RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 NPIPB7O75200 414 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 TNFSF15O95150 251 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 GYPAP02724 150 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 CD99P14209 185 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 ACKR1Q16570 336 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 FAM180AQ6UWF9 173 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 TCTEX1D1Q8N7M0 179 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 MSI2Q96DH6 328 aaKnown RBP10.1□□□□□ -0.79
RTN3-203ENST00000341307 SPACA5Q96QH8 159 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 NAA60Q9H7X0 242 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 PSG11Q9UQ72 335 aa10.1□□□□□ -0.79
RTN3-203ENST00000341307 PTRH2Q9Y3E5 179 aaKnown RBP10.1□□□□□ -0.79
RTN3-203ENST00000341307 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 P2RY10O00398 339 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 TNFSF12O43508 249 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 ISG15P05161 165 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 C17orf67Q0P5P2 114 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 IL11RAQ14626 422 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 LIAT1Q6ZQX7 453 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 C1orf122Q6ZSJ8 110 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 OR10W1Q8NGF6 305 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 TM2D1Q9BX74 207 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 ZDHHC11Q9H8X9 412 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 DECR2Q9NUI1 292 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 ZFAND5O76080 213 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 HLA-HP01893 362 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 CRISP2P16562 243 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 CRYBA4P53673 196 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 PPP1CBP62140 327 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 PSG9Q00887 426 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 SLC18B1Q6NT16 456 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 GLIPR1L1Q6UWM5 242 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 SIGLECL1Q8N7X8 197 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 ADAT3Q96EY9 351 aaPredicted RBP10.09□□□□□ -0.79
RTN3-203ENST00000341307 ATP6V0BQ99437 205 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 DEFB126Q9BYW3 111 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 NRN1Q9NPD7 142 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 TBL2Q9Y4P3 447 aaKnown RBP10.09□□□□□ -0.79
RTN3-203ENST00000341307 B3GALT1Q9Y5Z6 326 aa10.09□□□□□ -0.79
RTN3-203ENST00000341307 TRAV26-1A0A087WT03 109 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 EFNA2O43921 213 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 ZNF253O75346 499 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 KLF7O75840 302 aaPredicted RBP10.08□□□□□ -0.8
RTN3-203ENST00000341307 TMEM50AO95807 157 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 HLA-DQA2P01906 255 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 SCGB1A1P11684 91 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 KITLGP21583 273 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 PTGDSP41222 190 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 MEF2BQ02080 365 aaPredicted RBP10.08□□□□□ -0.8
RTN3-203ENST00000341307 ZNF154Q13106 437 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 PCOLCEQ15113 449 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 PSG3Q16557 428 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 SGCBQ16585 318 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 ATOH7Q8N100 152 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 BATF2Q8N1L9 274 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 ZC2HC1AQ96GY0 325 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 METTL7AQ9H8H3 244 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 R4GMQ9 66 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 SSSCA1O60232 199 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 ZNF737O75373 536 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 CEACAM3P40198 252 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 ECI1P42126 302 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 RPS18P62269 152 aaKnown RBP10.08□□□□□ -0.8
RTN3-203ENST00000341307 PLPPR5Q32ZL2 321 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 ABHD12BQ7Z5M8 362 aaPredicted RBP10.08□□□□□ -0.8
RTN3-203ENST00000341307 OR1B1Q8NGR6 318 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 C19orf25Q9UFG5 118 aaPredicted RBP10.08□□□□□ -0.8
RTN3-203ENST00000341307 DOCK11Q5JSL3 2073 aa10.08□□□□□ -0.8
RTN3-203ENST00000341307 TRAV8-6A0A0B4J262 113 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 PLPP3O14495 311 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 RENP00797 406 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 MT-ATP6P00846 226 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 IGLC1P0CG04 106 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 CTSSP25774 331 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 MPV17L2Q567V2 206 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 VASH2Q86V25 355 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 BAGE3Q86Y29 109 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 BAGE2Q86Y30 109 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 RTN4IP1Q8WWV3 396 aaPredicted RBP10.07□□□□□ -0.8
RTN3-203ENST00000341307 NEUROG1Q92886 237 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 PECRQ9BY49 303 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 TP73-AS1Q9UF72 201 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 MED12Q93074 2177 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 IGHV1-45A0A0A0MS14 117 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 RAB29O14966 203 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 SLC16A7O60669 478 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 DXOO77932 396 aaKnown RBP10.07□□□□□ -0.8
RTN3-203ENST00000341307 C3orf79P0CE67 100 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 ZNF133P52736 654 aaPredicted RBP10.07□□□□□ -0.8
RTN3-203ENST00000341307 RPL27P61353 136 aaKnown RBP10.07□□□□□ -0.8
RTN3-203ENST00000341307 ZP4Q12836 540 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 EMC4Q5J8M3 183 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 DEFB125Q8N687 156 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 C5orf17Q8NAS9 161 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 TMEM59Q9BXS4 323 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 ABI3Q9P2A4 366 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 EML6Q6ZMW3 1958 aa10.07□□□□□ -0.8
RTN3-203ENST00000341307 NKX2-6A6NCS4 301 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 DPRXA6NFQ7 191 aa10.06□□□□□ -0.8
RTN3-203ENST00000341307 TMEM250H0YL14 139 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms