RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 SSTR5P35346 364 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 ZNF816Q0VGE8 651 aaPredicted RBP18.5■□□□□ 0.55
UPF3A-201ENST00000351487 TMEM41BQ5BJD5 291 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 TRAT1Q6PIZ9 186 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 IQCF2Q8IXL9 164 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 TAF15Q92804 592 aaKnown RBP eCLIP18.5■□□□□ 0.55
UPF3A-201ENST00000351487 OPN3Q9H1Y3 402 aaPredicted RBP18.5■□□□□ 0.55
UPF3A-201ENST00000351487 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.5■□□□□ 0.55
UPF3A-201ENST00000351487 GNG13Q9P2W3 67 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 C17orf98A8MV24 154 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 CLDN14O95500 239 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 S100A6P06703 90 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 CEBPGP53567 150 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 OR2B11Q5JQS5 317 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 HEPN1Q6WQI6 88 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 ZNF66Q6ZN08 573 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 BHLHA15Q7RTS1 189 aaPredicted RBP18.5■□□□□ 0.55
UPF3A-201ENST00000351487 C1QL4Q86Z23 238 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 TCTEX1D2Q8WW35 142 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 LAMP3Q9UQV4 416 aa18.5■□□□□ 0.55
UPF3A-201ENST00000351487 TAGLN2P37802 199 aaKnown RBP18.49■□□□□ 0.55
UPF3A-201ENST00000351487 DLK1P80370 383 aa18.49■□□□□ 0.55
UPF3A-201ENST00000351487 CENPVQ7Z7K6 275 aaPredicted RBP18.49■□□□□ 0.55
UPF3A-201ENST00000351487 TAAR6Q96RI8 345 aa18.49■□□□□ 0.55
UPF3A-201ENST00000351487 ZNF665Q9H7R5 613 aa18.49■□□□□ 0.55
UPF3A-201ENST00000351487 HEATR1Q9H583 2144 aaKnown RBP18.49■□□□□ 0.55
UPF3A-201ENST00000351487 UBE2L5PA0A1B0GUS4 154 aa18.49■□□□□ 0.55
UPF3A-201ENST00000351487 MBD3L4A6NDZ8 208 aaPredicted RBP18.49■□□□□ 0.55
UPF3A-201ENST00000351487 MBD3L3A6NE82 208 aaPredicted RBP18.49■□□□□ 0.55
UPF3A-201ENST00000351487 MBD3L5A6NJ08 208 aaPredicted RBP18.49■□□□□ 0.55
UPF3A-201ENST00000351487 C15orf65H3BRN8 121 aa18.49■□□□□ 0.55
UPF3A-201ENST00000351487 RAB29O14966 203 aa18.49■□□□□ 0.55
UPF3A-201ENST00000351487 MEOX2P50222 304 aa18.49■□□□□ 0.55
UPF3A-201ENST00000351487 HTD2P86397 168 aa18.49■□□□□ 0.55
UPF3A-201ENST00000351487 SSX7Q7RTT5 188 aa18.49■□□□□ 0.55
UPF3A-201ENST00000351487 CD177Q8N6Q3 437 aa18.49■□□□□ 0.55
UPF3A-201ENST00000351487 MBD3L2Q8NHZ7 208 aaPredicted RBP18.49■□□□□ 0.55
UPF3A-201ENST00000351487 LRRC29Q8WV35 223 aa18.49■□□□□ 0.55
UPF3A-201ENST00000351487 SLC25A15Q9Y619 301 aa18.49■□□□□ 0.55
UPF3A-201ENST00000351487 DEFB109BQ30KR1 87 aa18.48■□□□□ 0.55
UPF3A-201ENST00000351487 FAM90A2PQ658T7 463 aa18.48■□□□□ 0.55
UPF3A-201ENST00000351487 ADAM5Q6NVV9 412 aa18.48■□□□□ 0.55
UPF3A-201ENST00000351487 HSD17B10Q99714 261 aaKnown RBP18.48■□□□□ 0.55
UPF3A-201ENST00000351487 MRPL37Q9BZE1 423 aaKnown RBP18.48■□□□□ 0.55
UPF3A-201ENST00000351487 METTL1Q9UBP6 276 aaKnown RBP18.48■□□□□ 0.55
UPF3A-201ENST00000351487 A0A1W2PPE3 182 aa18.47■□□□□ 0.55
UPF3A-201ENST00000351487 ZNF737O75373 536 aa18.47■□□□□ 0.55
UPF3A-201ENST00000351487 EIF3GO75821 320 aaKnown RBP eCLIP18.47■□□□□ 0.55
UPF3A-201ENST00000351487 PMS2P11Q13670 270 aa18.47■□□□□ 0.55
UPF3A-201ENST00000351487 ATP6V1FQ16864 119 aa18.47■□□□□ 0.55
UPF3A-201ENST00000351487 LCN15Q6UWW0 184 aa18.47■□□□□ 0.55
UPF3A-201ENST00000351487 SEM1Q6ZVN7 128 aa18.47■□□□□ 0.55
UPF3A-201ENST00000351487 TPRX1Q8N7U7 411 aa18.47■□□□□ 0.55
UPF3A-201ENST00000351487 AGMATQ9BSE5 352 aa18.47■□□□□ 0.55
UPF3A-201ENST00000351487 SIRT7Q9NRC8 400 aa18.47■□□□□ 0.55
UPF3A-201ENST00000351487 IGHV2-5P01817 119 aa18.47■□□□□ 0.55
UPF3A-201ENST00000351487 ADH4P08319 380 aa18.47■□□□□ 0.55
UPF3A-201ENST00000351487 OR8G2PQ6IF36 304 aa18.47■□□□□ 0.55
UPF3A-201ENST00000351487 BTNL3Q6UXE8 466 aa18.47■□□□□ 0.55
UPF3A-201ENST00000351487 BEND4Q6ZU67 534 aa18.47■□□□□ 0.55
UPF3A-201ENST00000351487 SEBOXQ9HB31 216 aaPredicted RBP18.47■□□□□ 0.55
UPF3A-201ENST00000351487 CXorf65A6NEN9 183 aa18.46■□□□□ 0.55
UPF3A-201ENST00000351487 ZFP92A6NM28 416 aa18.46■□□□□ 0.55
UPF3A-201ENST00000351487 PMS2P5A8MQ11 134 aa18.46■□□□□ 0.55
UPF3A-201ENST00000351487 SRRM5B3KS81 715 aa18.46■□□□□ 0.55
UPF3A-201ENST00000351487 SPINT2O43291 252 aa18.46■□□□□ 0.55
UPF3A-201ENST00000351487 FAM90A1Q86YD7 464 aa18.46■□□□□ 0.55
UPF3A-201ENST00000351487 FAM216AQ8WUB2 273 aa18.46■□□□□ 0.55
UPF3A-201ENST00000351487 P2RX4Q99571 388 aa18.46■□□□□ 0.55
UPF3A-201ENST00000351487 LINC00473A8K010 186 aa18.46■□□□□ 0.55
UPF3A-201ENST00000351487 PRDX2P32119 198 aa18.46■□□□□ 0.55
UPF3A-201ENST00000351487 CIB3Q96Q77 187 aaPredicted RBP18.46■□□□□ 0.55
UPF3A-201ENST00000351487 TMEM147Q9BVK8 224 aa18.46■□□□□ 0.55
UPF3A-201ENST00000351487 CLN8Q9UBY8 286 aa18.46■□□□□ 0.55
UPF3A-201ENST00000351487 MAP1LC3B2A6NCE7 125 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 B4DEV8 164 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 CFHR2P36980 270 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 MRGPRGQ86SM5 289 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 CA5BP1Q8WTZ4 195 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 MAP1LC3BQ9GZQ8 125 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 IGHV3-43A0A0B4J1X8 118 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 PCP4L1A6NKN8 68 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 ZNF727A8MUV8 499 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 S100A8P05109 93 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 IGHV3-43DP0DP04 118 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 EGR1P18146 543 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 EIF2S3P41091 472 aaKnown RBP18.45■□□□□ 0.54
UPF3A-201ENST00000351487 FGF8P55075 233 aaPredicted RBP18.45■□□□□ 0.54
UPF3A-201ENST00000351487 RAB11AP62491 216 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 PNRC1Q12796 327 aaPredicted RBP18.45■□□□□ 0.54
UPF3A-201ENST00000351487 Q3ZCU0 254 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 H2BFWTQ7Z2G1 175 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 OR2Z1Q8NG97 314 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 DTD1Q8TEA8 209 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 PSG11Q9UQ72 335 aa18.45■□□□□ 0.54
UPF3A-201ENST00000351487 ST8SIA5O15466 376 aa18.44■□□□□ 0.54
UPF3A-201ENST00000351487 IFNA17P01571 189 aa18.44■□□□□ 0.54
UPF3A-201ENST00000351487 ELLP55199 621 aaPredicted RBP18.44■□□□□ 0.54
UPF3A-201ENST00000351487 OR2B8PP59922 312 aa18.44■□□□□ 0.54
UPF3A-201ENST00000351487 ELOBQ15370 118 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms