RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 CYCSP99999 105 aaKnown RBP14.25□□□□□ -0.13
CLDN4-201ENST00000340958 RNASE11Q8TAA1 199 aaKnown RBP14.25□□□□□ -0.13
CLDN4-201ENST00000340958 C17orf50Q8WW18 174 aa14.25□□□□□ -0.13
CLDN4-201ENST00000340958 TCTEX1D2Q8WW35 142 aa14.25□□□□□ -0.13
CLDN4-201ENST00000340958 MSI2Q96DH6 328 aaKnown RBP14.25□□□□□ -0.13
CLDN4-201ENST00000340958 HYLS1Q96M11 299 aa14.25□□□□□ -0.13
CLDN4-201ENST00000340958 GSKIPQ9P0R6 139 aa14.25□□□□□ -0.13
CLDN4-201ENST00000340958 PIGBOS1A0A0B4J2F0 54 aa14.25□□□□□ -0.13
CLDN4-201ENST00000340958 SLC31A2O15432 143 aa14.25□□□□□ -0.13
CLDN4-201ENST00000340958 MSMO1Q15800 293 aa14.25□□□□□ -0.13
CLDN4-201ENST00000340958 LRRC37A5PQ49AS3 106 aa14.25□□□□□ -0.13
CLDN4-201ENST00000340958 CT45A1Q5HYN5 189 aa14.25□□□□□ -0.13
CLDN4-201ENST00000340958 GGNBP1Q5YKI7 109 aa14.25□□□□□ -0.13
CLDN4-201ENST00000340958 CT45A3Q8NHU0 189 aa14.25□□□□□ -0.13
CLDN4-201ENST00000340958 WDR89Q96FK6 387 aaPredicted RBP14.25□□□□□ -0.13
CLDN4-201ENST00000340958 HSD17B10Q99714 261 aaKnown RBP14.25□□□□□ -0.13
CLDN4-201ENST00000340958 YLPM1P49750 1951 aaKnown RBP14.24□□□□□ -0.13
CLDN4-201ENST00000340958 M0R1X1 148 aa14.24□□□□□ -0.13
CLDN4-201ENST00000340958 ITGB1BP1O14713 200 aa14.24□□□□□ -0.13
CLDN4-201ENST00000340958 RAB29O14966 203 aa14.24□□□□□ -0.13
CLDN4-201ENST00000340958 LIPFP07098 398 aa14.24□□□□□ -0.13
CLDN4-201ENST00000340958 FGL1Q08830 312 aa14.24□□□□□ -0.13
CLDN4-201ENST00000340958 OR2B11Q5JQS5 317 aa14.24□□□□□ -0.13
CLDN4-201ENST00000340958 UTF1Q5T230 341 aa14.24□□□□□ -0.13
CLDN4-201ENST00000340958 LYZL2Q7Z4W2 148 aa14.24□□□□□ -0.13
CLDN4-201ENST00000340958 LRTM2Q8N967 370 aa14.24□□□□□ -0.13
CLDN4-201ENST00000340958 IFI27L2Q9H2X8 130 aa14.24□□□□□ -0.13
CLDN4-201ENST00000340958 IGHV1-8P0DP01 117 aa14.23□□□□□ -0.13
CLDN4-201ENST00000340958 UCP1P25874 307 aa14.23□□□□□ -0.13
CLDN4-201ENST00000340958 IAH1Q2TAA2 248 aaPredicted RBP14.23□□□□□ -0.13
CLDN4-201ENST00000340958 RPL39P5Q59GN2 51 aa14.23□□□□□ -0.13
CLDN4-201ENST00000340958 ZNF66Q6ZN08 573 aa14.23□□□□□ -0.13
CLDN4-201ENST00000340958 SLC35G3Q8N808 338 aa14.23□□□□□ -0.13
CLDN4-201ENST00000340958 C18orf12Q96KH6 178 aa14.23□□□□□ -0.13
CLDN4-201ENST00000340958 TMEM56Q96MV1 263 aa14.23□□□□□ -0.13
CLDN4-201ENST00000340958 TMEM56-RWDD3S4R434 201 aa14.23□□□□□ -0.13
CLDN4-201ENST00000340958 VPS13CQ709C8 3753 aa14.23□□□□□ -0.13
CLDN4-201ENST00000340958 DSCAML1Q8TD84 2053 aa14.23□□□□□ -0.13
CLDN4-201ENST00000340958 MPTX1A8MV57 137 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 F5H0A9 414 aaPredicted RBP14.22□□□□□ -0.13
CLDN4-201ENST00000340958 TOR1AO14656 332 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 CDS2O95674 445 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 SELENOHQ8IZQ5 122 aaKnown RBP14.22□□□□□ -0.13
CLDN4-201ENST00000340958 OR10X1Q8NGY0 326 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 LHFPL5Q8TAF8 219 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 RBPMSQ93062 196 aaKnown RBP14.22□□□□□ -0.13
CLDN4-201ENST00000340958 C2orf50Q96LR7 162 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 TMED3Q9Y3Q3 217 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 SESN1Q9Y6P5 492 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 MAP1AP78559 2803 aaPredicted RBP14.22□□□□□ -0.13
CLDN4-201ENST00000340958 C22orf46C9J442 243 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 IGHV2-5P01817 119 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 HTR2BP41595 481 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 DLX6P56179 175 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 ZNF767PQ75MW2 155 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 C8orf46Q8TAG6 207 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 OR10C1Q96KK4 312 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 S1PR3Q99500 378 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 NMES1Q9C002 83 aa14.22□□□□□ -0.13
CLDN4-201ENST00000340958 FXYD6-FXYD2A0A087WZ82 144 aa14.21□□□□□ -0.13
CLDN4-201ENST00000340958 SAA2-SAA4A0A096LPE2 208 aa14.21□□□□□ -0.13
CLDN4-201ENST00000340958 C17orf98A8MV24 154 aa14.21□□□□□ -0.13
CLDN4-201ENST00000340958 NDUFS8O00217 210 aa14.21□□□□□ -0.13
CLDN4-201ENST00000340958 SAA2P0DJI9 122 aaPredicted RBP14.21□□□□□ -0.13
CLDN4-201ENST00000340958 SLC25A48Q6ZT89 311 aaKnown RBP14.21□□□□□ -0.13
CLDN4-201ENST00000340958 SPAG16Q8N0X2 631 aa14.21□□□□□ -0.13
CLDN4-201ENST00000340958 ABHD12Q8N2K0 398 aa14.21□□□□□ -0.13
CLDN4-201ENST00000340958 ZNF439Q8NDP4 499 aa14.21□□□□□ -0.13
CLDN4-201ENST00000340958 CLDND2Q8NHS1 167 aa14.21□□□□□ -0.13
CLDN4-201ENST00000340958 PPP1R1CQ8WVI7 109 aa14.21□□□□□ -0.13
CLDN4-201ENST00000340958 C5orf30Q96GV9 206 aa14.21□□□□□ -0.13
CLDN4-201ENST00000340958 TMEM133Q9H2Q1 129 aa14.21□□□□□ -0.13
CLDN4-201ENST00000340958 PRELID3BQ9Y3B1 194 aa14.21□□□□□ -0.13
CLDN4-201ENST00000340958 CELSR1Q9NYQ6 3014 aa14.21□□□□□ -0.13
CLDN4-201ENST00000340958 SCGB1D2O95969 90 aa14.2□□□□□ -0.14
CLDN4-201ENST00000340958 AKR1C2P52895 323 aa14.2□□□□□ -0.14
CLDN4-201ENST00000340958 S100A10P60903 97 aa14.2□□□□□ -0.14
CLDN4-201ENST00000340958 ZNF816Q0VGE8 651 aaPredicted RBP14.2□□□□□ -0.14
CLDN4-201ENST00000340958 C9orf62Q8N4C0 152 aa14.2□□□□□ -0.14
CLDN4-201ENST00000340958 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.2□□□□□ -0.14
CLDN4-201ENST00000340958 THAP6Q8TBB0 222 aa14.2□□□□□ -0.14
CLDN4-201ENST00000340958 IL22RA2Q969J5 263 aa14.2□□□□□ -0.14
CLDN4-201ENST00000340958 DUXBA0A1W2PPF3 345 aa14.2□□□□□ -0.14
CLDN4-201ENST00000340958 DUTP33316 252 aaKnown RBP14.2□□□□□ -0.14
CLDN4-201ENST00000340958 LPAR6P43657 344 aa14.2□□□□□ -0.14
CLDN4-201ENST00000340958 ARF6P62330 175 aa14.2□□□□□ -0.14
CLDN4-201ENST00000340958 RPL30P62888 115 aaKnown RBP14.2□□□□□ -0.14
CLDN4-201ENST00000340958 LCN2P80188 198 aa14.2□□□□□ -0.14
CLDN4-201ENST00000340958 SRSF4Q08170 494 aaKnown RBP14.2□□□□□ -0.14
CLDN4-201ENST00000340958 LY6G5BQ8NDX9 201 aa14.2□□□□□ -0.14
CLDN4-201ENST00000340958 OR9G1Q8NH87 305 aa14.2□□□□□ -0.14
CLDN4-201ENST00000340958 RRNAD1Q96FB5 475 aaKnown RBP14.2□□□□□ -0.14
CLDN4-201ENST00000340958 SPIN2AQ99865 258 aa14.2□□□□□ -0.14
CLDN4-201ENST00000340958 SPIN2BQ9BPZ2 258 aa14.2□□□□□ -0.14
CLDN4-201ENST00000340958 GAB2Q9UQC2 676 aa14.2□□□□□ -0.14
CLDN4-201ENST00000340958 J3QR06 171 aa14.19□□□□□ -0.14
CLDN4-201ENST00000340958 ATG12O94817 140 aa14.19□□□□□ -0.14
CLDN4-201ENST00000340958 VDAC1P21796 283 aa14.19□□□□□ -0.14
CLDN4-201ENST00000340958 PSMB6P28072 239 aa14.19□□□□□ -0.14
CLDN4-201ENST00000340958 PRRX1P54821 245 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms