RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 GPR137BO60478 399 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 IFNA6P05013 189 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 FCER2P06734 321 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 SAA2P0DJI9 122 aaPredicted RBP9.52□□□□□ -0.89
SNCA-202ENST00000345009 TBPP20226 339 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 NFYAP23511 347 aaPredicted RBP9.52□□□□□ -0.89
SNCA-202ENST00000345009 PAX6P26367 422 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 FCGR2CP31995 323 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 MC5RP33032 325 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 TSPAN5P62079 268 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 TAGLNQ01995 201 aaKnown RBP9.52□□□□□ -0.89
SNCA-202ENST00000345009 LY6EQ16553 131 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 ZNF833PQ6ZTB9 187 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 TMEM17Q86X19 198 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 OR6F1Q8NGZ6 308 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 OR2T10Q8NGZ9 312 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 OR52I2Q8NH67 350 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 OR56B4Q8NH76 319 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 PIFOQ8TCI5 191 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 GIMAP1Q8WWP7 306 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 ABHD14BQ96IU4 210 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 NPFFR1Q9GZQ6 430 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 IFI27L2Q9H2X8 130 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 EHFQ9NZC4 300 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 ZNF107Q9UII5 783 aaPredicted RBP9.52□□□□□ -0.89
SNCA-202ENST00000345009 ANAPC10Q9UM13 185 aa9.52□□□□□ -0.89
SNCA-202ENST00000345009 A6NDX4 124 aa9.51□□□□□ -0.89
SNCA-202ENST00000345009 PMP2P02689 132 aa9.51□□□□□ -0.89
SNCA-202ENST00000345009 HLA-DMAP28067 261 aa9.51□□□□□ -0.89
SNCA-202ENST00000345009 TAS2R19P59542 299 aa9.51□□□□□ -0.89
SNCA-202ENST00000345009 HERV-K104P61576 105 aa9.51□□□□□ -0.89
SNCA-202ENST00000345009 FOXL1Q12952 345 aa9.51□□□□□ -0.89
SNCA-202ENST00000345009 DYRK1AQ13627 763 aa9.51□□□□□ -0.89
SNCA-202ENST00000345009 HABP2Q14520 560 aaPredicted RBP9.51□□□□□ -0.89
SNCA-202ENST00000345009 DHRS11Q6UWP2 260 aa9.51□□□□□ -0.89
SNCA-202ENST00000345009 OVCH2Q7RTZ1 564 aa9.51□□□□□ -0.89
SNCA-202ENST00000345009 SMIM4Q8WVI0 70 aa9.51□□□□□ -0.89
SNCA-202ENST00000345009 SNAPC3Q92966 411 aa9.51□□□□□ -0.89
SNCA-202ENST00000345009 PARP12Q9H0J9 701 aaKnown RBP9.51□□□□□ -0.89
SNCA-202ENST00000345009 OR2D2Q9H210 308 aa9.51□□□□□ -0.89
SNCA-202ENST00000345009 C1RLQ9NZP8 487 aa9.51□□□□□ -0.89
SNCA-202ENST00000345009 KLK11Q9UBX7 282 aa9.51□□□□□ -0.89
SNCA-202ENST00000345009 FBN1P35555 2871 aaKnown RBP9.5□□□□□ -0.89
SNCA-202ENST00000345009 A0A1B0GUS0 222 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 OR5H14A6NHG9 310 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 FAM90A9PA6NNJ1 464 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 M0R1X1 148 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 GSTZ1O43708 216 aaPredicted RBP9.5□□□□□ -0.89
SNCA-202ENST00000345009 TUSC2O75896 110 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 MOSP00540 346 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 APOA2P02652 100 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 SNRNP70P08621 437 aaKnown RBP9.5□□□□□ -0.89
SNCA-202ENST00000345009 CSF1P09603 554 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 TMEM11P17152 192 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 S100GP29377 79 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 HRH1P35367 487 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 RFX2P48378 723 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 SRSF2Q01130 221 aaKnown RBP9.5□□□□□ -0.89
SNCA-202ENST00000345009 CBX3Q13185 183 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 DIAPH2-AS1Q14236 149 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 PYDC2Q56P42 97 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 RNASE12Q5GAN4 147 aaKnown RBP9.5□□□□□ -0.89
SNCA-202ENST00000345009 RNASE10Q5GAN6 216 aaKnown RBP9.5□□□□□ -0.89
SNCA-202ENST00000345009 FOXB2Q5VYV0 432 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 LPCAT3Q6P1A2 487 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 LYSMD2Q8IV50 215 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 ODF3L1Q8IXM7 274 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 ZNF645Q8N7E2 425 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 OR8H1Q8NGG4 311 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 OR4C13Q8NGP0 309 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 OR6Q1Q8NGQ2 317 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 OR4F5Q8NH21 305 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 CFHR4Q92496 578 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 ADTRPQ96IZ2 230 aa9.5□□□□□ -0.89
SNCA-202ENST00000345009 RBM14Q96PK6 669 aaKnown RBP9.5□□□□□ -0.89
SNCA-202ENST00000345009 NCBP2LA6PVI3 153 aaKnown RBP9.49□□□□□ -0.89
SNCA-202ENST00000345009 H7C2Y5 167 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 J3QRK9 145 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 OR2F2O95006 317 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 PPYP01298 95 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 IGKV1D-33P01593 117 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 IGKV1-33P01594 117 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 RPLP1P05386 114 aaKnown RBP9.49□□□□□ -0.89
SNCA-202ENST00000345009 HKR1P10072 659 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 RRASP10301 218 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 CD24P25063 80 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 ETV6P41212 452 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 AP3S2P59780 193 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 DGCR2P98153 550 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 LSAMPQ13449 338 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 EBI3Q14213 229 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 HNF4GQ14541 408 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 MEF2DQ14814 521 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 MSMO1Q15800 293 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 KRTAP24-1Q3LI83 254 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 RPL39P5Q59GN2 51 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 VAX1Q5SQQ9 334 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 LINC00299Q6ZSB3 139 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 TMEM219Q86XT9 240 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 TMEM229BQ8NBD8 167 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms