RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 IGKV1-6A0A0C4DH72 117 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 hCG_38984A0A1B0GV85 526 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 A0A1W2PN81 502 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 TNFSF12O43508 249 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 PAGE4O60829 102 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 NDUFB8O95169 186 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 PSG2P11465 335 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 COX5AP20674 150 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 NPPCP23582 126 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 DSCR4P56555 118 aaPredicted RBP12.66□□□□□ -0.38
TRAF3-202ENST00000351691 RNASE8Q8TDE3 154 aaKnown RBP12.66□□□□□ -0.38
TRAF3-202ENST00000351691 IMMP1LQ96LU5 166 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 TXNDC17Q9BRA2 123 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 SLC25A22Q9H936 323 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 OR2W1Q9Y3N9 320 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 IGHV1-45A0A0A0MS14 117 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 C11orf94C9JXX5 98 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 CRISP2P16562 243 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 TFPI2P48307 235 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 PTTG1IPP53801 180 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 PDCD1Q15116 288 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 ZNF324BQ6AW86 544 aaPredicted RBP12.66□□□□□ -0.38
TRAF3-202ENST00000351691 PCSK4Q6UW60 755 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 FAM180AQ6UWF9 173 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 C1orf174Q8IYL3 243 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 OR1F12Q8NHA8 337 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 VN1R17PQ8TDU5 208 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 SFRP2Q96HF1 295 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 TMEM147Q9BVK8 224 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 KCNIP2Q9NS61 270 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 OCIAD1Q9NX40 245 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 FRYLO94915 3013 aa12.66□□□□□ -0.38
TRAF3-202ENST00000351691 ZNF816-ZNF321PA0A0X1KG74 233 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 TNFSF11O14788 317 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 CBR3O75828 277 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 IGKV1-39P01597 117 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 IGKV1D-39P04432 117 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 CDKN1AP38936 164 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 PLCXD3Q63HM9 321 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 CALHM1Q8IU99 346 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 OR10V1Q8NGI7 309 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 SGMS2Q8NHU3 365 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 GATAD1Q8WUU5 269 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 RBM24Q9BX46 236 aaKnown RBP12.65□□□□□ -0.38
TRAF3-202ENST00000351691 ZNF703Q9H7S9 590 aaPredicted RBP12.65□□□□□ -0.38
TRAF3-202ENST00000351691 NPIPA2E9PIF3 369 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 DEGS1O15121 323 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 CCL25O15444 150 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 DNPH1O43598 174 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 SERF1AO75920 110 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 LIFP15018 202 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 UBE2V1Q13404 147 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 ZNF611Q8N823 705 aa12.65□□□□□ -0.38
TRAF3-202ENST00000351691 PATZ1Q9HBE1 687 aaKnown RBP12.65□□□□□ -0.38
TRAF3-202ENST00000351691 CACNA1EQ15878 2313 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 MDFIC2A0A1B0GVS7 189 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 NPIPB11E5RHQ5 1161 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 NPIPA3F8WFD2 350 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 IGKV1-5P01602 117 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 OR5G3P0C626 314 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 FGF12P61328 243 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 RSPO4Q2I0M5 234 aaPredicted RBP12.64□□□□□ -0.39
TRAF3-202ENST00000351691 HLA-BQ31612 363 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 MORN2Q502X0 79 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 SPANXN5Q5MJ07 72 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 PRAMEF20Q5VT98 475 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 Q8N976 141 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 PILRBQ9UKJ0 227 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 SAA2-SAA4A0A096LPE2 208 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 TRBV9A0A0B4J1U6 114 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 GJE1A6NN92 205 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 REG1AP05451 166 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 SSR4P51571 173 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 GNB1P62873 340 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 FFAR4Q5NUL3 377 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 PMS2CLQ68D20 193 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 STPG4Q8N801 248 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 SF3B5Q9BWJ5 86 aaKnown RBP12.64□□□□□ -0.39
TRAF3-202ENST00000351691 ULBP2Q9BZM5 246 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 ZNF552Q9H707 407 aaPredicted RBP12.64□□□□□ -0.39
TRAF3-202ENST00000351691 SH2D2AQ9NP31 389 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 ZNF586Q9NXT0 402 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 LAMTOR2Q9Y2Q5 125 aa12.64□□□□□ -0.39
TRAF3-202ENST00000351691 BDP1A6H8Y1 2624 aa12.63□□□□□ -0.39
TRAF3-202ENST00000351691 GRIFINA4D1Z8 144 aa12.63□□□□□ -0.39
TRAF3-202ENST00000351691 C1QTNF9BB2RNN3 333 aa12.63□□□□□ -0.39
TRAF3-202ENST00000351691 COX6A1P12074 109 aa12.63□□□□□ -0.39
TRAF3-202ENST00000351691 SUMO1P63165 101 aaKnown RBP12.63□□□□□ -0.39
TRAF3-202ENST00000351691 MMDQ15546 238 aa12.63□□□□□ -0.39
TRAF3-202ENST00000351691 IFI44Q8TCB0 444 aa12.63□□□□□ -0.39
TRAF3-202ENST00000351691 MRGPRDQ8TDS7 321 aa12.63□□□□□ -0.39
TRAF3-202ENST00000351691 KITLGP21583 273 aa12.62□□□□□ -0.39
TRAF3-202ENST00000351691 DUSP3P51452 185 aaPredicted RBP12.62□□□□□ -0.39
TRAF3-202ENST00000351691 RAC1P63000 192 aa12.62□□□□□ -0.39
TRAF3-202ENST00000351691 RPP30P78346 268 aaKnown RBP12.62□□□□□ -0.39
TRAF3-202ENST00000351691 ZXDAP98168 799 aa12.62□□□□□ -0.39
TRAF3-202ENST00000351691 VWC2Q2TAL6 325 aa12.62□□□□□ -0.39
TRAF3-202ENST00000351691 AARDQ4LEZ3 155 aa12.62□□□□□ -0.39
TRAF3-202ENST00000351691 LINC00596Q86U02 117 aa12.62□□□□□ -0.39
TRAF3-202ENST00000351691 OR51H1Q8NH63 302 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms