RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 WFDC1Q9HC57 220 aa12.61□□□□□ -0.39
NUP50-201ENST00000347635 TDRD6O60522 2096 aaKnown RBP12.61□□□□□ -0.39
NUP50-201ENST00000347635 IGHV3-13P01766 116 aa12.61□□□□□ -0.39
NUP50-201ENST00000347635 IGHV3-7P01780 117 aa12.61□□□□□ -0.39
NUP50-201ENST00000347635 HOXA5P20719 270 aa12.61□□□□□ -0.39
NUP50-201ENST00000347635 CD1BP29016 333 aa12.61□□□□□ -0.39
NUP50-201ENST00000347635 IZUMO4Q1ZYL8 232 aa12.61□□□□□ -0.39
NUP50-201ENST00000347635 PKIBQ9C010 78 aa12.61□□□□□ -0.39
NUP50-201ENST00000347635 TMEM167BQ9NRX6 74 aa12.61□□□□□ -0.39
NUP50-201ENST00000347635 DNM1P46Q6ZS02 220 aa12.61□□□□□ -0.39
NUP50-201ENST00000347635 RAB1CQ92928 201 aa12.61□□□□□ -0.39
NUP50-201ENST00000347635 MS4A5Q9H3V2 200 aa12.61□□□□□ -0.39
NUP50-201ENST00000347635 M0QZK8 103 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 GGCTO75223 188 aaKnown RBP12.6□□□□□ -0.39
NUP50-201ENST00000347635 CTSSP25774 331 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 SSX7Q7RTT5 188 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 RTN4RL2Q86UN3 420 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 CLDND2Q8NHS1 167 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 OR2J1Q9GZK6 312 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 TREM2Q9NZC2 230 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 PLXND1Q9Y4D7 1925 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 UCP1P25874 307 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 GABRA6Q16445 453 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 OR4P4Q8NGL7 312 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 Q8WTZ3 238 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 BSCL2Q96G97 398 aaPredicted RBP12.6□□□□□ -0.39
NUP50-201ENST00000347635 IGLV3-32A0A0A0MS00 114 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 KLRB1Q12918 225 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 CDCP2Q5VXM1 449 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 OR52L2PQ8NGH6 319 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 TMEM56Q96MV1 263 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 COA4Q9NYJ1 87 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 TMEM56-RWDD3S4R434 201 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 ARL2-SNX15V9GYD0 113 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 C5orf52A6NGY3 159 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 OR5AU1Q8NGC0 362 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 MSL2Q9HCI7 577 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 SEMA5BQ9P283 1151 aa12.6□□□□□ -0.39
NUP50-201ENST00000347635 ADH4P08319 380 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 COX5BP10606 129 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 DEFA4P12838 97 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 ARL3P36405 182 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 TNFRSF9Q07011 255 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 PRR7Q8TB68 274 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 OR6C3Q9NZP0 311 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 LYL1P12980 280 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 HES1Q14469 280 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 CALHM1Q8IU99 346 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 SGMS2Q8NHU3 365 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 DIRC2Q96SL1 478 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 BARX1Q9HBU1 254 aaPredicted RBP12.59□□□□□ -0.39
NUP50-201ENST00000347635 RPRMQ9NS64 109 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 TECRQ9NZ01 308 aaKnown RBP12.59□□□□□ -0.39
NUP50-201ENST00000347635 CDX4O14627 284 aaPredicted RBP12.59□□□□□ -0.39
NUP50-201ENST00000347635 GNB1P62873 340 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 HLA-DRB5Q30154 266 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 ZNF837Q96EG3 531 aaPredicted RBP12.59□□□□□ -0.39
NUP50-201ENST00000347635 TRAV38-1A0A0B4J264 116 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 AMTP48728 403 aa12.59□□□□□ -0.39
NUP50-201ENST00000347635 KBTBD11O94819 623 aa12.58□□□□□ -0.39
NUP50-201ENST00000347635 GZMHP20718 246 aa12.58□□□□□ -0.39
NUP50-201ENST00000347635 PSG5Q15238 335 aa12.58□□□□□ -0.39
NUP50-201ENST00000347635 TCTEX1D1Q8N7M0 179 aa12.58□□□□□ -0.39
NUP50-201ENST00000347635 SFXN3Q9BWM7 321 aa12.58□□□□□ -0.39
NUP50-201ENST00000347635 K7N7A8 449 aa12.58□□□□□ -0.4
NUP50-201ENST00000347635 ZIC3O60481 467 aa12.58□□□□□ -0.4
NUP50-201ENST00000347635 NDUFB4O95168 129 aa12.58□□□□□ -0.4
NUP50-201ENST00000347635 WDR61Q9GZS3 305 aaKnown RBP12.58□□□□□ -0.4
NUP50-201ENST00000347635 CACNA1IQ9P0X4 2223 aa12.58□□□□□ -0.4
NUP50-201ENST00000347635 EFNA2O43921 213 aa12.58□□□□□ -0.4
NUP50-201ENST00000347635 HBZP02008 142 aa12.58□□□□□ -0.4
NUP50-201ENST00000347635 COX19Q49B96 90 aa12.58□□□□□ -0.4
NUP50-201ENST00000347635 TMEM183AQ8IXX5 376 aa12.58□□□□□ -0.4
NUP50-201ENST00000347635 ZCCHC14Q8WYQ9 949 aaKnown RBP12.58□□□□□ -0.4
NUP50-201ENST00000347635 RCC1LQ96I51 464 aaKnown RBP12.58□□□□□ -0.4
NUP50-201ENST00000347635 LRRC3CA6NJW4 275 aa12.58□□□□□ -0.4
NUP50-201ENST00000347635 ICAM4Q14773 271 aa12.58□□□□□ -0.4
NUP50-201ENST00000347635 RNASEKQ6P5S7 137 aaKnown RBP12.58□□□□□ -0.4
NUP50-201ENST00000347635 RNF144BQ7Z419 303 aa12.58□□□□□ -0.4
NUP50-201ENST00000347635 ADTRPQ96IZ2 230 aa12.58□□□□□ -0.4
NUP50-201ENST00000347635 DMRTA2Q96SC8 542 aa12.58□□□□□ -0.4
NUP50-201ENST00000347635 GAL3ST2Q9H3Q3 398 aa12.58□□□□□ -0.4
NUP50-201ENST00000347635 IER3P46695 156 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 LRTM2Q8N967 370 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 PARLQ9H300 379 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 hADV38S2A0JD32 116 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 GDF9O60383 454 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 TEPPQ6URK8 271 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 ABHD14AQ9BUJ0 271 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 SRD5A3Q9H8P0 318 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 ZNF835Q9Y2P0 537 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 RPLP1P05386 114 aaKnown RBP12.57□□□□□ -0.4
NUP50-201ENST00000347635 COL10A1Q03692 680 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 ACSM6Q6P461 480 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 ABCA7Q8IZY2 2146 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 OR4D5Q8NGN0 318 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 OR5P3Q8WZ94 311 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 TBX15Q96SF7 602 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 TMEM204Q9BSN7 226 aa12.57□□□□□ -0.4
NUP50-201ENST00000347635 NAGKQ9UJ70 344 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms