RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 OR4A8P0C604 315 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 GABRA2P47869 451 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 GLIPR1P48060 266 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 RND3P61587 244 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 TNFAIP6P98066 277 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-202ENST00000345734 OR2F1Q13607 317 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 LY6DQ14210 128 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 HNF4GQ14541 408 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 ZNF345Q14585 488 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 ADIPOQQ15848 244 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 CFAP161Q6P656 301 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 UQCC3Q6UW78 93 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 TGIF2LYQ8IUE0 185 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 FAM185AQ8N0U4 392 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 LGI3Q8N145 548 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 ZCCHC24Q8N2G6 241 aaKnown RBP7.7□□□□□ -1.18
ATG4A-202ENST00000345734 SVBPQ8N300 66 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 MRGPRDQ8TDS7 321 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 TCTEX1D2Q8WW35 142 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 DCTN5Q9BTE1 182 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 TMPRSS5Q9H3S3 457 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 GCM1Q9NP62 436 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 DNAJB11Q9UBS4 358 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 ABCA4P78363 2273 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 ARFGEF3Q5TH69 2177 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 DCHS2Q6V1P9 2916 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 HIVEP3Q5T1R4 2406 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 MSGN1A6NI15 193 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 HSPA12AO43301 675 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 CIDEAO60543 219 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 ZNF737O75373 536 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 PGLYRP1O75594 196 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-202ENST00000345734 SPDEFO95238 335 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 IGLV2-14P01704 120 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 LYL1P12980 280 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 CD80P33681 288 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 CFHR2P36980 270 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 CEACAM6P40199 344 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 RAB2AP61019 212 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 EDDM3AQ14507 147 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 TMEM268Q5VZI3 342 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 PRSS54Q6PEW0 395 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 ALKAL2Q6UX46 152 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 PDZD9Q8IXQ8 264 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 SLC35G3Q8N808 338 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 INO80EQ8NBZ0 244 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-202ENST00000345734 OR10V1Q8NGI7 309 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 OR1S1Q8NH92 325 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 TMEM222Q9H0R3 208 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 PRORYQ9H606 182 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 UBE2J1Q9Y385 318 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-202ENST00000345734 SPTBN1Q01082 2364 aaKnown RBP7.69□□□□□ -1.18
ATG4A-202ENST00000345734 KANTRA0A1W2PQU2 76 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 NKX2-6A6NCS4 301 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 TEX46H3BTG2 121 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 BCL2L11O43521 198 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 ATG12O94817 140 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 CYB5R3P00387 301 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-202ENST00000345734 HBZP02008 142 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 ASCL1P50553 236 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 ERVFRD-1P60508 538 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 DEFA5Q01523 94 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 CDSNQ15517 529 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 CR1LQ2VPA4 569 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 C9orf152Q5JTZ5 239 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 CMTM1Q8IZ96 169 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 SELENOHQ8IZQ5 122 aaKnown RBP7.69□□□□□ -1.18
ATG4A-202ENST00000345734 OR52L2PQ8NGH6 319 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 OR52M1Q8NGK5 317 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 OR13A1Q8NGR1 328 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 NEUROG1Q92886 237 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 ZFP57Q9NU63 452 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 KCNIP1Q9NZI2 227 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 IL19Q9UHD0 177 aa7.69□□□□□ -1.18
ATG4A-202ENST00000345734 TANC2Q9HCD6 1990 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 OOEPA6NGQ2 149 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 HSBP1L1C9JCN9 74 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 OR8U9P0C7N5 309 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 SSTR5P35346 364 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 LUMP51884 338 aaPredicted RBP7.68□□□□□ -1.18
ATG4A-202ENST00000345734 CCL8P80075 99 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 GNMTQ14749 295 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 MAJINQ3KP22 176 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 RBMS3Q6XE24 437 aaKnown RBP7.68□□□□□ -1.18
ATG4A-202ENST00000345734 FAM90A1Q86YD7 464 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 ZNRF1Q8ND25 227 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 SLC24A4Q8NFF2 622 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 OR8U1Q8NH10 309 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 LINC01560Q8TB33 94 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 CXorf58Q96LI9 332 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 TMEM56Q96MV1 263 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 RNF7Q9UBF6 113 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 ZDHHC8Q9ULC8 765 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 PPP1R3CQ9UQK1 317 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 LSM5Q9Y4Y9 91 aaKnown RBP7.68□□□□□ -1.18
ATG4A-202ENST00000345734 TMEM56-RWDD3S4R434 201 aa7.68□□□□□ -1.18
ATG4A-202ENST00000345734 SHISA9B4DS77 424 aa7.67□□□□□ -1.18
ATG4A-202ENST00000345734 MBPP02686 304 aaPredicted RBP7.67□□□□□ -1.18
ATG4A-202ENST00000345734 LINC00614P0C842 121 aa7.67□□□□□ -1.18
ATG4A-202ENST00000345734 TNFSF4P23510 183 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms