RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 KALRNO60229 2985 aa16.52■□□□□ 0.24
RTN1-202ENST00000342503 SMG1Q96Q15 3661 aaKnown RBP16.52■□□□□ 0.24
RTN1-202ENST00000342503 FAM24AA6NFZ4 105 aa16.52■□□□□ 0.24
RTN1-202ENST00000342503 KIAA1324LA8MWY0 1029 aaPredicted RBP16.52■□□□□ 0.24
RTN1-202ENST00000342503 B8ZZF3 427 aa16.52■□□□□ 0.24
RTN1-202ENST00000342503 SLC31A2O15432 143 aa16.52■□□□□ 0.24
RTN1-202ENST00000342503 FCN3O75636 299 aa16.52■□□□□ 0.24
RTN1-202ENST00000342503 GNLYP22749 145 aa16.52■□□□□ 0.24
RTN1-202ENST00000342503 LINC00205P59089 165 aa16.52■□□□□ 0.24
RTN1-202ENST00000342503 VAMP2P63027 116 aa16.52■□□□□ 0.24
RTN1-202ENST00000342503 OR2C3Q8N628 320 aa16.52■□□□□ 0.24
RTN1-202ENST00000342503 IFI27L2Q9H2X8 130 aa16.52■□□□□ 0.24
RTN1-202ENST00000342503 hADV38S2A0JD32 116 aa16.51■□□□□ 0.23
RTN1-202ENST00000342503 CHST1O43916 411 aa16.51■□□□□ 0.23
RTN1-202ENST00000342503 PROP1O75360 226 aa16.51■□□□□ 0.23
RTN1-202ENST00000342503 MMP9P14780 707 aa16.51■□□□□ 0.23
RTN1-202ENST00000342503 EIF5AP63241 154 aaKnown RBP16.51■□□□□ 0.23
RTN1-202ENST00000342503 NHLH2Q02577 135 aa16.51■□□□□ 0.23
RTN1-202ENST00000342503 C4orf17Q53FE4 359 aa16.51■□□□□ 0.23
RTN1-202ENST00000342503 TCTEX1D1Q8N7M0 179 aa16.51■□□□□ 0.23
RTN1-202ENST00000342503 LINC00574Q9H8X3 128 aa16.51■□□□□ 0.23
RTN1-202ENST00000342503 FAM212BQ9NTI7 297 aaPredicted RBP16.51■□□□□ 0.23
RTN1-202ENST00000342503 MED9Q9NWA0 146 aa16.51■□□□□ 0.23
RTN1-202ENST00000342503 PKDREJQ9NTG1 2253 aa16.51■□□□□ 0.23
RTN1-202ENST00000342503 WRBO00258 174 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 ITGB1BP1O14713 200 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 S1PR2O95136 353 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 GAPDHP04406 335 aaKnown RBP16.5■□□□□ 0.23
RTN1-202ENST00000342503 EWSR1Q01844 656 aaKnown RBP eCLIP16.5■□□□□ 0.23
RTN1-202ENST00000342503 TMED6Q8WW62 240 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 WFDC1Q9HC57 220 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 C19orf12Q9NSK7 152 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 MMP24Q9Y5R2 645 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 IGSF23A1L1A6 192 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 TMEM50AO95807 157 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 NFYBP25208 207 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 DUTP33316 252 aaKnown RBP16.5■□□□□ 0.23
RTN1-202ENST00000342503 G6PCP35575 357 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 CAV2P51636 162 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 AANATQ16613 207 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 RPL39P5Q59GN2 51 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 CT45A1Q5HYN5 189 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 CT45A3Q8NHU0 189 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 ABHD14AQ9BUJ0 271 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 REG4Q9BYZ8 158 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 LYRM2Q9NU23 88 aaPredicted RBP16.5■□□□□ 0.23
RTN1-202ENST00000342503 PFDN2Q9UHV9 154 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 LINC00312Q9Y6C7 94 aa16.5■□□□□ 0.23
RTN1-202ENST00000342503 YLPM1P49750 1951 aaKnown RBP16.5■□□□□ 0.23
RTN1-202ENST00000342503 A0A1W2PPE3 182 aa16.49■□□□□ 0.23
RTN1-202ENST00000342503 NDUFB3O43676 98 aa16.49■□□□□ 0.23
RTN1-202ENST00000342503 ZG16O60844 167 aa16.49■□□□□ 0.23
RTN1-202ENST00000342503 MMP23AO75900 390 aa16.49■□□□□ 0.23
RTN1-202ENST00000342503 JTBO76095 146 aa16.49■□□□□ 0.23
RTN1-202ENST00000342503 RAB7AP51149 207 aa16.49■□□□□ 0.23
RTN1-202ENST00000342503 PAX9P55771 341 aa16.49■□□□□ 0.23
RTN1-202ENST00000342503 MEF2CQ06413 473 aaPredicted RBP16.49■□□□□ 0.23
RTN1-202ENST00000342503 ZNF273Q14593 569 aa16.49■□□□□ 0.23
RTN1-202ENST00000342503 HFEQ30201 348 aa16.49■□□□□ 0.23
RTN1-202ENST00000342503 PRAMEF5Q5TYX0 476 aa16.49■□□□□ 0.23
RTN1-202ENST00000342503 NCR3LG1Q68D85 454 aa16.49■□□□□ 0.23
RTN1-202ENST00000342503 TAS2R3Q9NYW6 316 aa16.49■□□□□ 0.23
RTN1-202ENST00000342503 CTSZQ9UBR2 303 aa16.49■□□□□ 0.23
RTN1-202ENST00000342503 USF3Q68DE3 2245 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 LYNX1G3V0Z9 82 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 M0R1X1 148 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 KRASP01116 189 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 P0C879 139 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 LYNX1P0DP58 116 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 COL8A2P25067 703 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 PLA2G5P39877 138 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 PPOXP50336 477 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 RPL31P62899 125 aaKnown RBP16.48■□□□□ 0.23
RTN1-202ENST00000342503 SLC25A31Q9H0C2 315 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 GAB2Q9UQC2 676 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 NBASA2RRP1 2371 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 RELNP78509 3460 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 TEX46H3BTG2 121 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 FGF16O43320 207 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 ATG12O94817 140 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 TMEM30BQ3MIR4 351 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 LRRC10Q5BKY1 277 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 C1orf229Q6ZS94 237 aaPredicted RBP16.48■□□□□ 0.23
RTN1-202ENST00000342503 ODF3L1Q8IXM7 274 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 TMEM252Q8N6L7 170 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 ZNF439Q8NDP4 499 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 ITLN2Q8WWU7 325 aaPredicted RBP16.48■□□□□ 0.23
RTN1-202ENST00000342503 BARX1Q9HBU1 254 aaPredicted RBP16.48■□□□□ 0.23
RTN1-202ENST00000342503 KAAG1Q9UBP8 84 aa16.48■□□□□ 0.23
RTN1-202ENST00000342503 MFSD2BA6NFX1 497 aa16.47■□□□□ 0.23
RTN1-202ENST00000342503 ZNF295-AS1Q8N0V1 137 aa16.47■□□□□ 0.23
RTN1-202ENST00000342503 UBAC2Q8NBM4 344 aa16.47■□□□□ 0.23
RTN1-202ENST00000342503 H1FXQ92522 213 aaKnown RBP16.47■□□□□ 0.23
RTN1-202ENST00000342503 GAL3ST2Q9H3Q3 398 aa16.47■□□□□ 0.23
RTN1-202ENST00000342503 COA4Q9NYJ1 87 aa16.47■□□□□ 0.23
RTN1-202ENST00000342503 RPUSD1Q9UJJ7 312 aaKnown RBP16.47■□□□□ 0.23
RTN1-202ENST00000342503 BORCS7-ASMTA0A0B4J1R7 106 aa16.46■□□□□ 0.23
RTN1-202ENST00000342503 DVL1O14640 695 aa16.46■□□□□ 0.23
RTN1-202ENST00000342503 FAM157CP0CG43 387 aa16.46■□□□□ 0.23
RTN1-202ENST00000342503 GNG10P50151 68 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms