RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 SNRPBP14678 240 aaKnown RBP11.15□□□□□ -0.62
PRPF40A-201ENST00000354363 CEACAM6P40199 344 aa11.15□□□□□ -0.62
PRPF40A-201ENST00000354363 HLA-DRB3P79483 266 aa11.15□□□□□ -0.62
PRPF40A-201ENST00000354363 SPHARQ15513 63 aa11.15□□□□□ -0.62
PRPF40A-201ENST00000354363 PYHIN1Q6K0P9 492 aa11.15□□□□□ -0.62
PRPF40A-201ENST00000354363 ACSM6Q6P461 480 aa11.15□□□□□ -0.62
PRPF40A-201ENST00000354363 UNQ5815/PRO19632Q6UWF5 114 aa11.15□□□□□ -0.62
PRPF40A-201ENST00000354363 OR6M1Q8NGM8 313 aa11.15□□□□□ -0.62
PRPF40A-201ENST00000354363 ARPC1AQ92747 370 aa11.15□□□□□ -0.62
PRPF40A-201ENST00000354363 CLCC1Q96S66 551 aa11.15□□□□□ -0.62
PRPF40A-201ENST00000354363 RNF5Q99942 180 aa11.15□□□□□ -0.62
PRPF40A-201ENST00000354363 FAM103A1Q9BTL3 118 aaKnown RBP11.15□□□□□ -0.62
PRPF40A-201ENST00000354363 PROP1O75360 226 aa11.14□□□□□ -0.63
PRPF40A-201ENST00000354363 IGHV3-11P01762 117 aa11.14□□□□□ -0.63
PRPF40A-201ENST00000354363 GP9P14770 177 aa11.14□□□□□ -0.63
PRPF40A-201ENST00000354363 ZBTB25P24278 435 aa11.14□□□□□ -0.63
PRPF40A-201ENST00000354363 PSG5Q15238 335 aa11.14□□□□□ -0.63
PRPF40A-201ENST00000354363 AKIRIN2Q53H80 203 aa11.14□□□□□ -0.63
PRPF40A-201ENST00000354363 ACTBL2Q562R1 376 aa11.14□□□□□ -0.63
PRPF40A-201ENST00000354363 OVCH2Q7RTZ1 564 aa11.14□□□□□ -0.63
PRPF40A-201ENST00000354363 FAM89BQ8N5H3 189 aa11.14□□□□□ -0.63
PRPF40A-201ENST00000354363 OR6Q1Q8NGQ2 317 aa11.14□□□□□ -0.63
PRPF40A-201ENST00000354363 EDARADDQ8WWZ3 215 aa11.14□□□□□ -0.63
PRPF40A-201ENST00000354363 RCHY1Q96PM5 261 aa11.14□□□□□ -0.63
PRPF40A-201ENST00000354363 GFI1Q99684 422 aa11.14□□□□□ -0.63
PRPF40A-201ENST00000354363 METTL1Q9UBP6 276 aaKnown RBP11.14□□□□□ -0.63
PRPF40A-201ENST00000354363 RNF150Q9ULK6 438 aa11.14□□□□□ -0.63
PRPF40A-201ENST00000354363 FOXI3A8MTJ6 420 aaPredicted RBP11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 PTGES3LE9PB15 166 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 HSPA12AO43301 675 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 CA2P00918 260 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 HSPB1P04792 205 aaKnown RBP11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 SCTP09683 121 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 OR8U9P0C7N5 309 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 P2RY14Q15391 338 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 MED22Q15528 200 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 ZNF562Q6V9R5 426 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 DRAXINQ8NBI3 349 aaPredicted RBP11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 LFNGQ8NES3 379 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 PTX4Q96A99 478 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 RHOVQ96L33 236 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 MS4A10Q96PG2 267 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 URM1Q9BTM9 101 aaKnown RBP11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 Q9N2K0 584 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 MGAT4AQ9UM21 535 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 DYNC2H1Q8NCM8 4307 aaKnown RBP11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 TNCP24821 2201 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 SLC17A2O00624 439 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 IGKV1-16P04430 117 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 FRMD6-AS1P0C7T7 363 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 CPEP16870 476 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 TMEM50BP56557 158 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 LINC00205P59089 165 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 TPPP2P59282 170 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 PITPNAQ00169 270 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 LIPKQ5VXJ0 399 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 ZNF383Q8NA42 475 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 FLYWCH2Q96CP2 140 aaKnown RBP11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 HSF4Q9ULV5 492 aa11.13□□□□□ -0.63
PRPF40A-201ENST00000354363 TRIM64CA6NLI5 447 aa11.12□□□□□ -0.63
PRPF40A-201ENST00000354363 SPDEFO95238 335 aa11.12□□□□□ -0.63
PRPF40A-201ENST00000354363 ARSBP15848 533 aa11.12□□□□□ -0.63
PRPF40A-201ENST00000354363 RPS16P62249 146 aaKnown RBP11.12□□□□□ -0.63
PRPF40A-201ENST00000354363 IRF3Q14653 427 aa11.12□□□□□ -0.63
PRPF40A-201ENST00000354363 TMEM91Q6ZNR0 172 aa11.12□□□□□ -0.63
PRPF40A-201ENST00000354363 MUC7Q8TAX7 377 aa11.12□□□□□ -0.63
PRPF40A-201ENST00000354363 UFD1Q92890 307 aa11.12□□□□□ -0.63
PRPF40A-201ENST00000354363 TMEM203Q969S6 136 aa11.12□□□□□ -0.63
PRPF40A-201ENST00000354363 ARHGAP5-AS1Q96IT6 56 aa11.12□□□□□ -0.63
PRPF40A-201ENST00000354363 TSNAXQ99598 290 aaKnown RBP11.12□□□□□ -0.63
PRPF40A-201ENST00000354363 SLA2Q9H6Q3 261 aa11.12□□□□□ -0.63
PRPF40A-201ENST00000354363 PLGRKTQ9HBL7 147 aa11.12□□□□□ -0.63
PRPF40A-201ENST00000354363 ZNF221Q9UK13 617 aa11.12□□□□□ -0.63
PRPF40A-201ENST00000354363 IGKV1-6A0A0C4DH72 117 aa11.11□□□□□ -0.63
PRPF40A-201ENST00000354363 ARPC1BO15143 372 aaKnown RBP11.11□□□□□ -0.63
PRPF40A-201ENST00000354363 TRGV3P03979 118 aa11.11□□□□□ -0.63
PRPF40A-201ENST00000354363 TFAP2AP05549 437 aa11.11□□□□□ -0.63
PRPF40A-201ENST00000354363 VEGFCP49767 419 aa11.11□□□□□ -0.63
PRPF40A-201ENST00000354363 OR4C12Q96R67 309 aa11.11□□□□□ -0.63
PRPF40A-201ENST00000354363 PECRQ9BY49 303 aa11.11□□□□□ -0.63
PRPF40A-201ENST00000354363 C12orf4Q9NQ89 552 aa11.11□□□□□ -0.63
PRPF40A-201ENST00000354363 SCN3BQ9NY72 215 aa11.11□□□□□ -0.63
PRPF40A-201ENST00000354363 AK6Q9Y3D8 172 aaKnown RBP11.11□□□□□ -0.63
PRPF40A-201ENST00000354363 APOA2P02652 100 aa11.1□□□□□ -0.63
PRPF40A-201ENST00000354363 CD40LGP29965 261 aa11.1□□□□□ -0.63
PRPF40A-201ENST00000354363 RPS25P62851 125 aaKnown RBP11.1□□□□□ -0.63
PRPF40A-201ENST00000354363 FXYD3Q14802 87 aa11.1□□□□□ -0.63
PRPF40A-201ENST00000354363 RAB11BQ15907 218 aa11.1□□□□□ -0.63
PRPF40A-201ENST00000354363 CASC10Q5T4H9 136 aa11.1□□□□□ -0.63
PRPF40A-201ENST00000354363 PDPNQ86YL7 162 aa11.1□□□□□ -0.63
PRPF40A-201ENST00000354363 CMSS1Q9BQ75 279 aaKnown RBP11.1□□□□□ -0.63
PRPF40A-201ENST00000354363 VCXQ9H320 206 aa11.1□□□□□ -0.63
PRPF40A-201ENST00000354363 SLC25A17O43808 307 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 CLDN12P56749 244 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 SSBP2P81877 361 aaPredicted RBP11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 TPBGQ13641 420 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 SRSF7Q16629 238 aaKnown RBP eCLIP11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 HAPLN4Q86UW8 402 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 GRPEL2Q8TAA5 225 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 ELOVL1Q9BW60 279 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms