RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ZNF486Q96H40 463 aaPredicted RBP17.46■□□□□ 0.39
TPM1-204ENST00000334895 BEX2Q9BXY8 128 aa17.46■□□□□ 0.39
TPM1-204ENST00000334895 BEX1Q9HBH7 125 aa17.46■□□□□ 0.39
TPM1-204ENST00000334895 ZNF221Q9UK13 617 aa17.46■□□□□ 0.39
TPM1-204ENST00000334895 INMT-MINDY4F8WBC2 141 aa17.45■□□□□ 0.38
TPM1-204ENST00000334895 BUB1B-PAK6H3BSN5 160 aa17.45■□□□□ 0.38
TPM1-204ENST00000334895 RAB29O14966 203 aa17.45■□□□□ 0.38
TPM1-204ENST00000334895 TNFSF12O43508 249 aa17.45■□□□□ 0.38
TPM1-204ENST00000334895 FOSL1P15407 271 aa17.45■□□□□ 0.38
TPM1-204ENST00000334895 MSMO1Q15800 293 aa17.45■□□□□ 0.38
TPM1-204ENST00000334895 AKR1E2Q96JD6 320 aa17.45■□□□□ 0.38
TPM1-204ENST00000334895 PIPOXQ9P0Z9 390 aa17.45■□□□□ 0.38
TPM1-204ENST00000334895 C14orf166Q9Y224 244 aaKnown RBP17.45■□□□□ 0.38
TPM1-204ENST00000334895 TRAV40A0A0B4J280 105 aa17.44■□□□□ 0.38
TPM1-204ENST00000334895 A0A0B4J293 547 aa17.44■□□□□ 0.38
TPM1-204ENST00000334895 LY6LH3BQJ8 138 aa17.44■□□□□ 0.38
TPM1-204ENST00000334895 PEX14O75381 377 aa17.44■□□□□ 0.38
TPM1-204ENST00000334895 SLC22A5O76082 557 aa17.44■□□□□ 0.38
TPM1-204ENST00000334895 IGHV4-38-2P0DP08 117 aa17.44■□□□□ 0.38
TPM1-204ENST00000334895 LINC00205P59089 165 aa17.44■□□□□ 0.38
TPM1-204ENST00000334895 ABCA11PQ4W5N1 156 aa17.44■□□□□ 0.38
TPM1-204ENST00000334895 KLF17Q5JT82 389 aaPredicted RBP17.44■□□□□ 0.38
TPM1-204ENST00000334895 ZNF833PQ6ZTB9 187 aa17.44■□□□□ 0.38
TPM1-204ENST00000334895 LHFPL4Q7Z7J7 247 aa17.44■□□□□ 0.38
TPM1-204ENST00000334895 SLC25A42Q86VD7 318 aa17.44■□□□□ 0.38
TPM1-204ENST00000334895 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.44■□□□□ 0.38
TPM1-204ENST00000334895 IGHV3OR16-10A0A075B7F0 116 aa17.43■□□□□ 0.38
TPM1-204ENST00000334895 PGLYRP1O75594 196 aaPredicted RBP17.43■□□□□ 0.38
TPM1-204ENST00000334895 AKR1C4P17516 323 aa17.43■□□□□ 0.38
TPM1-204ENST00000334895 RND3P61587 244 aa17.43■□□□□ 0.38
TPM1-204ENST00000334895 ZBTB34Q8NCN2 500 aa17.43■□□□□ 0.38
TPM1-204ENST00000334895 GHITMQ9H3K2 345 aa17.43■□□□□ 0.38
TPM1-204ENST00000334895 RAG2P55895 527 aa17.43■□□□□ 0.38
TPM1-204ENST00000334895 RPL30P62888 115 aaKnown RBP17.43■□□□□ 0.38
TPM1-204ENST00000334895 SUPT4H1P63272 117 aaKnown RBP17.43■□□□□ 0.38
TPM1-204ENST00000334895 DHODHQ02127 395 aa17.43■□□□□ 0.38
TPM1-204ENST00000334895 CMTM1Q8IZ96 169 aa17.43■□□□□ 0.38
TPM1-204ENST00000334895 PIP4P2Q8N4L2 257 aa17.43■□□□□ 0.38
TPM1-204ENST00000334895 C17orf50Q8WW18 174 aa17.43■□□□□ 0.38
TPM1-204ENST00000334895 RTN4IP1Q8WWV3 396 aaPredicted RBP17.43■□□□□ 0.38
TPM1-204ENST00000334895 AJUBAQ96IF1 538 aa17.43■□□□□ 0.38
TPM1-204ENST00000334895 GSX1Q9H4S2 264 aaPredicted RBP17.43■□□□□ 0.38
TPM1-204ENST00000334895 IGHV1-69DA0A0B4J2H0 117 aa17.42■□□□□ 0.38
TPM1-204ENST00000334895 M0R1X1 148 aa17.42■□□□□ 0.38
TPM1-204ENST00000334895 CD5LO43866 347 aa17.42■□□□□ 0.38
TPM1-204ENST00000334895 IGHV1-69P01742 117 aa17.42■□□□□ 0.38
TPM1-204ENST00000334895 REG1BP48304 166 aa17.42■□□□□ 0.38
TPM1-204ENST00000334895 PPP1R1AQ13522 171 aa17.42■□□□□ 0.38
TPM1-204ENST00000334895 RUSC1-AS1Q66K80 236 aa17.42■□□□□ 0.38
TPM1-204ENST00000334895 TBC1D26Q86UD7 250 aa17.42■□□□□ 0.38
TPM1-204ENST00000334895 DRAXINQ8NBI3 349 aaPredicted RBP17.42■□□□□ 0.38
TPM1-204ENST00000334895 ALX4Q9H161 411 aaPredicted RBP17.42■□□□□ 0.38
TPM1-204ENST00000334895 AMMECR1Q9Y4X0 333 aaPredicted RBP17.42■□□□□ 0.38
TPM1-204ENST00000334895 CRYM-AS1A6NIL9 109 aa17.41■□□□□ 0.38
TPM1-204ENST00000334895 LINC00473A8K010 186 aa17.41■□□□□ 0.38
TPM1-204ENST00000334895 MPPED1O15442 326 aa17.41■□□□□ 0.38
TPM1-204ENST00000334895 OR4E1P0C645 316 aa17.41■□□□□ 0.38
TPM1-204ENST00000334895 HTR1DP28221 377 aa17.41■□□□□ 0.38
TPM1-204ENST00000334895 DUTP33316 252 aaKnown RBP17.41■□□□□ 0.38
TPM1-204ENST00000334895 TMEM128Q5BJH2 165 aa17.41■□□□□ 0.38
TPM1-204ENST00000334895 Q6ZNX1 250 aa17.41■□□□□ 0.38
TPM1-204ENST00000334895 S1PR3Q99500 378 aa17.41■□□□□ 0.38
TPM1-204ENST00000334895 NPFFO15130 113 aa17.4■□□□□ 0.38
TPM1-204ENST00000334895 FSHBP01225 129 aa17.4■□□□□ 0.38
TPM1-204ENST00000334895 CT45A6P0DMU7 189 aa17.4■□□□□ 0.38
TPM1-204ENST00000334895 CT45A5P0DMU8 189 aa17.4■□□□□ 0.38
TPM1-204ENST00000334895 CT45A7P0DMV0 189 aa17.4■□□□□ 0.38
TPM1-204ENST00000334895 IL3RAP26951 378 aa17.4■□□□□ 0.38
TPM1-204ENST00000334895 SAA4P35542 130 aa17.4■□□□□ 0.38
TPM1-204ENST00000334895 TAS2R31P59538 309 aa17.4■□□□□ 0.38
TPM1-204ENST00000334895 FAM71F2Q6NXP2 309 aa17.4■□□□□ 0.38
TPM1-204ENST00000334895 CCDC71LQ8N9Z2 235 aa17.4■□□□□ 0.38
TPM1-204ENST00000334895 SEC22CQ9BRL7 303 aa17.4■□□□□ 0.38
TPM1-204ENST00000334895 MRPL20Q9BYC9 149 aaKnown RBP17.4■□□□□ 0.38
TPM1-204ENST00000334895 NAA60Q9H7X0 242 aa17.4■□□□□ 0.38
TPM1-204ENST00000334895 DPM3Q9P2X0 92 aa17.4■□□□□ 0.38
TPM1-204ENST00000334895 LY6G6DO95868 133 aa17.39■□□□□ 0.38
TPM1-204ENST00000334895 PAX6P26367 422 aa17.39■□□□□ 0.38
TPM1-204ENST00000334895 MIDNQ504T8 468 aa17.39■□□□□ 0.38
TPM1-204ENST00000334895 TPTE2P1Q5T6R2 138 aa17.39■□□□□ 0.38
TPM1-204ENST00000334895 GPR157Q5UAW9 335 aa17.39■□□□□ 0.38
TPM1-204ENST00000334895 BRD3OSQ6XYD6 125 aa17.39■□□□□ 0.38
TPM1-204ENST00000334895 DYNAPQ8N1N2 210 aa17.39■□□□□ 0.38
TPM1-204ENST00000334895 OR52B4Q8NGK2 314 aa17.39■□□□□ 0.38
TPM1-204ENST00000334895 OR51H1Q8NH63 302 aa17.39■□□□□ 0.38
TPM1-204ENST00000334895 TBL2Q9Y4P3 447 aaKnown RBP17.39■□□□□ 0.38
TPM1-204ENST00000334895 LEUTXA8MZ59 168 aa17.39■□□□□ 0.37
TPM1-204ENST00000334895 BRWD1-AS2P59051 145 aa17.39■□□□□ 0.37
TPM1-204ENST00000334895 UBE2MP61081 183 aaKnown RBP17.39■□□□□ 0.37
TPM1-204ENST00000334895 DHRS2Q13268 280 aa17.39■□□□□ 0.37
TPM1-204ENST00000334895 TATDN3Q17R31 274 aa17.39■□□□□ 0.37
TPM1-204ENST00000334895 MINOS1Q5TGZ0 78 aa17.39■□□□□ 0.37
TPM1-204ENST00000334895 CLEC9AQ6UXN8 241 aa17.39■□□□□ 0.37
TPM1-204ENST00000334895 GLDNQ6ZMI3 551 aaPredicted RBP17.39■□□□□ 0.37
TPM1-204ENST00000334895 ZNF66Q6ZN08 573 aa17.39■□□□□ 0.37
TPM1-204ENST00000334895 Q71RC1 249 aaPredicted RBP17.39■□□□□ 0.37
TPM1-204ENST00000334895 ZNF383Q8NA42 475 aa17.39■□□□□ 0.37
TPM1-204ENST00000334895 RBMXL1Q96E39 390 aaKnown RBP17.39■□□□□ 0.37
TPM1-204ENST00000334895 TP53RKQ96S44 253 aa17.39■□□□□ 0.37
TPM1-204ENST00000334895 HSD17B10Q99714 261 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms