RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 ZDHHC11Q9H8X9 412 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 ELOVL5Q9NYP7 299 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 WDR87Q6ZQQ6 2873 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 UMODP07911 640 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 CD82P27701 267 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 TPPP2P59282 170 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 TMEM183BQ1AE95 376 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 VAMP8Q9BV40 100 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 RYDENQ9NUL5 291 aaKnown RBP17.23■□□□□ 0.35
RUNX3-202ENST00000338888 KCNS2Q9ULS6 477 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 MUC3AQ02505 3323 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 SYNGR1O43759 233 aa17.22■□□□□ 0.35
RUNX3-202ENST00000338888 NDUFB4O95168 129 aa17.22■□□□□ 0.35
RUNX3-202ENST00000338888 WNT2P09544 360 aa17.22■□□□□ 0.35
RUNX3-202ENST00000338888 COX5AP20674 150 aa17.22■□□□□ 0.35
RUNX3-202ENST00000338888 PSMF1Q92530 271 aa17.22■□□□□ 0.35
RUNX3-202ENST00000338888 STRADBQ9C0K7 418 aa17.22■□□□□ 0.35
RUNX3-202ENST00000338888 CABIN1Q9Y6J0 2220 aa17.22■□□□□ 0.35
RUNX3-202ENST00000338888 WDR1O75083 606 aa17.22■□□□□ 0.35
RUNX3-202ENST00000338888 CCL3P10147 92 aa17.22■□□□□ 0.35
RUNX3-202ENST00000338888 ATP5G3P48201 142 aa17.22■□□□□ 0.35
RUNX3-202ENST00000338888 LINC00310P59036 64 aa17.22■□□□□ 0.35
RUNX3-202ENST00000338888 FOXL1Q12952 345 aa17.22■□□□□ 0.35
RUNX3-202ENST00000338888 RABEPKQ7Z6M1 372 aa17.22■□□□□ 0.35
RUNX3-202ENST00000338888 MKXQ8IYA7 352 aa17.22■□□□□ 0.35
RUNX3-202ENST00000338888 CPT1CQ8TCG5 803 aa17.22■□□□□ 0.35
RUNX3-202ENST00000338888 OR6C1Q96RD1 312 aa17.22■□□□□ 0.35
RUNX3-202ENST00000338888 TRAPPC6AO75865 159 aa17.21■□□□□ 0.35
RUNX3-202ENST00000338888 AAED1Q7RTV5 226 aa17.21■□□□□ 0.35
RUNX3-202ENST00000338888 FGFRL1Q8N441 504 aa17.21■□□□□ 0.35
RUNX3-202ENST00000338888 CPEB3Q8NE35 698 aaKnown RBP17.21■□□□□ 0.35
RUNX3-202ENST00000338888 RBFOX2O43251 390 aaKnown RBP eCLIP17.21■□□□□ 0.35
RUNX3-202ENST00000338888 SERF1AO75920 110 aa17.21■□□□□ 0.35
RUNX3-202ENST00000338888 C11orf42Q8N5U0 333 aa17.21■□□□□ 0.35
RUNX3-202ENST00000338888 PPIAL4AQ9Y536 164 aa17.21■□□□□ 0.35
RUNX3-202ENST00000338888 SCRG1O75711 98 aa17.2■□□□□ 0.34
RUNX3-202ENST00000338888 CD99P14209 185 aa17.2■□□□□ 0.34
RUNX3-202ENST00000338888 PAFAH1B2P68402 229 aa17.2■□□□□ 0.34
RUNX3-202ENST00000338888 OR1L1Q8NH94 360 aa17.2■□□□□ 0.34
RUNX3-202ENST00000338888 DNAJC4Q9NNZ3 241 aa17.2■□□□□ 0.34
RUNX3-202ENST00000338888 CLN8Q9UBY8 286 aa17.2■□□□□ 0.34
RUNX3-202ENST00000338888 CCL2P13500 99 aa17.2■□□□□ 0.34
RUNX3-202ENST00000338888 LIFP15018 202 aa17.2■□□□□ 0.34
RUNX3-202ENST00000338888 HNF1AP20823 631 aa17.2■□□□□ 0.34
RUNX3-202ENST00000338888 CBLN1P23435 193 aa17.2■□□□□ 0.34
RUNX3-202ENST00000338888 GNG10P50151 68 aa17.2■□□□□ 0.34
RUNX3-202ENST00000338888 SLC23A3Q6PIS1 610 aa17.2■□□□□ 0.34
RUNX3-202ENST00000338888 NUFIP2Q7Z417 695 aaKnown RBP17.2■□□□□ 0.34
RUNX3-202ENST00000338888 SPSB4Q96A44 273 aa17.2■□□□□ 0.34
RUNX3-202ENST00000338888 BTF3L4Q96K17 158 aa17.2■□□□□ 0.34
RUNX3-202ENST00000338888 TMEM147Q9BVK8 224 aa17.2■□□□□ 0.34
RUNX3-202ENST00000338888 RIMS4Q9H426 269 aaPredicted RBP17.2■□□□□ 0.34
RUNX3-202ENST00000338888 AKIRIN1Q9H9L7 192 aaPredicted RBP17.2■□□□□ 0.34
RUNX3-202ENST00000338888 RAB7AP51149 207 aa17.19■□□□□ 0.34
RUNX3-202ENST00000338888 DSCR4P56555 118 aaPredicted RBP17.19■□□□□ 0.34
RUNX3-202ENST00000338888 COL5A1-AS1Q5SY13 56 aa17.19■□□□□ 0.34
RUNX3-202ENST00000338888 SFRP2Q96HF1 295 aa17.19■□□□□ 0.34
RUNX3-202ENST00000338888 VPS13AQ96RL7 3174 aa17.19■□□□□ 0.34
RUNX3-202ENST00000338888 TRAV24A0A0B4J272 114 aa17.19■□□□□ 0.34
RUNX3-202ENST00000338888 IGHV3-9P01782 118 aa17.19■□□□□ 0.34
RUNX3-202ENST00000338888 RANP62826 216 aaKnown RBP17.19■□□□□ 0.34
RUNX3-202ENST00000338888 KMT5CQ86Y97 462 aa17.19■□□□□ 0.34
RUNX3-202ENST00000338888 C1QTNF5Q9BXJ0 243 aa17.19■□□□□ 0.34
RUNX3-202ENST00000338888 NPCDR1Q9BY65 106 aa17.19■□□□□ 0.34
RUNX3-202ENST00000338888 MSL2Q9HCI7 577 aa17.19■□□□□ 0.34
RUNX3-202ENST00000338888 YPEL3P61236 119 aaPredicted RBP17.18■□□□□ 0.34
RUNX3-202ENST00000338888 MSMO1Q15800 293 aa17.18■□□□□ 0.34
RUNX3-202ENST00000338888 ANKRD39Q53RE8 183 aa17.18■□□□□ 0.34
RUNX3-202ENST00000338888 SPEM1Q8N4L4 309 aa17.18■□□□□ 0.34
RUNX3-202ENST00000338888 ZNF709Q8N972 641 aa17.18■□□□□ 0.34
RUNX3-202ENST00000338888 OR5AU1Q8NGC0 362 aa17.18■□□□□ 0.34
RUNX3-202ENST00000338888 ZFP30Q9Y2G7 519 aa17.18■□□□□ 0.34
RUNX3-202ENST00000338888 TMPRSS2O15393 492 aa17.18■□□□□ 0.34
RUNX3-202ENST00000338888 GLB1P16278 677 aa17.18■□□□□ 0.34
RUNX3-202ENST00000338888 CRISP2P16562 243 aa17.18■□□□□ 0.34
RUNX3-202ENST00000338888 LHX2P50458 406 aa17.18■□□□□ 0.34
RUNX3-202ENST00000338888 RAC1P63000 192 aa17.18■□□□□ 0.34
RUNX3-202ENST00000338888 CADM4Q8NFZ8 388 aa17.18■□□□□ 0.34
RUNX3-202ENST00000338888 PROK2Q9HC23 129 aa17.18■□□□□ 0.34
RUNX3-202ENST00000338888 ASCL3Q9NQ33 180 aa17.18■□□□□ 0.34
RUNX3-202ENST00000338888 LIN7CQ9NUP9 197 aaKnown RBP17.18■□□□□ 0.34
RUNX3-202ENST00000338888 MDFIC2A0A1B0GVS7 189 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 F2Z2F3 143 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 CHRNB4P30926 498 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 CDC34P49427 236 aaPredicted RBP17.17■□□□□ 0.34
RUNX3-202ENST00000338888 PCBD1P61457 104 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 SAXO1Q8IYX7 474 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 OR5A2Q8NGI9 324 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 GUCD1Q96NT3 240 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 SF3B5Q9BWJ5 86 aaKnown RBP17.17■□□□□ 0.34
RUNX3-202ENST00000338888 KITLGP21583 273 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 THBS3P49746 956 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 SELENOTP62341 195 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 MMDQ15546 238 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 CEACAM21Q3KPI0 293 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 GCSAMLQ5JQS6 135 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 OR10P1Q8NGE3 313 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 SAMD10Q9BYL1 202 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 LRP5LA4QPB2 252 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 PDE6DO43924 150 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms