RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 TPPP2P59282 170 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 CCL7P80098 99 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 LRRC10Q5BKY1 277 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 RPP25LQ8N5L8 163 aaKnown RBP4.74□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF709Q8N972 641 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF114Q8NC26 417 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 OR5D18Q8NGL1 313 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 BCL2L2Q92843 193 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-202ENST00000339438 PINX1Q96BK5 328 aaKnown RBP4.74□□□□□ -1.65
CSDE1-202ENST00000339438 ABHD14BQ96IU4 210 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 FAM71F1Q96KD3 344 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-202ENST00000339438 PBOV1Q9GZY1 135 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 OR10A2Q9H208 303 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 COA3Q9Y2R0 106 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-202ENST00000339438 LOC102723996A0A087X1L8 192 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 C17orf51A8MQB3 221 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 SERPINE3A8MV23 424 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 TMPRSS2O15393 492 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 RBFOX2O43251 390 aaKnown RBP eCLIP4.73□□□□□ -1.653e-6■■■■□ 22.3
CSDE1-202ENST00000339438 SSSCA1O60232 199 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 VENTXO95231 258 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 GYPAP02724 150 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 GDF1P27539 372 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF121P58317 390 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-202ENST00000339438 RPL27P61353 136 aaKnown RBP4.73□□□□□ -1.65
CSDE1-202ENST00000339438 IGLV3-21P80748 117 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-202ENST00000339438 ARL6IP1Q15041 203 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 PRTGQ2VWP7 1150 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 SNAI3Q3KNW1 292 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 WBP2NLQ6ICG8 309 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 Q6ZN92 141 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 OR5AU1Q8NGC0 362 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 OR5D14Q8NGL3 314 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 FGF21Q9NSA1 209 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 KLHL13Q9P2N7 655 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 RARRES3Q9UL19 164 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 SVILO95425 2214 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 PKD1L2Q7Z442 2459 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 TRBV20OR9-2A0A075B6H5 130 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 C5orf63A6NC05 138 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF891A8MT65 544 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-202ENST00000339438 RAMP3O60896 148 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 SMPD2O60906 423 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 GPR75O95800 540 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 CSTAP01040 98 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 PNMTP11086 282 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 RIPPLY3P57055 190 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 MSMO1Q15800 293 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 SMIM21Q3B7S5 101 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 UFSP1Q6NVU6 142 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 LCN15Q6UWW0 184 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 C6orf201Q7Z4U5 140 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-202ENST00000339438 LINC00346Q8IVM7 164 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 BCORP1Q8N888 145 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 TMEM234Q8WY98 164 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 PSMF1Q92530 271 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 SMIM12Q96EX1 92 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 RCHY1Q96PM5 261 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 PSMG3Q9BT73 122 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-202ENST00000339438 TMEM222Q9H0R3 208 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 LYRM4Q9HD34 91 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 SPACA6W5XKT8 324 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 ODAMA1E959 279 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 LIPT2A6NK58 231 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 CEBPZOSA8MTT3 80 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF737O75373 536 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 AGFG2O95081 481 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 REG1AP05451 166 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 HLA-DOBP13765 273 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 RRADP55042 308 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 FAM78BQ5VT40 261 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 CFAP161Q6P656 301 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 ERASQ7Z444 233 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 SPATA12Q7Z6I5 190 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 SELENOHQ8IZQ5 122 aaKnown RBP4.73□□□□□ -1.65
CSDE1-202ENST00000339438 OR5L1Q8NGL2 311 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 OR5P3Q8WZ94 311 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 AKIRIN1Q9H9L7 192 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-202ENST00000339438 CDC42EP3Q9UKI2 254 aa4.73□□□□□ -1.65
CSDE1-202ENST00000339438 ACACAQ13085 2346 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 DOCK11Q5JSL3 2073 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 OR2T8A6NH00 312 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 DIRC3C9JPN6 131 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 H0YJW9 148 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 CELA3BP08861 270 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 CLDN15P56746 228 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 FMODQ06828 376 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 Q0VFX4 171 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 GTF3C1Q12789 2109 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 SRSF6Q13247 344 aaKnown RBP4.72□□□□□ -1.65
CSDE1-202ENST00000339438 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.72□□□□□ -1.65
CSDE1-202ENST00000339438 PRR22Q8IZ63 422 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 PNKDQ8N490 385 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 GATSQ8NAP1 163 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 SGCZQ96LD1 299 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 OR5B12Q96R08 314 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 MEGF9Q9H1U4 602 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 TXNIPQ9H3M7 391 aa4.72□□□□□ -1.65
CSDE1-202ENST00000339438 HES4Q9HCC6 221 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms