RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 A0A0G2JMM0 328 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 A0A1W2PPB8 328 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 LRP5LA4QPB2 252 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 KIR3DP1A8MWS1 328 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 C11orf94C9JXX5 98 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 H0YJW9 148 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 SRSF10O75494 262 aaKnown RBP8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 APOA2P02652 100 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 ADH4P08319 380 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 SCGB1A1P11684 91 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 IGFBP2P18065 325 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 ACP7Q6ZNF0 438 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 ZNF695Q8IW36 515 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 ZDHHC23Q8IYP9 409 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 OR5AS1Q8N127 324 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 TMEM52Q8NDY8 209 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 SLC25A40Q8TBP6 338 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 RNF183Q96D59 192 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 NEIL1Q96FI4 390 aaPredicted RBP8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 AP1S3Q96PC3 154 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 MMP25Q9NPA2 562 aa8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 PNRC2Q9NPJ4 139 aaKnown RBP8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 UBE2J1Q9Y385 318 aaPredicted RBP8.21□□□□□ -1.09
PTCHD4-201ENST00000339488 TRBV7-9A0A0J9YWB2 115 aa8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 SLC22A20A6NK97 555 aa8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 C17orf112F2Z3M2 114 aa8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 HRKO00198 91 aa8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 CD5LO43866 347 aa8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 EGR4Q05215 589 aa8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 PSG7Q13046 419 aa8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 ACSM6Q6P461 480 aa8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 SLC23A3Q6PIS1 610 aa8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 MTURNQ8N3F0 131 aa8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 OR4C3Q8NH37 302 aa8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 RNF133Q8WVZ7 376 aa8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 GPX7Q96SL4 187 aaPredicted RBP8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 QTRT1Q9BXR0 403 aaKnown RBP8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 HEATR1Q9H583 2144 aaKnown RBP8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 MBNL3Q9NUK0 354 aaKnown RBP8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 B4GALT7Q9UBV7 327 aa8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 COPS7AQ9UBW8 275 aa8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 ANXA10Q9UJ72 324 aa8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 PCDH15Q96QU1 1955 aa8.21□□□□□ -1.1
PTCHD4-201ENST00000339488 MGST1P10620 155 aaKnown RBP8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 USF1P22415 310 aaPredicted RBP8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 Q0VG73 95 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 CBLN3Q6UW01 205 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 PRSS41Q7RTY9 318 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 ZNF295-AS1Q8N0V1 137 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 OR1F12Q8NHA8 337 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 DDIT4LQ96D03 193 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 LRRC3BQ96PB8 259 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 CITED1Q99966 193 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 UBE2ZQ9H832 354 aaPredicted RBP8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 ZNF835Q9Y2P0 537 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 LOC102723996A0A087X1L8 192 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 A0A0G2JRQ6 117 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 TMEM250H0YL14 139 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 K7EP34 96 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 MT-CO3P00414 261 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 FOXL1Q12952 345 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 MRPL54Q6P161 138 aaKnown RBP8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 LINC00173Q6ZV60 143 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 OR10G3Q8NGC4 313 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 TIMM8BQ9Y5J9 83 aaPredicted RBP8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 OR4C46A6NHA9 309 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 KLRC4-KLRK1H3BQV0 150 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 PDE6DO43924 150 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 CLDN14O95500 239 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 ADH5P11766 374 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 PRSS12P56730 875 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 RPS18P62269 152 aaKnown RBP8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 ROM1Q03395 351 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 TNXAQ16473 311 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 TMEM249Q2WGJ8 235 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 DCAF12Q5T6F0 453 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 SLC25A34Q6PIV7 304 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 APOBEC3DQ96AK3 386 aaPredicted RBP8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 FAM131CQ96AQ9 280 aa8.2□□□□□ -1.1
PTCHD4-201ENST00000339488 IGKV1D-43A0A0B4J1Z2 117 aa8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 C3orf85A0A1B0GTC6 90 aa8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 C17orf102A2RUQ5 167 aa8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 C5orf63A6NC05 138 aa8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 FAM181BA6NEQ2 426 aa8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 F2RL2O00254 374 aa8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 NEURL1O76050 574 aa8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 DLX2Q07687 328 aaPredicted RBP8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 PSG3Q16557 428 aa8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 OR2K2Q8NGT1 345 aa8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 OR2A1Q8NGT9 310 aa8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 CYB5D2Q8WUJ1 264 aa8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 MRAP2Q96G30 205 aa8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 KLF16Q9BXK1 252 aaPredicted RBP8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 C19orf53Q9UNZ5 99 aaPredicted RBP8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 WNT6Q9Y6F9 365 aa8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 B5MCH6 92 aa8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 M0R2Z0 102 aa8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 EN2P19622 333 aaPredicted RBP8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 CFHR2P36980 270 aa8.19□□□□□ -1.1
PTCHD4-201ENST00000339488 DAP3P51398 398 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms