636 DEFA1P59665 94 aa19.57■□□□□ 0.72
HMGA2-201ENST00000354636 DEFA3P59666 94 aa19.57■□□□□ 0.72
HMGA2-201ENST00000354636 SCGB2A2Q13296 93 aa19.57■□□□□ 0.72
HMGA2-201ENST00000354636 MZT2BQ6NZ67 158 aa19.57■□□□□ 0.72
HMGA2-201ENST00000354636 TGIF2LXQ8IUE1 241 aa19.57■□□□□ 0.72
HMGA2-201ENST00000354636 BVESQ8NE79 360 aa19.57■□□□□ 0.72
HMGA2-201ENST00000354636 SLC25A21Q9BQT8 299 aaPredicted RBP19.57■□□□□ 0.72
HMGA2-201ENST00000354636 GPR132Q9UNW8 380 aa19.57■□□□□ 0.72
HMGA2-201ENST00000354636 TXNL1O43396 289 aa19.56■□□□□ 0.72
HMGA2-201ENST00000354636 FBP1P09467 338 aa19.56■□□□□ 0.72
HMGA2-201ENST00000354636 PGAM2P15259 253 aa19.56■□□□□ 0.72
HMGA2-201ENST00000354636 EIF4EBP1Q13541 118 aaPredicted RBP19.56■□□□□ 0.72
HMGA2-201ENST00000354636 RBMS2Q15434 407 aaKnown RBP19.56■□□□□ 0.72
HMGA2-201ENST00000354636 TUSC1Q2TAM9 212 aa19.56■□□□□ 0.72
HMGA2-201ENST00000354636 OR8H3Q8N146 312 aa19.56■□□□□ 0.72
HMGA2-201ENST00000354636 POC5Q8NA72 575 aa19.56■□□□□ 0.72
HMGA2-201ENST00000354636 IGHV1-3A0A0C4DH29 117 aa19.56■□□□□ 0.72
HMGA2-201ENST00000354636 A0A1W2PPI3 338 aa19.56■□□□□ 0.72
HMGA2-201ENST00000354636 M0R1X1 148 aa19.56■□□□□ 0.72
HMGA2-201ENST00000354636 GPR31O00270 319 aa19.56■□□□□ 0.72
HMGA2-201ENST00000354636 DEFB112Q30KQ8 113 aa19.56■□□□□ 0.72
HMGA2-201ENST00000354636 CCDC144NLQ6NUI1 221 aa19.56■□□□□ 0.72
HMGA2-201ENST00000354636 ZFAND1Q8TCF1 268 aa19.56■□□□□ 0.72
HMGA2-201ENST00000354636 ZNF486Q96H40 463 aaPredicted RBP19.56■□□□□ 0.72
HMGA2-201ENST00000354636 NABP2Q9BQ15 211 aa19.56■□□□□ 0.72
HMGA2-201ENST00000354636 NDUFB6O95139 128 aa19.55■□□□□ 0.72
HMGA2-201ENST00000354636 CT45A6P0DMU7 189 aa19.55■□□□□ 0.72
HMGA2-201ENST00000354636 CT45A5P0DMU8 189 aa19.55■□□□□ 0.72
HMGA2-201ENST00000354636 CT45A7P0DMV0 189 aa19.55■□□□□ 0.72
HMGA2-201ENST00000354636 PLA1AQ53H76 456 aa19.55■□□□□ 0.72
HMGA2-201ENST00000354636 DRAXINQ8NBI3 349 aaPredicted RBP19.55■□□□□ 0.72
HMGA2-201ENST00000354636 SCGB3A2Q96PL1 93 aa19.55■□□□□ 0.72
HMGA2-201ENST00000354636 MRPL20Q9BYC9 149 aaKnown RBP19.55■□□□□ 0.72
HMGA2-201ENST00000354636 VSIG4Q9Y279 399 aa19.55■□□□□ 0.72
HMGA2-201ENST00000354636 MTORP42345 2549 aa19.55■□□□□ 0.72
HMGA2-201ENST00000354636 CTSDP07339 412 aaPredicted RBP19.54■□□□□ 0.72
HMGA2-201ENST00000354636 PI3P19957 117 aa19.54■□□□□ 0.72
HMGA2-201ENST00000354636 DUTP33316 252 aaKnown RBP19.54■□□□□ 0.72
HMGA2-201ENST00000354636 LINC00205P59089 165 aa19.54■□□□□ 0.72
HMGA2-201ENST00000354636 CMTM1Q8IZ96 169 aa19.54■□□□□ 0.72
HMGA2-201ENST00000354636 ZDHHC22Q8N966 263 aa19.54■□□□□ 0.72
HMGA2-201ENST00000354636 ZDHHC16Q969W1 377 aa19.54■□□□□ 0.72
HMGA2-201ENST00000354636 RTBDNQ9BSG5 229 aaPredicted RBP19.54■□□□□ 0.72
HMGA2-201ENST00000354636 DPAGT1Q9H3H5 408 aa19.54■□□□□ 0.72
HMGA2-201ENST00000354636 PRDM13Q9H4Q3 707 aa19.54■□□□□ 0.72
HMGA2-201ENST00000354636 C5orf66Q9H5L9 145 aa19.54■□□□□ 0.72
HMGA2-201ENST00000354636 MDFIC2A0A1B0GVS7 189 aa19.53■□□□□ 0.72
HMGA2-201ENST00000354636 FAM240BA0A1B0GVZ2 78 aa19.53■□□□□ 0.72
HMGA2-201ENST00000354636 TNFSF12O43508 249 aa19.53■□□□□ 0.72
HMGA2-201ENST00000354636 CRLF1O75462 422 aa19.53■□□□□ 0.72
HMGA2-201ENST00000354636 HABP2Q14520 560 aaPredicted RBP19.53■□□□□ 0.72
HMGA2-201ENST00000354636 PHLDA2Q53GA4 152 aa19.53■□□□□ 0.72
HMGA2-201ENST00000354636 ZNF66Q6ZN08 573 aa19.53■□□□□ 0.72
HMGA2-201ENST00000354636 CFHR4Q92496 578 aa19.53■□□□□ 0.72
HMGA2-201ENST00000354636 ZNF48Q96MX3 618 aaPredicted RBP19.53■□□□□ 0.72
HMGA2-201ENST00000354636 GPHA2Q96T91 129 aa19.53■□□□□ 0.72
HMGA2-201ENST00000354636 HSD17B10Q99714 261 aaKnown RBP19.53■□□□□ 0.72
HMGA2-201ENST00000354636 SLC2A9Q9NRM0 540 aa19.53■□□□□ 0.72
HMGA2-201ENST00000354636 NSD1Q96L73 2696 aaPredicted RBP19.52■□□□□ 0.72
HMGA2-201ENST00000354636 TIMM23O14925 209 aa19.52■□□□□ 0.72
HMGA2-201ENST00000354636 PGLYRP1O75594 196 aaPredicted RBP19.52■□□□□ 0.72
HMGA2-201ENST00000354636 RPL30P62888 115 aaKnown RBP19.52■□□□□ 0.72
HMGA2-201ENST00000354636 MOB3BQ86TA1 216 aa19.52■□□□□ 0.72
HMGA2-201ENST00000354636 OCEL1Q9H607 264 aa19.52■□□□□ 0.72
HMGA2-201ENST00000354636 TEP1Q99973 2627 aaKnown RBP19.52■□□□□ 0.72
HMGA2-201ENST00000354636 LINC00473A8K010 186 aa19.51■□□□□ 0.71
HMGA2-201ENST00000354636 VGLL3A8MV65 326 aa19.51■□□□□ 0.71
HMGA2-201ENST00000354636 TCRBP04435 133 aa19.51■□□□□ 0.71
HMGA2-201ENST00000354636 THBS3P49746 956 aa19.51■□□□□ 0.71
HMGA2-201ENST00000354636 ARHGDIBP52566 201 aa19.51■□□□□ 0.71
HMGA2-201ENST00000354636 PIGPP57054 158 aa19.51■□□□□ 0.71
HMGA2-201ENST00000354636 RND3P61587 244 aa19.51■□□□□ 0.71
HMGA2-201ENST00000354636 GLDNQ6ZMI3 551 aaPredicted RBP19.51■□□□□ 0.71
HMGA2-201ENST00000354636 NRARPQ7Z6K4 114 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms