RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.39□□□□□ -1.39
TMC1-202ENST00000340019 OR9G1Q8NH87 305 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 GLYATL2Q8WU03 294 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 TNFRSF14Q92956 283 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 NEURL2Q9BR09 285 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 MED28Q9H204 178 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 PIPOXQ9P0Z9 390 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 ZFHX3Q15911 3703 aa6.39□□□□□ -1.39
TMC1-202ENST00000340019 A0A0B4J2A0 478 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 SSNA1O43805 119 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 IGLV1-47P01700 117 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 CXCL3P19876 107 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 S100GP29377 79 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 ZNF137PP52743 207 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 LOXL1Q08397 574 aaPredicted RBP6.38□□□□□ -1.39
TMC1-202ENST00000340019 HCP5Q6MZN7 132 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 CASTOR1Q8WTX7 329 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 MSI2Q96DH6 328 aaKnown RBP6.38□□□□□ -1.39
TMC1-202ENST00000340019 PHB2Q99623 299 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 PRR13Q9NZ81 148 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 SHPKQ9UHJ6 478 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 KCNIP3Q9Y2W7 256 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 INSIG2Q9Y5U4 225 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 H0Y980 276 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 PFDN1O60925 122 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 B3GALNT1O75752 331 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 DUTP33316 252 aaKnown RBP6.38□□□□□ -1.39
TMC1-202ENST00000340019 DVL1P1P54792 670 aaPredicted RBP6.38□□□□□ -1.39
TMC1-202ENST00000340019 RPL30P62888 115 aaKnown RBP6.38□□□□□ -1.39
TMC1-202ENST00000340019 C2orf68Q2NKX9 166 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 SP6Q3SY56 376 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 RPL39P5Q59GN2 51 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 C11orf88Q6PI97 169 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 BTNL3Q6UXE8 466 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 ZNF66Q6ZN08 573 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 ZNF833PQ6ZTB9 187 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 LYG1Q8N1E2 194 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 LRTM2Q8N967 370 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 BEND2Q8NDZ0 799 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 OR11H6Q8NGC7 330 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 ST6GALNAC6Q969X2 333 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 TMEM222Q9H0R3 208 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 SIRT7Q9NRC8 400 aa6.38□□□□□ -1.39
TMC1-202ENST00000340019 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.37□□□□□ -1.39
TMC1-202ENST00000340019 LINC00473A8K010 186 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 ANXA3P12429 323 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 HLA-GP17693 338 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 UCP1P25874 307 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 BRWD1-AS2P59051 145 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 LINC00205P59089 165 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 PRB3Q04118 309 aaPredicted RBP6.37□□□□□ -1.39
TMC1-202ENST00000340019 PAX8Q06710 450 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 VMO1Q7Z5L0 202 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 COQ8AQ8NI60 647 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 TMEM56Q96MV1 263 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 HSD17B10Q99714 261 aaKnown RBP6.37□□□□□ -1.39
TMC1-202ENST00000340019 FOXC2Q99958 501 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 CLEC7AQ9BXN2 247 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 LPAR2Q9HBW0 351 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 TMEM56-RWDD3S4R434 201 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 CDS2O95674 445 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 MSMBP08118 114 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 HLA-DRB5Q30154 266 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 LIN54Q6MZP7 749 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 FAM71F2Q6NXP2 309 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 LIAT1Q6ZQX7 453 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 OR13D1Q8NGV5 346 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 OR51H1Q8NH63 302 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 LHFPL5Q8TAF8 219 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 Q96MF0 132 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 TBX15Q96SF7 602 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 REG4Q9BYZ8 158 aa6.37□□□□□ -1.39
TMC1-202ENST00000340019 LIN7CQ9NUP9 197 aaKnown RBP6.37□□□□□ -1.39
TMC1-202ENST00000340019 RNF212BA8MTL3 300 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 ODF3BA8MYP8 253 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 B4DSR2 109 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 RNF223E7ERA6 249 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 ZNF585BQ52M93 769 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 UXS1Q8NBZ7 420 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 OR4P4Q8NGL7 312 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 OR10X1Q8NGY0 326 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 DDB2Q92466 427 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 ST6GAL2Q96JF0 529 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 C18orf12Q96KH6 178 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 RNASEK-C17orf49H0YIS7 233 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 BUB1B-PAK6H3BSN5 160 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 M0R1X1 148 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 TOX4O94842 621 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 HOXB4P17483 251 aaPredicted RBP6.36□□□□□ -1.39
TMC1-202ENST00000340019 COX7A1P24310 79 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 PRRX1P54821 245 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 H2BFSP57053 126 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 CD300CQ08708 224 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 AKAP14Q86UN6 197 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 PNKDQ8N490 385 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 TMEM186Q96B77 213 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 HEXA-AS1Q9H8Q6 139 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 RAB18Q9NP72 206 aa6.36□□□□□ -1.39
TMC1-202ENST00000340019 FAM212BQ9NTI7 297 aaPredicted RBP6.36□□□□□ -1.39
TMC1-202ENST00000340019 MGAT4CQ9UBM8 478 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms