RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 DYNLRB1Q9NP97 96 aa11.04□□□□□ -0.64
COL18A1-201ENST00000342220 ZNF391Q9UJN7 358 aa11.04□□□□□ -0.64
COL18A1-201ENST00000342220 ABCA1O95477 2261 aa11.04□□□□□ -0.64
COL18A1-201ENST00000342220 USP9XQ93008 2570 aaPredicted RBP11.04□□□□□ -0.64
COL18A1-201ENST00000342220 HSD17B6O14756 317 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 CNOT4O95628 575 aaKnown RBP11.03□□□□□ -0.64
COL18A1-201ENST00000342220 SCTP09683 121 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 HNF1AP20823 631 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 KLF3P57682 345 aaPredicted RBP11.03□□□□□ -0.64
COL18A1-201ENST00000342220 BSPH1Q075Z2 132 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 ARL6IP1Q15041 203 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 COLCA1Q6ZS62 124 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 OR5A2Q8NGI9 324 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 CCL17Q92583 94 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 OR2V2Q96R30 315 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 FAM234AQ9H0X4 552 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 TUBD1Q9UJT1 453 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 FAM157AC9JC47 383 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 CA11O75493 328 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 LINC00614P0C842 121 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 PAX1P15863 534 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 CEBPGP53567 150 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 AESQ08117 197 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 KLRB1Q12918 225 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 MSMPQ1L6U9 139 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 FAM53AQ6NSI3 398 aaPredicted RBP11.03□□□□□ -0.64
COL18A1-201ENST00000342220 TGIF2LYQ8IUE0 185 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 OR5R1Q8NH85 324 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 PARP11Q9NR21 331 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 SLC25A15Q9Y619 301 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 TGOLN2O43493 480 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 DIRAS3O95661 229 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 TSPAN15O95858 294 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 OR5AC1P0C628 307 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 NRN1LQ496H8 165 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 WDR86Q86TI4 376 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 DCTN5Q9BTE1 182 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 GP6Q9HCN6 339 aa11.03□□□□□ -0.64
COL18A1-201ENST00000342220 CYB5BO43169 146 aa11.02□□□□□ -0.64
COL18A1-201ENST00000342220 MLNRO43193 412 aa11.02□□□□□ -0.64
COL18A1-201ENST00000342220 JTBO76095 146 aa11.02□□□□□ -0.64
COL18A1-201ENST00000342220 MBPP02686 304 aaPredicted RBP11.02□□□□□ -0.64
COL18A1-201ENST00000342220 UQCRFS1P47985 274 aa11.02□□□□□ -0.64
COL18A1-201ENST00000342220 TMEM108Q6UXF1 575 aa11.02□□□□□ -0.64
COL18A1-201ENST00000342220 SUMF2Q8NBJ7 301 aa11.02□□□□□ -0.64
COL18A1-201ENST00000342220 OR11L1Q8NGX0 322 aa11.02□□□□□ -0.64
COL18A1-201ENST00000342220 ITLN1Q8WWA0 313 aa11.02□□□□□ -0.64
COL18A1-201ENST00000342220 SFXN3Q9BWM7 321 aa11.02□□□□□ -0.64
COL18A1-201ENST00000342220 MPC1Q9Y5U8 109 aa11.02□□□□□ -0.64
COL18A1-201ENST00000342220 USP24Q9UPU5 2620 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 ELOA3CA0A087WX78 387 aaPredicted RBP11.02□□□□□ -0.65
COL18A1-201ENST00000342220 CGAP01215 116 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 PRB1P04280 392 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 RAC2P15153 192 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 ECI1P42126 302 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 ZNF616Q08AN1 781 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 Q6ZSR3 168 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 LYZL2Q7Z4W2 148 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 OR51H1Q8NH63 302 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 WFIKKN1Q96NZ8 548 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 HIST1H2BLQ99880 126 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 ZNF286AQ9HBT8 521 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 KCNJ16Q9NPI9 418 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 TLN2Q9Y4G6 2542 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 ZG16O60844 167 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 CXCL1P09341 107 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 ZNF728P0DKX0 622 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 GZMBP10144 247 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 RHEBQ15382 184 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 BATFQ16520 125 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 DNLZQ5SXM8 178 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 NCR3LG1Q68D85 454 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 SVIPQ8NHG7 77 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 C22orf15Q8WYQ4 148 aa11.02□□□□□ -0.65
COL18A1-201ENST00000342220 CYB5R3P00387 301 aaPredicted RBP11.01□□□□□ -0.65
COL18A1-201ENST00000342220 IGKV3-15P01624 115 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 GAPDHP04406 335 aaKnown RBP11.01□□□□□ -0.65
COL18A1-201ENST00000342220 RPLP1P05386 114 aaKnown RBP11.01□□□□□ -0.65
COL18A1-201ENST00000342220 CD40P25942 277 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 CHATP28329 748 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 RPL29P47914 159 aaKnown RBP11.01□□□□□ -0.65
COL18A1-201ENST00000342220 PRB3Q04118 309 aaPredicted RBP11.01□□□□□ -0.65
COL18A1-201ENST00000342220 TMEM187Q14656 261 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 TIMM23BQ5SRD1 257 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 OR10V1Q8NGI7 309 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 RTN4IP1Q8WWV3 396 aaPredicted RBP11.01□□□□□ -0.65
COL18A1-201ENST00000342220 C10orf35Q96D05 121 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 WFDC1Q9HC57 220 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 DECR2Q9NUI1 292 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 NECAP2Q9NVZ3 263 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 FBXO7Q9Y3I1 522 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 FASNP49327 2511 aaKnown RBP11.01□□□□□ -0.65
COL18A1-201ENST00000342220 MALRD1Q5VYJ5 2156 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 TRGC1P0CF51 173 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 COX5AP20674 150 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 S100A7P31151 101 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 TIMP3P35625 211 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 FHITP49789 147 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 GUK1Q16774 197 aa11.01□□□□□ -0.65
COL18A1-201ENST00000342220 Q6ZR03 302 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms